Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0944 Trochodendron aralioides HOM05D000716 ORTHO05D010254 9.0e-90 333.6 169 100.0
TAR623G0004 Trochodendron aralioides HOM05D000716 ORTHO05D010254 2.5e-55 219.2 145 75.9
Dinv28653 Davidia involucrata HOM05D000716 ORTHO05D010254 1.8e-50 203.0 162 67.9
GSVIVG01024723001 Vitis vinifera HOM05D000716 ORTHO05D010254 9.4e-47 190.7 160 62.5
Nn2g13150 Nelumbo nucifera HOM05D000716 ORTHO05D010254 1.6e-46 189.9 145 65.5
MBI15_g00083_MAGBIO Magnolia biondii HOM05D000716 ORTHO05D010254 2.6e-44 182.6 148 61.5
Actinidia23230 Actinidia chinensis HOM05D000716 ORTHO05D010254 3.7e-43 178.7 135 66.7
Hma1.2p1_0146F.1_g065670 Hydrangea macrophylla HOM05D000716 ORTHO05D010254 4.8e-43 178.3 140 65.7
Rhsim01G0237100 Rhododendron simsii HOM05D000716 ORTHO05D010254 4.1e-42 175.3 136 64.7
CSS0012573 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D010254 4.5e-41 171.8 138 64.5
Sc12g0000620 Simmondsia chinensis HOM05D000716 ORTHO05D010254 4.5e-41 171.8 159 57.2
vmacro14599 Vaccinium macrocarpon HOM05D000716 ORTHO05D010254 2.9e-40 169.1 136 61.0
Aqoxy2G00868 Aquilegia oxysepala HOM05D000716 ORTHO05D010254 3.6e-38 162.2 175 53.7
PSO801G0290 Papaver somniferum HOM05D000716 ORTHO05D010254 1.0e-37 160.6 139 64.0
PSO339G5663 Papaver somniferum HOM05D000716 ORTHO05D010254 3.0e-37 159.1 139 63.3
AUR62001630 Chenopodium quinoa HOM05D000716 ORTHO05D010254 8.9e-37 157.5 136 58.1
AUR62020149 Chenopodium quinoa HOM05D000716 ORTHO05D010254 5.7e-36 154.8 136 56.6
Cc01_g14350 Coffea canephora HOM05D000716 ORTHO05D010254 3.7e-35 152.1 138 57.2
Hund18840 Selenicereus undatus HOM05D000716 ORTHO05D010254 4.9e-35 151.8 138 54.3
Ah.08g221420 Amaranthus hybridus HOM05D000716 ORTHO05D010254 6.3e-35 151.4 137 57.7
arahy.Tifrunner.gnm1.ann1.K9N9KI Arachis hypogaea HOM05D000716 ORTHO05D010254 4.1e-34 148.7 160 50.6
CiPaw.13G076200 Carya illinoinensis HOM05D000716 ORTHO05D010254 2.7e-33 146.0 140 58.6
EL10Ac7g16186 Beta vulgaris HOM05D000716 ORTHO05D010254 1.3e-32 143.7 137 53.3
Cfa011710 Carpinus fangiana HOM05D000716 ORTHO05D010254 2.9e-32 142.5 162 51.9
arahy.Tifrunner.gnm1.ann1.EQ31PG Arachis hypogaea HOM05D000716 ORTHO05D010254 5.0e-32 141.7 152 50.0
Haze_24341 Corylus avellana HOM05D000716 ORTHO05D010254 5.0e-32 141.7 136 57.4
Manes.01G160501 Manihot esculenta HOM05D000716 ORTHO05D010254 5.0e-32 141.7 151 53.6
Thecc.09G299700 Theobroma cacao HOM05D000716 ORTHO05D010254 8.0e-30 134.4 157 48.4
MD11G1072100 Malus domestica HOM05D000716 ORTHO05D010254 1.0e-29 134.0 159 48.4
COL.COLO4_19175 Corchorus olitorius HOM05D000716 ORTHO05D010254 1.8e-29 133.3 157 47.8
PGR102G1779 Punica granatum HOM05D000716 ORTHO05D010254 2.3e-29 132.9 161 48.4
Gohir.A09G089700 Gossypium hirsutum HOM05D000716 ORTHO05D010254 3.1e-29 132.5 131 51.1
Gohir.D09G089800 Gossypium hirsutum HOM05D000716 ORTHO05D010254 4.0e-29 132.1 131 51.1
Gohir.D05G088800 Gossypium hirsutum HOM05D000716 ORTHO05D010254 5.2e-29 131.7 157 49.7
Gorai.009G091000 Gossypium raimondii HOM05D000716 ORTHO05D010254 5.2e-29 131.7 157 49.7
Gohir.A05G087700 Gossypium hirsutum HOM05D000716 ORTHO05D010254 6.8e-29 131.3 157 47.8
Gorai.006G106000 Gossypium raimondii HOM05D000716 ORTHO05D010254 8.9e-29 131.0 131 51.1
RcHm_v2.0_Chr5g0069981 Rosa chinensis HOM05D000716 ORTHO05D010254 1.5e-28 130.2 161 50.3
Prupe.6G055800 Prunus persica HOM05D000716 ORTHO05D010254 2.0e-28 129.8 159 48.4
QL01p038629 Quercus lobata HOM05D000716 ORTHO05D010254 2.0e-28 129.8 162 46.3
FvH4_3g38800 Fragaria vesca HOM05D000716 ORTHO05D010254 4.9e-27 125.2 162 48.8
FAN11G3890 Fragaria x ananassa HOM05D000716 ORTHO05D010254 4.9e-27 125.2 162 48.8
Ciclev10029840m.g Citrus clementina HOM05D000716 ORTHO05D010254 4.6e-25 118.6 137 51.1
FAN25G3189 Fragaria x ananassa HOM05D000716 ORTHO05D010254 4.6e-25 118.6 161 47.2
VMungo0540G0542 Vigna mungo HOM05D000716 ORTHO05D010254 6.0e-25 118.2 141 46.8
ATR0681G344 Amborella trichopoda HOM05D000716 ORTHO05D010254 1.0e-24 117.5 132 47.0
Glyma.18G061900 Glycine max HOM05D000716 ORTHO05D010254 3.3e-23 112.5 142 47.9
Eucgr.B02247 Eucalyptus grandis HOM05D000716 ORTHO05D010254 5.6e-23 111.7 130 46.9
SEGI_13601 Sequoiadendron giganteum HOM05D000716 ORTHO05D010254 6.2e-22 108.2 132 43.2
FAN21G4021 Fragaria x ananassa HOM05D000716 ORTHO05D010254 1.4e-13 80.5 85 54.1
DCAR_018951 Daucus carota HOM05D000716 ORTHO05D010254 1.9e-10 70.1 75 49.3
PGR042G0474 Punica granatum HOM05D000716 ORTHO05D004822 6.6e-08 61.6 134 32.8
AagrBONN_evm.TU.Sc2ySwM_228.2518 Anthoceros agrestis HOM05D000716 ORTHO05D004822 5.6e-07 58.5 141 26.2
Mapoly0036s0132 Marchantia polymorpha HOM05D000716 ORTHO05D004822 5.6e-07 58.5 139 25.9
AagrBONN_evm.TU.Sc2ySwM_228.4193 Anthoceros agrestis HOM05D000716 ORTHO05D002658 7.3e-07 58.2 150 27.3
Glyma.06G132100 Glycine max HOM05D000716 ORTHO05D004822 9.5e-07 57.8 112 32.1
Pp3c14_22370 Physcomitrium patens HOM05D000716 ORTHO05D010254 1.2e-06 57.4 114 28.9
Sopen09g031940 Solanum pennellii HOM05D000716 ORTHO05D009512 2.8e-06 56.2 118 28.0
CiPaw.05G200600 Carya illinoinensis HOM05D000716 ORTHO05D004822 3.6e-06 55.8 133 30.1
Solyc09g083060.4 Solanum lycopersicum HOM05D000716 ORTHO05D009512 4.7e-06 55.5 118 27.1


User provided reference genes

Program Settings