Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 1.6e-106 389.4 199 100.0
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 2.2e-79 299.3 197 78.2
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 2.2e-79 299.3 187 77.0
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 2.7e-77 292.4 204 75.5
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 1.6e-74 283.1 191 73.8
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 2.0e-72 276.2 194 73.7
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 1.3e-71 273.5 191 70.2
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 2.5e-70 269.2 192 68.8
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 4.2e-70 268.5 193 72.0
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 2.7e-69 265.8 190 70.5
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 7.9e-69 264.2 190 69.5
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 2.3e-68 262.7 187 69.5
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 1.5e-67 260.0 171 70.8
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 2.5e-67 259.2 187 68.4
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 2.5e-67 259.2 191 69.6
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 4.3e-67 258.5 191 67.0
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 5.7e-67 258.1 186 69.9
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 5.7e-67 258.1 199 69.8
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 7.4e-67 257.7 183 71.6
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 9.7e-67 257.3 186 70.4
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.6e-66 256.5 192 68.2
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 1.6e-66 256.5 191 66.5
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 2.8e-66 255.8 195 69.2
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 2.8e-66 255.8 192 66.7
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 2.8e-66 255.8 202 67.8
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 3.7e-66 255.4 191 66.0
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 3.7e-66 255.4 191 68.1
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 4.8e-66 255.0 191 68.1
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 4.8e-66 255.0 191 66.5
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 1.4e-65 253.4 185 68.6
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 1.4e-65 253.4 164 72.6
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.8e-65 253.1 191 66.0
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 1.8e-65 253.1 186 68.8
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 2.4e-65 252.7 191 65.4
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 3.1e-65 252.3 197 65.0
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 4.1e-65 251.9 186 68.8
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 5.3e-65 251.5 191 64.9
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 5.3e-65 251.5 192 66.7
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 5.3e-65 251.5 185 69.7
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 6.9e-65 251.1 197 65.5
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 1.2e-64 250.4 191 66.0
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 2.6e-64 249.2 186 67.2
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 5.9e-64 248.1 186 66.1
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 1.7e-63 246.5 191 64.4
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 2.9e-63 245.7 191 66.5
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 1.1e-62 243.8 193 63.7
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 1.4e-62 243.4 184 66.3
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 4.2e-62 241.9 187 63.6
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 4.2e-62 241.9 188 64.9
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 7.2e-62 241.1 187 63.6
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 9.4e-62 240.7 149 75.8
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 2.1e-61 239.6 168 69.6
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 4.6e-61 238.4 189 65.1
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 1.4e-60 236.9 184 64.1
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 1.8e-60 236.5 192 64.6
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 1.8e-60 236.5 186 66.1
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 2.3e-60 236.1 189 63.0
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 3.0e-60 235.7 166 69.3
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 3.9e-60 235.3 191 60.7
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 5.1e-60 235.0 191 64.4
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 6.7e-60 234.6 191 64.9
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 6.7e-60 234.6 186 65.1
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 2.6e-59 232.6 181 66.9
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 4.4e-59 231.9 201 60.7
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 9.7e-59 230.7 198 63.1
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 6.3e-58 228.0 178 61.8
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 1.4e-57 226.9 197 60.4
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 1.8e-57 226.5 192 63.5
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 2.4e-57 226.1 194 62.4
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.0e-56 223.0 170 61.2
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 4.5e-56 221.9 297 45.8
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 5.9e-56 221.5 171 62.6
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 1.7e-55 219.9 160 64.4
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 2.2e-55 219.5 201 60.2
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 5.0e-55 218.4 192 60.9
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 8.5e-55 217.6 191 58.6
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 1.4e-54 216.9 191 58.1
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 9.4e-54 214.2 191 57.6
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 7.9e-53 211.1 191 60.2
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 1.1e-51 207.2 179 59.2
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 2.6e-51 206.1 172 59.9
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 2.6e-51 206.1 179 59.2
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 5.7e-51 204.9 178 60.7
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 5.7e-51 204.9 189 56.1
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 5.7e-51 204.9 189 56.1
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 5.7e-51 204.9 189 56.1
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 9.7e-51 204.1 160 59.4
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.3e-50 203.8 175 59.4
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.7e-50 202.2 189 60.8
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 6.3e-50 201.4 187 57.8
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 6.3e-50 201.4 191 57.1
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 8.2e-50 201.1 152 61.8
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 3.1e-49 199.1 192 54.2
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 9.1e-49 197.6 164 61.0
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 1.2e-48 197.2 192 55.7
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 5.0e-47 191.8 187 49.2
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 3.3e-43 179.1 128 69.5
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 3.1e-41 172.6 128 68.8
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 2.2e-39 166.4 123 56.9
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 1.9e-38 163.3 110 71.8
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 7.2e-38 161.4 193 45.1
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 7.2e-38 161.4 139 53.2
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 6.8e-36 154.8 92 78.3
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 4.4e-35 152.1 113 64.6
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 7.0e-33 144.8 120 57.5
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 1.2e-32 144.1 109 64.2
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 2.0e-24 116.7 143 43.4
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 3.5e-24 115.9 103 52.4
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 2.8e-21 106.3 79 63.3
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 4.4e-19 99.0 132 41.7
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 1.2e-16 90.9 195 35.4
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 1.6e-13 80.5 125 36.0
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 4.9e-10 68.9 72 48.6
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 8.3e-10 68.2 65 58.5
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 8.6e-07 58.2 159 23.3


User provided reference genes

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