Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0892 Trochodendron aralioides HOM05D000794 ORTHO05D000616 2.6e-53 211.8 109 100.0
TAR623G0922 Trochodendron aralioides HOM05D000794 ORTHO05D000616 4.4e-37 157.9 103 81.6
TAR369G0781 Trochodendron aralioides HOM05D000794 ORTHO05D000616 1.4e-35 152.9 103 76.7
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 1.6e-26 122.9 101 61.4
Nn7g36098 Nelumbo nucifera HOM05D000794 ORTHO05D000616 2.7e-26 122.1 99 66.7
Haze_19931 Corylus avellana HOM05D000794 ORTHO05D000616 3.8e-25 118.2 103 59.2
Cfa016883 Carpinus fangiana HOM05D000794 ORTHO05D000616 8.6e-25 117.1 103 58.3
GSVIVG01025313001 Vitis vinifera HOM05D000794 ORTHO05D000616 8.6e-25 117.1 104 60.6
Dinv18110 Davidia involucrata HOM05D000794 ORTHO05D000616 1.1e-24 116.7 102 57.8
MBI04_g14261_MAGBIO Magnolia biondii HOM05D000794 ORTHO05D000616 1.1e-24 116.7 99 62.6
MBI01_g36434_MAGBIO Magnolia biondii HOM05D000794 ORTHO05D000616 7.2e-24 114.0 98 64.3
Nn4g22351 Nelumbo nucifera HOM05D000794 ORTHO05D000616 9.5e-24 113.6 99 63.6
Dinv08044 Davidia involucrata HOM05D000794 ORTHO05D000616 3.0e-22 108.6 102 62.7
Thecc.05G166100 Theobroma cacao HOM05D000794 ORTHO05D000616 3.4e-21 105.1 101 55.4
QL07p022469 Quercus lobata HOM05D000794 ORTHO05D000616 2.2e-20 102.4 103 52.4
CSS0039847 Camellia sinensis var. sinensis HOM05D000794 ORTHO05D000616 3.7e-20 101.7 101 54.5
COL.COLO4_28740 Corchorus olitorius HOM05D000794 ORTHO05D000616 4.9e-20 101.3 104 55.8
Duzib093G2022 Durio zibethinus HOM05D000794 ORTHO05D000616 4.9e-20 101.3 100 55.0
Aqoxy1G00271 Aquilegia oxysepala HOM05D000794 ORTHO05D000616 3.1e-19 98.6 103 57.3
CDE07G1178 Ceratophyllum demersum HOM05D000794 ORTHO05D000616 5.4e-19 97.8 99 59.6
CiPaw.09G033500 Carya illinoinensis HOM05D000794 ORTHO05D000616 2.0e-18 95.9 103 48.5
CiPaw.13G164300 Carya illinoinensis HOM05D000794 ORTHO05D000616 2.0e-18 95.9 104 54.8
CDE04G1032 Ceratophyllum demersum HOM05D000794 ORTHO05D000616 2.7e-18 95.5 99 57.6
Cc06_g16390 Coffea canephora HOM05D000794 ORTHO05D000616 2.7e-18 95.5 101 48.5
QL01p005692 Quercus lobata HOM05D000794 ORTHO05D000616 2.7e-18 95.5 103 58.3
arahy.Tifrunner.gnm1.ann1.ITUB3V Arachis hypogaea HOM05D000794 ORTHO05D000616 4.5e-18 94.7 96 55.2
Nn2g15506 Nelumbo nucifera HOM05D000794 ORTHO05D000616 4.5e-18 94.7 101 51.5
arahy.Tifrunner.gnm1.ann1.J0D1JF Arachis hypogaea HOM05D000794 ORTHO05D000616 1.0e-17 93.6 96 55.2
Duzib106G1086 Durio zibethinus HOM05D000794 ORTHO05D000616 1.3e-17 93.2 101 50.5
Atru.chr1.941 Acer truncatum HOM05D000794 ORTHO05D000616 6.6e-17 90.9 93 53.8
Cpa.g.sc85.115 Carica papaya HOM05D000794 ORTHO05D000616 1.5e-16 89.7 103 49.5
Lju124A33T35 Lonicera japonica HOM05D000794 ORTHO05D000616 1.9e-16 89.4 105 48.6
Actinidia16303 Actinidia chinensis HOM05D000794 ORTHO05D000616 4.3e-16 88.2 109 50.5
CiPaw.10G029100 Carya illinoinensis HOM05D000794 ORTHO05D000616 4.3e-16 88.2 104 50.0
Manes.08G047200 Manihot esculenta HOM05D000794 ORTHO05D000616 4.3e-16 88.2 104 51.0
Hma1.2p1_0929F.1_g237920 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 5.6e-16 87.8 103 50.5
Glyma.02G175700 Glycine max HOM05D000794 ORTHO05D000616 1.2e-15 86.7 96 52.1
Actinidia06881 Actinidia chinensis HOM05D000794 ORTHO05D000616 1.6e-15 86.3 109 49.5
VMungo0720G1710 Vigna mungo HOM05D000794 ORTHO05D000616 1.6e-15 86.3 106 50.0
Dinv09379 Davidia involucrata HOM05D000794 ORTHO05D000616 2.1e-15 85.9 103 49.5
Manes.09G031000 Manihot esculenta HOM05D000794 ORTHO05D000616 2.1e-15 85.9 104 50.0
Glyma.10G093100 Glycine max HOM05D000794 ORTHO05D000616 2.8e-15 85.5 96 52.1
Peaxi162Scf00003g04231 Petunia axillaris HOM05D000794 ORTHO05D000616 2.8e-15 85.5 105 43.8
Lj5g0027401 Lotus japonicus HOM05D000794 ORTHO05D000616 4.7e-15 84.7 97 53.6
ATR0605G247 Amborella trichopoda HOM05D000794 ORTHO05D000616 6.1e-15 84.3 103 48.5
Ca_12112_v3 Cicer arietinum L. HOM05D000794 ORTHO05D000616 8.0e-15 84.0 96 49.0
Ca_12113_v3 Cicer arietinum L. HOM05D000794 ORTHO05D000616 8.0e-15 84.0 96 49.0
Hma1.2p1_0845F.1_g227560 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 8.0e-15 84.0 103 50.5
GSVIVG01033356001 Vitis vinifera HOM05D000794 ORTHO05D000616 8.0e-15 84.0 103 50.5
Ciclev10005233m.g Citrus clementina HOM05D000794 ORTHO05D000616 1.0e-14 83.6 97 47.4
PGR004G0217 Punica granatum HOM05D000794 ORTHO05D000616 1.4e-14 83.2 102 49.0
Rhsim07G0054000 Rhododendron simsii HOM05D000794 ORTHO05D000616 3.0e-14 82.0 106 51.9
CSS0030604 Camellia sinensis var. sinensis HOM05D000794 ORTHO05D000616 4.0e-14 81.6 104 51.0
Cfa009722 Carpinus fangiana HOM05D000794 ORTHO05D000616 4.0e-14 81.6 102 48.0
Haze_23074 Corylus avellana HOM05D000794 ORTHO05D000616 5.2e-14 81.3 103 48.5
PSO339G5582 Papaver somniferum HOM05D000794 ORTHO05D000616 5.2e-14 81.3 85 57.6
TPR.G25651 Trifolium pratense HOM05D000794 ORTHO05D000616 5.2e-14 81.3 96 49.0
CSS0038707 Camellia sinensis var. sinensis HOM05D000794 ORTHO05D000616 6.8e-14 80.9 101 52.5
CSS0039844 Camellia sinensis var. sinensis HOM05D000794 ORTHO05D000616 6.8e-14 80.9 101 52.5
Peaxi162Scf00285g00311 Petunia axillaris HOM05D000794 ORTHO05D000616 6.8e-14 80.9 105 46.7
GSVIVG01032055001 Vitis vinifera HOM05D000794 ORTHO05D000616 6.8e-14 80.9 101 50.5
DCAR_013566 Daucus carota HOM05D000794 ORTHO05D000616 8.9e-14 80.5 101 44.6
Cc01_g04410 Coffea canephora HOM05D000794 ORTHO05D000616 1.2e-13 80.1 102 50.0
Sabra06G0040700 Salix brachista HOM05D000794 ORTHO05D000616 1.5e-13 79.7 101 51.5
Actinidia21564 Actinidia chinensis HOM05D000794 ORTHO05D000616 2.0e-13 79.3 101 52.5
Actinidia31050 Actinidia chinensis HOM05D000794 ORTHO05D000616 2.0e-13 79.3 106 51.9
Psat6g101360 Pisum sativum HOM05D000794 ORTHO05D000616 2.0e-13 79.3 96 46.9
Phvul.007G257100 Phaseolus vulgaris HOM05D000794 ORTHO05D000616 3.4e-13 78.6 106 47.2
PGSC0003DMG400008153 Solanum tuberosum HOM05D000794 ORTHO05D000616 3.4e-13 78.6 105 42.9
Hma1.2p1_0856F.1_g229030 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 7.5e-13 77.4 81 51.9
Dinv43464 Davidia involucrata HOM05D000794 ORTHO05D000616 1.3e-12 76.6 95 50.5
Actinidia20683 Actinidia chinensis HOM05D000794 ORTHO05D000616 1.7e-12 76.3 105 49.5
Eucgr.A02417 Eucalyptus grandis HOM05D000794 ORTHO05D000616 6.4e-12 74.3 100 43.0
vmacro08021 Vaccinium macrocarpon HOM05D000794 ORTHO05D000616 6.4e-12 74.3 104 47.1
Sopen10g029690 Solanum pennellii HOM05D000794 ORTHO05D000616 8.3e-12 73.9 105 41.0
Gohir.A01G195200 Gossypium hirsutum HOM05D000794 ORTHO05D000616 1.1e-11 73.6 105 43.8
Medtr1g052470 Medicago truncatula HOM05D000794 ORTHO05D000616 1.1e-11 73.6 96 45.8
Peaxi162Scf01399g00020 Petunia axillaris HOM05D000794 ORTHO05D000616 1.1e-11 73.6 100 42.0
Solyc10g079050.2 Solanum lycopersicum HOM05D000794 ORTHO05D000616 1.1e-11 73.6 105 41.0
Gohir.D01G185500 Gossypium hirsutum HOM05D000794 ORTHO05D000616 1.4e-11 73.2 105 43.8
Gorai.002G228900 Gossypium raimondii HOM05D000794 ORTHO05D000616 1.4e-11 73.2 105 43.8
PSO384G1452 Papaver somniferum HOM05D000794 ORTHO05D000616 1.4e-11 73.2 101 51.5
Peaxi162Scf00243g00085 Petunia axillaris HOM05D000794 ORTHO05D000616 1.4e-11 73.2 105 41.0
Prupe.6G022200 Prunus persica HOM05D000794 ORTHO05D000616 1.9e-11 72.8 102 46.1
Lalb_Chr18g0047571 Lupinus albus HOM05D000794 ORTHO05D000616 2.4e-11 72.4 113 41.6
Rhsim03G0010500 Rhododendron simsii HOM05D000794 ORTHO05D000616 2.4e-11 72.4 104 45.2
Ciclev10031622m.g Citrus clementina HOM05D000794 ORTHO05D000616 7.0e-11 70.9 100 48.0
CAN.G1161.6 Capsicum annuum HOM05D000794 ORTHO05D000616 9.2e-11 70.5 105 40.0
Cc02_g27520 Coffea canephora HOM05D000794 ORTHO05D000616 9.2e-11 70.5 98 44.9
MD03G1023200 Malus domestica HOM05D000794 ORTHO05D000616 9.2e-11 70.5 114 45.6
Oeu033178.1 Olea europaea HOM05D000794 ORTHO05D000616 9.2e-11 70.5 102 41.2
MD02G1315700 Malus domestica HOM05D000794 ORTHO05D000616 1.2e-10 70.1 103 45.6
Hma1.2p1_0640F.1_g194070 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 3.5e-10 68.6 73 52.1
Potri.016G050500 Populus trichocarpa HOM05D000794 ORTHO05D000616 4.6e-10 68.2 94 51.1
FAN25G3836 Fragaria x ananassa HOM05D000794 ORTHO05D000616 6.0e-10 67.8 107 43.0
Glyma.03G141700 Glycine max HOM05D000794 ORTHO05D000616 6.0e-10 67.8 86 45.3
Sabra16G0053900 Salix brachista HOM05D000794 ORTHO05D000616 6.0e-10 67.8 94 52.1
Oeu035711.1 Olea europaea HOM05D000794 ORTHO05D000616 7.8e-10 67.4 104 43.3
Rhsim13G0224500 Rhododendron simsii HOM05D000794 ORTHO05D000616 7.8e-10 67.4 109 45.9
Zm00001eb323880 Zea mays HOM05D000794 ORTHO05D000616 7.8e-10 67.4 95 48.4
Duzib268G1401 Durio zibethinus HOM05D000794 ORTHO05D000616 1.0e-09 67.0 103 39.8
vmacro04179 Vaccinium macrocarpon HOM05D000794 ORTHO05D000616 1.0e-09 67.0 112 46.4
CANSAT80G0476 Cannabis sativa HOM05D000794 ORTHO05D000616 1.7e-09 66.2 118 42.4
CANSAT80G1225 Cannabis sativa HOM05D000794 ORTHO05D000616 1.7e-09 66.2 119 42.0
Dinv36291 Davidia involucrata HOM05D000794 ORTHO05D000616 1.7e-09 66.2 102 48.0
MD02G1315600 Malus domestica HOM05D000794 ORTHO05D000616 1.7e-09 66.2 104 45.2
vmacro13651 Vaccinium macrocarpon HOM05D000794 ORTHO05D000616 1.7e-09 66.2 103 47.6
FAN21G1013 Fragaria x ananassa HOM05D000794 ORTHO05D000616 2.3e-09 65.9 103 44.7
QL04p005185 Quercus lobata HOM05D000794 ORTHO05D000616 2.3e-09 65.9 101 42.6
TWI34G2012 Tripterygium wilfordii HOM05D000794 ORTHO05D000616 2.3e-09 65.9 102 42.2
VMungo1383G2359 Vigna mungo HOM05D000794 ORTHO05D000616 2.3e-09 65.9 85 42.4
Zm00001eb106720 Zea mays HOM05D000794 ORTHO05D000616 2.3e-09 65.9 97 47.4
Glyma.19G144200 Glycine max HOM05D000794 ORTHO05D000616 3.0e-09 65.5 86 45.3
CSS0025682 Camellia sinensis var. sinensis HOM05D000794 ORTHO05D000616 3.9e-09 65.1 92 46.7
Potri.001G270000 Populus trichocarpa HOM05D000794 ORTHO05D000616 3.9e-09 65.1 100 44.0
RcHm_v2.0_Chr5g0077341 Rosa chinensis HOM05D000794 ORTHO05D000616 3.9e-09 65.1 105 46.7
PGSC0003DMG400023852 Solanum tuberosum HOM05D000794 ORTHO05D000616 5.0e-09 64.7 109 40.4
Thecc.01G414200 Theobroma cacao HOM05D000794 ORTHO05D000616 5.0e-09 64.7 99 43.4
vmacro04180 Vaccinium macrocarpon HOM05D000794 ORTHO05D000616 5.0e-09 64.7 112 45.5
FvH4_3g43280 Fragaria vesca HOM05D000794 ORTHO05D000616 6.6e-09 64.3 103 42.7
FAN11G0318 Fragaria x ananassa HOM05D000794 ORTHO05D000616 6.6e-09 64.3 103 42.7
Nitab4.5_0000991g0070 Nicotiana tabacum HOM05D000794 ORTHO05D000616 8.6e-09 63.9 82 45.1
Potri.009G064700 Populus trichocarpa HOM05D000794 ORTHO05D000616 1.1e-08 63.5 101 45.5
FvH4_7g00670 Fragaria vesca HOM05D000794 ORTHO05D000616 1.5e-08 63.2 105 43.8
FAN06G2728 Fragaria x ananassa HOM05D000794 ORTHO05D000616 1.5e-08 63.2 105 43.8
FAN10G3413 Fragaria x ananassa HOM05D000794 ORTHO05D000616 1.5e-08 63.2 105 43.8
Lj2A649T47 Lonicera japonica HOM05D000794 ORTHO05D000616 1.5e-08 63.2 104 45.2
Prupe.2G009100 Prunus persica HOM05D000794 ORTHO05D000616 1.5e-08 63.2 102 46.1
Eucgr.J00796 Eucalyptus grandis HOM05D000794 ORTHO05D000616 2.5e-08 62.4 84 50.0
FAN16G2983 Fragaria x ananassa HOM05D000794 ORTHO05D000616 2.5e-08 62.4 103 42.7
CiPaw.14G122200 Carya illinoinensis HOM05D000794 ORTHO05D000616 4.3e-08 61.6 105 44.8
FAN01G1314 Fragaria x ananassa HOM05D000794 ORTHO05D000616 4.3e-08 61.6 105 42.9
Nitab4.5_0006768g0030 Nicotiana tabacum HOM05D000794 ORTHO05D000616 5.6e-08 61.2 91 42.9
Nitab4.5_0010082g0040 Nicotiana tabacum HOM05D000794 ORTHO05D000616 5.6e-08 61.2 104 39.4
CANSAT54G2065 Cannabis sativa HOM05D000794 ORTHO05D000616 7.3e-08 60.8 103 41.7
Peaxi162Scf00062g01420 Petunia axillaris HOM05D000794 ORTHO05D000616 7.3e-08 60.8 92 40.2
FAN03G1148 Fragaria x ananassa HOM05D000794 ORTHO05D000616 9.5e-08 60.5 105 43.8
Phvul.001G138600 Phaseolus vulgaris HOM05D000794 ORTHO05D000616 9.5e-08 60.5 84 41.7
SEGI_28708 Sequoiadendron giganteum HOM05D000794 ORTHO05D000616 9.5e-08 60.5 110 37.3
FAN01G1851 Fragaria x ananassa HOM05D000794 ORTHO05D000616 1.2e-07 60.1 105 42.9
VMungo1127G2181 Vigna mungo HOM05D000794 ORTHO05D000616 1.6e-07 59.7 105 41.0
CDE06G0859 Ceratophyllum demersum HOM05D000794 ORTHO05D000616 2.1e-07 59.3 96 46.9
Gorai.006G140200 Gossypium raimondii HOM05D000794 ORTHO05D000616 2.8e-07 58.9 93 45.2
MD11G1028100 Malus domestica HOM05D000794 ORTHO05D000616 2.8e-07 58.9 104 41.3
Phvul.011G057400 Phaseolus vulgaris HOM05D000794 ORTHO05D000616 2.8e-07 58.9 104 41.3
Sabra09G0048000 Salix brachista HOM05D000794 ORTHO05D000616 2.8e-07 58.9 101 43.6
ClCG10G017330 Citrullus lanatus HOM05D000794 ORTHO05D000616 3.6e-07 58.5 92 43.5
Glyma.13G341700 Glycine max HOM05D000794 ORTHO05D000616 3.6e-07 58.5 104 40.4
Gohir.D09G122400 Gossypium hirsutum HOM05D000794 ORTHO05D000616 3.6e-07 58.5 91 45.1
TWI53G1516 Tripterygium wilfordii HOM05D000794 ORTHO05D000616 3.6e-07 58.5 100 43.0
MSTRG.19890 Avicennia marina HOM05D000794 ORTHO05D000616 4.7e-07 58.2 112 39.3
CDE07G0431 Ceratophyllum demersum HOM05D000794 ORTHO05D000616 4.7e-07 58.2 99 43.4
Hma1.2p1_0728F.1_g209300 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 4.7e-07 58.2 79 46.8
Actinidia20296 Actinidia chinensis HOM05D000794 ORTHO05D000616 6.2e-07 57.8 102 39.2
MELO3C009651.2 Cucumis melo HOM05D000794 ORTHO05D000616 6.2e-07 57.8 103 43.7
Eucgr.B03669 Eucalyptus grandis HOM05D000794 ORTHO05D000616 6.2e-07 57.8 102 41.2
Oeu010355.1 Olea europaea HOM05D000794 ORTHO05D000616 8.0e-07 57.4 100 41.0
Ca_20578_v3 Cicer arietinum L. HOM05D000794 ORTHO05D000616 1.1e-06 57.0 105 38.1
Gohir.A05G067900 Gossypium hirsutum HOM05D000794 ORTHO05D000616 1.1e-06 57.0 101 36.6
Gohir.D05G070900 Gossypium hirsutum HOM05D000794 ORTHO05D000616 1.1e-06 57.0 101 36.6
Potri.006G057600 Populus trichocarpa HOM05D000794 ORTHO05D000616 1.1e-06 57.0 64 53.1
RcHm_v2.0_Chr1g0314891 Rosa chinensis HOM05D000794 ORTHO05D000616 1.1e-06 57.0 106 42.5
Solyc12g100140.3 Solanum lycopersicum HOM05D000794 ORTHO05D000616 1.1e-06 57.0 94 39.4
Thecc.09G226600 Theobroma cacao HOM05D000794 ORTHO05D000616 1.1e-06 57.0 102 38.2
Os08g0506700 Oryza sativa ssp. japonica HOM05D000794 ORTHO05D000616 1.4e-06 56.6 102 44.1
Manes.14G013300 Manihot esculenta HOM05D000794 ORTHO05D000616 1.8e-06 56.2 101 41.6
CsaV3_3G039080 Cucumis sativus L. HOM05D000794 ORTHO05D000616 2.3e-06 55.8 103 41.7
Medtr2g098310 Medicago truncatula HOM05D000794 ORTHO05D000616 2.3e-06 55.8 107 39.3
Phvul.011G213500 Phaseolus vulgaris HOM05D000794 ORTHO05D000616 2.3e-06 55.8 88 38.6
Gorai.009G071900 Gossypium raimondii HOM05D000794 ORTHO05D000616 3.1e-06 55.5 101 35.6
Cfa010736 Carpinus fangiana HOM05D000794 ORTHO05D000616 4.0e-06 55.1 103 38.8
DCAR_017032 Daucus carota HOM05D000794 ORTHO05D000616 4.0e-06 55.1 104 39.4
Glyma.15G032700 Glycine max HOM05D000794 ORTHO05D000616 4.0e-06 55.1 104 37.5
Lj3g0007038 Lotus japonicus HOM05D000794 ORTHO05D000616 4.0e-06 55.1 102 38.2
Ca_23867_v3 Cicer arietinum L. HOM05D000794 ORTHO05D000616 5.2e-06 54.7 86 38.4
Haze_03238 Corylus avellana HOM05D000794 ORTHO05D000616 5.2e-06 54.7 101 39.6
Nitab4.5_0001925g0040 Nicotiana tabacum HOM05D000794 ORTHO05D000616 5.2e-06 54.7 104 36.5
DCAR_023757 Daucus carota HOM05D000794 ORTHO05D000616 6.8e-06 54.3 105 40.0
Glyma.12G055400 Glycine max HOM05D000794 ORTHO05D000616 6.8e-06 54.3 108 41.7
Gohir.A09G125500 Gossypium hirsutum HOM05D000794 ORTHO05D000616 8.9e-06 53.9 95 41.1
Sed0020680 Sechium edule HOM05D000794 ORTHO05D000616 8.9e-06 53.9 106 39.6


User provided reference genes

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