Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 7.0e-178 627.1 301 100.0
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 1.2e-100 370.5 244 71.3
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 2.7e-97 359.4 218 73.9
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 3.9e-96 355.5 248 69.4
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 8.8e-96 354.4 248 68.5
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 1.5e-95 353.6 248 68.5
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 1.7e-94 350.1 236 69.1
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 6.3e-94 348.2 245 66.9
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 8.2e-94 347.8 213 73.7
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 1.1e-93 347.4 229 71.2
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 1.4e-93 347.1 202 77.7
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 4.1e-93 345.5 214 72.4
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 1.0e-91 340.9 249 64.7
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 1.0e-91 340.9 200 77.5
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 2.9e-91 339.3 249 65.5
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 2.9e-91 339.3 199 76.9
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 6.5e-91 338.2 201 75.6
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 1.5e-90 337.0 233 68.7
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 3.2e-90 335.9 225 69.8
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 1.2e-89 334.0 199 75.4
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 8.0e-89 331.3 185 80.5
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 1.0e-88 330.9 239 65.7
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 2.3e-88 329.7 256 63.7
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 4.0e-88 328.9 221 69.7
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 1.5e-87 327.0 200 73.0
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 2.0e-87 326.6 196 73.0
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 2.6e-87 326.2 201 73.1
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 3.3e-87 325.9 216 68.5
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 3.3e-87 325.9 199 71.9
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 7.5e-87 324.7 231 63.2
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 1.3e-86 323.9 181 80.1
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.7e-86 323.6 197 74.1
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 1.7e-86 323.6 190 76.8
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 8.2e-86 321.2 232 61.6
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 9.1e-85 317.8 194 73.7
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 9.1e-85 317.8 197 72.1
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 2.0e-84 316.6 216 64.4
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 2.7e-84 316.2 201 71.1
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 7.7e-84 314.7 223 66.4
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 7.7e-84 314.7 231 63.2
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 1.3e-83 313.9 188 74.5
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 6.5e-83 311.6 181 79.0
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 5.5e-82 308.5 214 65.0
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 5.5e-82 308.5 201 68.7
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 7.2e-82 308.1 204 68.6
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 2.1e-81 306.6 228 62.7
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.0e-80 304.3 217 65.4
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.8e-80 303.5 225 65.3
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 3.0e-80 302.8 201 68.2
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 4.0e-80 302.4 186 74.2
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 8.8e-80 301.2 241 59.3
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 1.5e-79 300.4 200 67.5
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 2.0e-79 300.1 182 74.7
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 3.4e-79 299.3 215 65.1
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 4.4e-79 298.9 223 63.7
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 1.7e-78 297.0 223 61.0
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 3.7e-78 295.8 214 63.6
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 6.3e-78 295.0 160 85.6
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 8.3e-78 294.7 224 61.6
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 3.1e-77 292.7 172 76.2
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 1.6e-76 290.4 219 63.0
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 5.9e-76 288.5 194 65.5
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 1.7e-75 287.0 197 67.5
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 8.6e-75 284.6 194 64.9
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 5.5e-74 282.0 194 64.4
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 7.2e-74 281.6 182 70.9
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 7.2e-74 281.6 182 70.9
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 1.2e-73 280.8 194 64.4
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 1.2e-73 280.8 194 64.9
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 2.1e-73 280.0 217 60.8
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 3.6e-73 279.3 184 68.5
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 3.6e-73 279.3 193 66.8
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 6.1e-73 278.5 194 64.4
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 6.1e-73 278.5 188 64.9
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 1.0e-72 277.7 196 64.8
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 1.4e-72 277.3 197 65.0
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 1.8e-72 276.9 210 59.0
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 4.0e-72 275.8 194 63.4
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 4.0e-72 275.8 194 63.4
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 6.8e-72 275.0 182 67.6
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 2.6e-71 273.1 195 63.6
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 3.4e-71 272.7 200 62.0
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 7.5e-71 271.6 194 62.4
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 7.5e-71 271.6 201 62.7
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 7.5e-71 271.6 182 67.6
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 9.8e-71 271.2 249 58.2
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-70 270.8 188 63.3
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 3.7e-70 269.2 201 61.2
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 4.9e-70 268.9 196 58.7
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 6.3e-70 268.5 201 62.2
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 6.3e-70 268.5 193 61.7
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 8.3e-70 268.1 182 65.4
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 8.3e-70 268.1 182 65.4
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 8.3e-70 268.1 201 61.7
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 8.3e-70 268.1 182 65.4
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 1.4e-69 267.3 213 57.7
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.4e-69 267.3 191 60.2
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.8e-69 266.9 182 66.5
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 2.4e-69 266.5 201 60.7
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 2.4e-69 266.5 200 60.5
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 2.4e-69 266.5 225 55.6
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 2.4e-69 266.5 200 60.5
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 3.1e-69 266.2 214 57.5
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 3.1e-69 266.2 200 60.5
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 3.1e-69 266.2 182 65.9
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 4.1e-69 265.8 213 57.3
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.3e-67 260.8 213 57.3
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 3.8e-67 259.2 182 62.6
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 2.5e-66 256.5 178 64.6
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 2.5e-66 256.5 221 57.9
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.5e-66 256.5 186 60.2
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 9.5e-66 254.6 191 61.8
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 1.0e-64 251.1 182 60.4
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 4.0e-64 249.2 183 62.3
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 2.6e-63 246.5 175 60.6
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 5.8e-63 245.4 138 84.8
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 4.9e-62 242.3 158 67.7
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.9e-61 240.4 152 77.0
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 2.4e-61 240.0 191 60.2
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 1.6e-60 237.3 187 56.1
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 1.6e-60 237.3 187 56.1
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 2.7e-60 236.5 183 57.4
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 5.6e-58 228.8 187 54.5
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 5.6e-58 228.8 187 54.5
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 5.6e-58 228.8 190 56.8
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 1.6e-57 227.3 196 55.1
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 1.6e-57 227.3 263 41.8
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 6.2e-57 225.3 196 54.1
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 8.0e-57 224.9 205 54.6
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 2.3e-56 223.4 181 55.8
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 4.0e-56 222.6 212 49.5
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-54 217.6 167 62.3
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 6.4e-54 215.3 187 53.5
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 1.1e-53 214.5 168 58.3
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 4.1e-53 212.6 216 48.6
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 6.6e-51 205.3 141 69.5
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 2.4e-45 186.8 184 46.2
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 6.0e-44 182.2 112 71.4
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-43 181.0 123 65.0
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 3.3e-42 176.4 221 42.5
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 1.3e-38 164.5 263 38.4
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 4.6e-36 156.0 180 45.6
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 3.0e-35 153.3 180 45.0
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 3.0e-35 153.3 180 45.0
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 8.7e-35 151.8 107 64.5
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 3.3e-34 149.8 188 44.1
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 6.2e-33 145.6 121 56.2
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 1.1e-32 144.8 178 42.7
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 6.4e-30 135.6 116 60.3
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 4.2e-29 132.9 85 71.8
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.6e-28 131.0 129 51.9
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.0e-27 128.3 135 50.4
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 6.6e-27 125.6 175 38.9
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.5e-26 123.6 86 58.1
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 3.1e-24 116.7 96 58.3
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 2.6e-23 113.6 195 37.9
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 1.9e-21 107.5 75 62.7
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 1.0e-19 101.7 74 60.8
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 1.1e-16 91.7 151 39.1
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.4e-16 91.3 67 61.2
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 2.0e-15 87.4 59 61.0
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 7.6e-15 85.5 59 62.7
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 1.2e-12 78.2 138 34.8
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 1.2e-12 78.2 138 34.8
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 6.0e-12 75.9 139 33.8
BraA03t09486Z Brassica rapa HOM05D004249 ORTHO05D005015 4.5e-07 59.7 45 51.1
Cfa025661 Carpinus fangiana HOM05D004249 ORTHO05D005015 3.8e-06 56.6 147 31.3


User provided reference genes

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