Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0911 Trochodendron aralioides HOM05D000108 ORTHO05D001378 3.7e-287 991.1 609 100.0
TAR636G0209 Trochodendron aralioides HOM05D000108 ORTHO05D001378 1.8e-148 530.4 465 65.6
Nn2g14427 Nelumbo nucifera HOM05D000108 ORTHO05D001378 2.5e-134 483.4 610 51.5
Dinv32148 Davidia involucrata HOM05D000108 ORTHO05D001378 2.1e-133 480.3 692 46.5
CSS0042983 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 2.5e-126 456.8 636 53.9
vmacro14307 Vaccinium macrocarpon HOM05D000108 ORTHO05D001378 1.2e-123 448.0 593 49.6
Rhsim01G0198400 Rhododendron simsii HOM05D000108 ORTHO05D001378 7.7e-123 445.3 574 50.5
Cfa010218 Carpinus fangiana HOM05D000108 ORTHO05D001378 3.8e-122 443.0 646 45.4
Prupe.6G149000 Prunus persica HOM05D000108 ORTHO05D001378 1.9e-121 440.7 626 48.1
QL01p018894 Quercus lobata HOM05D000108 ORTHO05D001378 7.9e-120 435.3 672 45.7
Actinidia22458 Actinidia chinensis HOM05D000108 ORTHO05D001378 2.0e-118 430.6 685 43.6
Lj2A835T19 Lonicera japonica HOM05D000108 ORTHO05D001378 9.4e-113 411.8 612 44.1
MD11G1176500 Malus domestica HOM05D000108 ORTHO05D001378 1.8e-111 407.5 615 45.0
Haze_23605 Corylus avellana HOM05D000108 ORTHO05D001378 6.3e-109 399.1 737 40.0
MD03G1160900 Malus domestica HOM05D000108 ORTHO05D001378 6.3e-109 399.1 599 46.2
CiPaw.13G125600 Carya illinoinensis HOM05D000108 ORTHO05D001378 1.8e-108 397.5 673 42.6
RcHm_v2.0_Chr5g0049231 Rosa chinensis HOM05D000108 ORTHO05D001378 1.5e-105 387.9 679 41.8
MBI05_g27524_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D001378 1.6e-104 384.4 652 41.6
Cpa.g.sc103.41 Carica papaya HOM05D000108 ORTHO05D001378 1.4e-103 381.3 648 41.8
Aqoxy2G00635 Aquilegia oxysepala HOM05D000108 ORTHO05D001378 6.7e-103 379.0 597 42.4
Thecc.09G269500 Theobroma cacao HOM05D000108 ORTHO05D001378 5.7e-102 375.9 601 43.8
Gorai.009G081900 Gossypium raimondii HOM05D000108 ORTHO05D001378 1.7e-101 374.4 618 43.0
Glyma.12G191000 Glycine max HOM05D000108 ORTHO05D001378 2.2e-101 374.0 576 44.6
FAN21G0222 Fragaria x ananassa HOM05D000108 ORTHO05D001378 4.1e-100 369.8 686 40.2
FAN16G2246 Fragaria x ananassa HOM05D000108 ORTHO05D001378 9.1e-100 368.6 686 39.9
Glyma.13G310700 Glycine max HOM05D000108 ORTHO05D001378 1.2e-99 368.2 583 43.7
Manes.04G063200 Manihot esculenta HOM05D000108 ORTHO05D001378 3.5e-99 366.7 606 43.4
FvH4_3g26820 Fragaria vesca HOM05D000108 ORTHO05D001378 4.5e-99 366.3 687 40.2
Gohir.D05G080200 Gossypium hirsutum HOM05D000108 ORTHO05D001378 5.9e-99 365.9 508 48.0
Gohir.A05G077400 Gossypium hirsutum HOM05D000108 ORTHO05D001378 1.7e-98 364.4 588 43.4
PGR102G2325 Punica granatum HOM05D000108 ORTHO05D001378 2.9e-98 363.6 590 43.2
VMungo1080G1113 Vigna mungo HOM05D000108 ORTHO05D001378 6.5e-98 362.5 585 43.1
FAN11G2165 Fragaria x ananassa HOM05D000108 ORTHO05D001378 8.5e-98 362.1 687 39.9
FAN25G1370 Fragaria x ananassa HOM05D000108 ORTHO05D001378 2.5e-97 360.5 686 39.7
PSO384G4884 Papaver somniferum HOM05D000108 ORTHO05D001378 9.4e-97 358.6 581 43.5
PSO339G5089 Papaver somniferum HOM05D000108 ORTHO05D001378 1.4e-95 354.8 558 51.1
Atru.chr3.3051 Acer truncatum HOM05D000108 ORTHO05D001378 1.8e-95 354.4 638 41.2
CsaV3_1G004510 Cucumis sativus L. HOM05D000108 ORTHO05D001378 5.2e-95 352.8 618 40.3
Duzib150G0790 Durio zibethinus HOM05D000108 ORTHO05D001378 6.8e-95 352.4 588 42.5
Hund20965 Selenicereus undatus HOM05D000108 ORTHO05D001378 5.7e-94 349.4 532 45.3
Duzib168G2250 Durio zibethinus HOM05D000108 ORTHO05D001378 7.5e-94 349.0 600 42.3
Phvul.005G117200 Phaseolus vulgaris HOM05D000108 ORTHO05D001378 7.5e-94 349.0 583 42.4
GSVIVG01037540001 Vitis vinifera HOM05D000108 ORTHO05D001378 9.8e-94 348.6 437 51.9
MELO3C017377.2 Cucumis melo HOM05D000108 ORTHO05D001378 2.2e-93 347.4 616 40.6
TWI79G1662 Tripterygium wilfordii HOM05D000108 ORTHO05D001378 6.3e-93 345.9 665 39.2
Sed0019972 Sechium edule HOM05D000108 ORTHO05D001378 1.8e-92 344.4 598 41.1
ClCG06G014170 Citrullus lanatus HOM05D000108 ORTHO05D001378 1.2e-91 341.7 656 38.4
Atru.chr3.3060 Acer truncatum HOM05D000108 ORTHO05D001378 2.9e-90 337.0 638 40.1
arahy.Tifrunner.gnm1.ann1.GT6U7J Arachis hypogaea HOM05D000108 ORTHO05D001378 1.5e-89 334.7 581 41.8
Ciclev10027695m.g Citrus clementina HOM05D000108 ORTHO05D001378 2.5e-89 334.0 564 40.1
arahy.Tifrunner.gnm1.ann1.12RI9F Arachis hypogaea HOM05D000108 ORTHO05D001378 1.2e-88 331.6 581 41.3
Lalb_Chr24g0393321 Lupinus albus HOM05D000108 ORTHO05D001378 2.8e-88 330.5 573 43.5
Cc01_g08000 Coffea canephora HOM05D000108 ORTHO05D001378 1.8e-87 327.8 588 41.8
Potri.009G156000 Populus trichocarpa HOM05D000108 ORTHO05D001378 8.8e-87 325.5 610 41.0
Eucgr.B03797 Eucalyptus grandis HOM05D000108 ORTHO05D001378 5.7e-86 322.8 711 36.3
EL10Ac7g16261 Beta vulgaris HOM05D000108 ORTHO05D001378 8.3e-85 318.9 649 37.6
CSS0001215 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 1.1e-84 318.5 457 48.1
Migut.O00548 Erythranthe guttata HOM05D000108 ORTHO05D001378 1.4e-84 318.2 633 36.0
AUR62020199 Chenopodium quinoa HOM05D000108 ORTHO05D001378 1.8e-84 317.8 543 41.8
Peaxi162Scf00259g00125 Petunia axillaris HOM05D000108 ORTHO05D001378 2.4e-84 317.4 580 39.7
Oeu048817.1 Olea europaea HOM05D000108 ORTHO05D001378 3.1e-84 317.0 639 37.6
CANSAT54G0196 Cannabis sativa HOM05D000108 ORTHO05D001378 1.2e-83 315.1 611 37.5
Migut.D02460 Erythranthe guttata HOM05D000108 ORTHO05D001378 1.2e-83 315.1 633 36.2
Ah.15g099080 Amaranthus hybridus HOM05D000108 ORTHO05D001378 5.0e-82 309.7 524 43.1
AUR62001584 Chenopodium quinoa HOM05D000108 ORTHO05D001378 5.0e-82 309.7 567 39.5
THA.LOC104810947 Tarenaya hassleriana HOM05D000108 ORTHO05D001378 8.6e-82 308.9 573 38.9
Ca_01618_v3 Cicer arietinum L. HOM05D000108 ORTHO05D001378 1.2e-80 305.1 568 40.8
Sabra09G0122300 Salix brachista HOM05D000108 ORTHO05D001378 1.2e-80 305.1 607 39.2
Medtr2g087840 Medicago truncatula HOM05D000108 ORTHO05D001378 3.4e-78 297.0 576 39.8
Sabra04G0131900 Salix brachista HOM05D000108 ORTHO05D001378 3.2e-76 290.4 588 38.1
MSTRG.18801 Avicennia marina HOM05D000108 ORTHO05D001378 7.0e-76 289.3 664 39.5
Lsat_1_v5_gn_2_38920 Lactuca sativa HOM05D000108 ORTHO05D001378 7.0e-76 289.3 487 42.3
Nitab4.5_0002498g0040 Nicotiana tabacum HOM05D000108 ORTHO05D001378 1.2e-75 288.5 577 37.1
Carub.0005s0979 Capsella rubella HOM05D000108 ORTHO05D001378 1.9e-73 281.2 467 41.5
Sp5g17250 Schrenkiella parvula HOM05D000108 ORTHO05D001378 5.6e-73 279.6 557 37.3
PGSC0003DMG400003008 Solanum tuberosum HOM05D000108 ORTHO05D001378 1.2e-72 278.5 570 37.7
Sopen11g029400 Solanum pennellii HOM05D000108 ORTHO05D001378 1.6e-72 278.1 571 39.4
A06p22220 Brassica napus HOM05D000108 ORTHO05D001378 4.7e-72 276.6 560 37.1
ECA238G3279 Erigeron canadensis HOM05D000108 ORTHO05D001378 1.1e-71 275.4 565 36.3
BraA06t25310Z Brassica rapa HOM05D000108 ORTHO05D001378 1.4e-71 275.0 555 37.1
BcaC01g02082 Brassica carinata HOM05D000108 ORTHO05D001378 1.8e-71 274.6 469 40.7
COL.COLO4_25387 Corchorus olitorius HOM05D000108 ORTHO05D001378 2.3e-71 274.2 591 41.3
CAN.G742.6 Capsicum annuum HOM05D000108 ORTHO05D001378 3.1e-71 273.9 599 38.7
C03p68770 Brassica napus HOM05D000108 ORTHO05D001378 5.2e-71 273.1 559 36.5
BolC3t19131H Brassica oleracea HOM05D000108 ORTHO05D001378 6.8e-71 272.7 559 36.5
Potri.004G193700 Populus trichocarpa HOM05D000108 ORTHO05D001378 4.4e-70 270.0 587 38.7
AT3G44050 Arabidopsis thaliana HOM05D000108 ORTHO05D001378 4.9e-69 266.5 591 35.4
AL5G22070 Arabidopsis lyrata HOM05D000108 ORTHO05D001378 8.3e-69 265.8 471 39.9
Thhalv10010073m.g Eutrema salsugineum HOM05D000108 ORTHO05D001378 1.1e-68 265.4 561 38.1
Nitab4.5_0007815g0020 Nicotiana tabacum HOM05D000108 ORTHO05D001378 1.1e-68 265.4 566 37.8
Aa31LG4G13630 Aethionema arabicum HOM05D000108 ORTHO05D001378 2.7e-67 260.8 565 37.0
BcaB01g01202 Brassica carinata HOM05D000108 ORTHO05D001378 2.3e-66 257.7 557 36.8
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 4.0e-63 246.9 599 34.2
TPR.G4215 Trifolium pratense HOM05D000108 ORTHO05D001378 4.0e-63 246.9 585 35.4
CDE10G0539 Ceratophyllum demersum HOM05D000108 ORTHO05D001378 5.2e-63 246.5 508 37.8
CARHR152720 Cardamine hirsuta HOM05D000108 ORTHO05D001378 8.9e-63 245.7 567 35.4
Sc21g0006680 Simmondsia chinensis HOM05D000108 ORTHO05D001378 2.0e-62 244.6 719 32.0
Aa31LG2G17170 Aethionema arabicum HOM05D000108 ORTHO05D001378 3.7e-61 240.4 589 35.3
DCAR_001040 Daucus carota HOM05D000108 ORTHO05D001378 2.4e-60 237.7 644 34.8
Psat5g263040 Pisum sativum HOM05D000108 ORTHO05D001378 1.2e-59 235.3 602 36.0
HanXRQChr05g0137031 Helianthus annuus HOM05D000108 ORTHO05D001378 6.6e-58 229.6 644 31.8
Solyc11g071730.3 Solanum lycopersicum HOM05D000108 ORTHO05D001378 3.6e-56 223.8 454 40.1
ATR0697G287 Amborella trichopoda HOM05D000108 ORTHO05D001378 3.5e-51 207.2 597 31.8
Zm00001eb057370 Zea mays HOM05D000108 ORTHO05D001378 6.4e-45 186.4 480 36.7
Hma1.2p1_1811F.1_g303560 Hydrangea macrophylla HOM05D000108 ORTHO05D001378 7.1e-44 183.0 188 58.0
Actinidia06349 Actinidia chinensis HOM05D000108 ORTHO05D001378 9.3e-44 182.6 513 36.1
Os03g0750300 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D001378 3.3e-41 174.1 501 31.9
TAR636G1244 Trochodendron aralioides HOM05D000108 ORTHO05D001378 7.3e-41 172.9 120 80.8
Lj3g0001879 Lotus japonicus HOM05D000108 ORTHO05D001378 2.6e-38 164.5 329 40.4
Zm00001eb210340 Zea mays HOM05D000108 ORTHO05D001378 4.5e-38 163.7 480 34.8
SHI25284 Sapria himalayana HOM05D000108 ORTHO05D001378 1.2e-35 155.6 496 32.1
Sabra04G0131700 Salix brachista HOM05D000108 ORTHO05D001378 5.3e-31 140.2 207 48.8
unitig_22.g6166 Utricularia gibba HOM05D000108 ORTHO05D001378 1.6e-27 128.6 512 26.0
Lalb_Chr14g0375901 Lupinus albus HOM05D000108 ORTHO05D001378 3.4e-14 84.3 97 53.6
HPP92_018836 Vanilla planifolia HOM05D000108 ORTHO05D001378 7.9e-11 73.2 137 43.8
unitig_22.g6167 Utricularia gibba HOM05D000108 ORTHO05D001378 9.7e-09 66.2 46 73.9
AUR62028277 Chenopodium quinoa HOM05D002677 ORTHO05D002906 3.4e-06 57.8 76 53.9


User provided reference genes

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