Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0863 Trochodendron aralioides HOM05D003887 ORTHO05D004523 4.3e-77 291.2 143 100.0
GSVIVG01028462001 Vitis vinifera HOM05D003887 ORTHO05D004523 1.1e-61 240.0 141 80.9
TAR265G0002 Trochodendron aralioides HOM05D003887 ORTHO05D004523 7.4e-61 237.3 134 84.3
Nn1g06263 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.7e-60 236.1 132 84.1
Potri.016G067200 Populus trichocarpa HOM05D003887 ORTHO05D004523 3.5e-58 228.4 132 81.8
RcHm_v2.0_Chr3g0476591 Rosa chinensis HOM05D003887 ORTHO05D004523 5.9e-58 227.6 143 79.0
Haze_20135 Corylus avellana HOM05D003887 ORTHO05D004523 3.8e-57 224.9 136 77.2
Nn5g28552 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.5e-56 223.0 134 80.6
Solyc10g079830.3 Solanum lycopersicum HOM05D003887 ORTHO05D004523 1.9e-56 222.6 127 80.3
Sopen10g030440 Solanum pennellii HOM05D003887 ORTHO05D004523 1.9e-56 222.6 127 80.3
Thecc.05G108100 Theobroma cacao HOM05D003887 ORTHO05D004523 3.2e-56 221.9 143 75.5
MBI07_g23221_MAGBIO Magnolia biondii HOM05D003887 ORTHO05D004523 4.2e-56 221.5 127 80.3
Duzib128G1521 Durio zibethinus HOM05D003887 ORTHO05D004523 5.5e-56 221.1 134 77.6
CSS0042801 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 9.4e-56 220.3 137 78.1
Duzib106G1345 Durio zibethinus HOM05D003887 ORTHO05D004523 9.4e-56 220.3 143 74.8
COL.COLO4_29521 Corchorus olitorius HOM05D003887 ORTHO05D004523 1.6e-55 219.5 132 79.5
Lj3C240T1 Lonicera japonica HOM05D003887 ORTHO05D004523 2.7e-55 218.8 126 84.1
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 2.7e-55 218.8 127 84.3
Atru.chr8.1305 Acer truncatum HOM05D003887 ORTHO05D004523 3.6e-55 218.4 134 76.1
Hma1.2p1_0969F.1_g242620 Hydrangea macrophylla HOM05D003887 ORTHO05D004523 3.6e-55 218.4 134 77.6
QL10p000363 Quercus lobata HOM05D003887 ORTHO05D004523 3.6e-55 218.4 133 78.2
TWI18G1123 Tripterygium wilfordii HOM05D003887 ORTHO05D004523 3.6e-55 218.4 134 78.4
CiPaw.09G022700 Carya illinoinensis HOM05D003887 ORTHO05D004523 6.1e-55 217.6 133 78.9
CAN.G1656.10 Capsicum annuum HOM05D003887 ORTHO05D004523 8.0e-55 217.2 129 77.5
Prupe.7G091600 Prunus persica HOM05D003887 ORTHO05D004523 8.0e-55 217.2 137 77.4
QL07p027116 Quercus lobata HOM05D003887 ORTHO05D004523 8.0e-55 217.2 142 74.6
PGSC0003DMG400029847 Solanum tuberosum HOM05D003887 ORTHO05D004523 8.0e-55 217.2 127 79.5
MD12G1043200 Malus domestica HOM05D003887 ORTHO05D004523 1.0e-54 216.9 140 74.3
QL02p078458 Quercus lobata HOM05D003887 ORTHO05D004523 1.4e-54 216.5 133 77.4
Sabra16G0068500 Salix brachista HOM05D003887 ORTHO05D004523 1.4e-54 216.5 130 79.2
vmacro07505 Vaccinium macrocarpon HOM05D003887 ORTHO05D004523 1.4e-54 216.5 131 77.9
Cc06_g20890 Coffea canephora HOM05D003887 ORTHO05D004523 1.8e-54 216.1 126 80.2
Hund18807 Selenicereus undatus HOM05D003887 ORTHO05D004523 1.8e-54 216.1 132 78.8
Cc06_g06820 Coffea canephora HOM05D003887 ORTHO05D004523 3.0e-54 215.3 133 78.2
MD14G1042300 Malus domestica HOM05D003887 ORTHO05D004523 4.0e-54 214.9 139 75.5
Aqoxy1G00605 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 5.2e-54 214.5 130 79.2
Aqoxy2G02430 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 5.2e-54 214.5 130 79.2
FAN05G1982 Fragaria x ananassa HOM05D003887 ORTHO05D004523 6.7e-54 214.2 137 76.6
FvH4_6g20690 Fragaria vesca HOM05D003887 ORTHO05D004523 1.2e-53 213.4 137 76.6
FAN14G0913 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.2e-53 213.4 137 76.6
CANSAT64G2672 Cannabis sativa HOM05D003887 ORTHO05D004523 3.3e-53 211.8 140 72.9
CAN.G1237.27 Capsicum annuum HOM05D003887 ORTHO05D004523 3.3e-53 211.8 122 80.3
Manes.08G035800 Manihot esculenta HOM05D003887 ORTHO05D004523 3.3e-53 211.8 134 75.4
Sc06g0010620 Simmondsia chinensis HOM05D003887 ORTHO05D004523 3.3e-53 211.8 134 76.9
Ciclev10013089m.g Citrus clementina HOM05D003887 ORTHO05D004523 4.4e-53 211.5 133 74.4
Sc06g0008630 Simmondsia chinensis HOM05D003887 ORTHO05D004523 5.7e-53 211.1 127 80.3
Ah.08g222240 Amaranthus hybridus HOM05D003887 ORTHO05D004523 1.3e-52 209.9 132 74.2
Gorai.002G153400 Gossypium raimondii HOM05D003887 ORTHO05D004523 2.2e-52 209.1 131 76.3
FAN09G3131 Fragaria x ananassa HOM05D003887 ORTHO05D004523 2.8e-52 208.8 137 73.7
FAN05G1871 Fragaria x ananassa HOM05D003887 ORTHO05D004523 4.8e-52 208.0 130 77.7
Gohir.A01G135300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 6.3e-52 207.6 131 74.8
Nitab4.5_0008674g0010 Nicotiana tabacum HOM05D003887 ORTHO05D004523 8.2e-52 207.2 125 76.8
Eucgr.G00614 Eucalyptus grandis HOM05D003887 ORTHO05D004523 1.4e-51 206.5 126 76.2
Gohir.D04G154300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.4e-51 206.5 131 74.8
Gohir.D01G122500 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.8e-51 206.1 131 75.6
FAN02G3629 Fragaria x ananassa HOM05D003887 ORTHO05D004523 3.1e-51 205.3 133 75.2
Gorai.012G141600 Gossypium raimondii HOM05D003887 ORTHO05D004523 4.1e-51 204.9 131 74.8
Peaxi162Scf00130g01133 Petunia axillaris HOM05D003887 ORTHO05D004523 5.3e-51 204.5 122 77.9
MSTRG.26582 Avicennia marina HOM05D003887 ORTHO05D004523 2.7e-50 202.2 130 76.2
ECA233G2913 Erigeron canadensis HOM05D003887 ORTHO05D004523 3.5e-50 201.8 128 75.0
PGR142G0321 Punica granatum HOM05D003887 ORTHO05D004523 3.5e-50 201.8 131 73.3
Rhsim03G0059700 Rhododendron simsii HOM05D003887 ORTHO05D004523 4.5e-50 201.4 141 68.8
EL10Ac7g16270 Beta vulgaris HOM05D003887 ORTHO05D004523 1.0e-49 200.3 128 77.3
AUR62020206 Chenopodium quinoa HOM05D003887 ORTHO05D004523 1.0e-49 200.3 130 74.6
Gohir.A04G113000 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.0e-49 200.3 131 73.3
Cpa.g.sc104.4 Carica papaya HOM05D003887 ORTHO05D004523 1.3e-49 199.9 130 73.1
CDE02G3355 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 1.7e-49 199.5 128 71.9
SGA_v2.0_scaffold392G50674 Striga asiatica HOM05D003887 ORTHO05D004523 6.5e-49 197.6 131 74.0
DCAR_020685 Daucus carota HOM05D003887 ORTHO05D004523 1.1e-48 196.8 126 74.6
Migut.L01853 Erythranthe guttata HOM05D003887 ORTHO05D004523 4.2e-48 194.9 127 73.2
MSTRG.10420 Avicennia marina HOM05D003887 ORTHO05D004523 7.2e-48 194.1 129 72.9
Os09g0560500 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 1.2e-47 193.4 136 66.2
Lj1g0007196 Lotus japonicus HOM05D003887 ORTHO05D004523 3.6e-47 191.8 126 70.6
Glyma.03G203800 Glycine max HOM05D003887 ORTHO05D004523 4.7e-47 191.4 128 71.9
Glyma.07G068300 Glycine max HOM05D003887 ORTHO05D004523 6.1e-47 191.0 128 70.3
PSO513G0097 Papaver somniferum HOM05D003887 ORTHO05D004523 6.1e-47 191.0 129 67.4
PSO339G2059 Papaver somniferum HOM05D003887 ORTHO05D004523 2.3e-46 189.1 129 65.9
Lsat_1_v5_gn_6_34741 Lactuca sativa HOM05D003887 ORTHO05D004523 3.0e-46 188.7 124 71.0
SHI28303 Sapria himalayana HOM05D003887 ORTHO05D004523 3.0e-46 188.7 119 72.3
VMungo1383G2471 Vigna mungo HOM05D003887 ORTHO05D004523 5.2e-46 188.0 128 69.5
Zm00001eb039830 Zea mays HOM05D003887 ORTHO05D004523 5.2e-46 188.0 139 64.7
PSO210G2693 Papaver somniferum HOM05D003887 ORTHO05D004523 6.8e-46 187.6 129 67.4
VMungo1215G2564 Vigna mungo HOM05D003887 ORTHO05D004523 6.8e-46 187.6 128 70.3
HanXRQChr13g0398651 Helianthus annuus HOM05D003887 ORTHO05D004523 8.8e-46 187.2 113 78.8
Lalb_Chr20g0111271 Lupinus albus HOM05D003887 ORTHO05D004523 8.8e-46 187.2 122 73.8
Zm00001eb039720 Zea mays HOM05D003887 ORTHO05D004523 1.2e-45 186.8 122 69.7
PSO782G0206 Papaver somniferum HOM05D003887 ORTHO05D004523 2.0e-45 186.0 129 65.1
Os08g0556200 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 2.6e-45 185.7 122 73.0
PSO513G0196 Papaver somniferum HOM05D003887 ORTHO05D004523 2.6e-45 185.7 128 65.6
Phvul.001G197300 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 3.4e-45 185.3 128 69.5
Oeu020172.1 Olea europaea HOM05D003887 ORTHO05D004523 4.4e-45 184.9 129 70.5
PSO339G1162 Papaver somniferum HOM05D003887 ORTHO05D004523 1.3e-44 183.3 122 69.7
Actinidia03866 Actinidia chinensis HOM05D003887 ORTHO05D004523 1.7e-44 183.0 100 86.0
Actinidia03974 Actinidia chinensis HOM05D003887 ORTHO05D004523 1.7e-44 183.0 100 86.0
Phvul.001G204200 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 2.2e-44 182.6 128 68.8
Medtr7g106580 Medicago truncatula HOM05D003887 ORTHO05D004523 1.4e-43 179.9 125 68.0
ATR0730G208 Amborella trichopoda HOM05D003887 ORTHO05D004523 2.4e-43 179.1 127 64.6
AUR62042906 Chenopodium quinoa HOM05D003887 ORTHO05D004523 2.4e-43 179.1 119 74.8
SEGI_09372 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 3.1e-43 178.7 130 66.2
Os06g0154600 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 7.0e-43 177.6 118 70.3
arahy.Tifrunner.gnm1.ann1.Z0QHZD Arachis hypogaea HOM05D003887 ORTHO05D004523 1.2e-42 176.8 134 64.9
Medtr2g088720 Medicago truncatula HOM05D003887 ORTHO05D004523 1.2e-42 176.8 125 68.0
CDE09G0948 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 2.7e-42 175.6 110 71.8
Glyma.16G034300 Glycine max HOM05D003887 ORTHO05D004523 3.5e-42 175.3 128 66.4
HanXRQChr01g0028311 Helianthus annuus HOM05D003887 ORTHO05D004523 3.5e-42 175.3 113 75.2
Ca_09068_v3 Cicer arietinum L. HOM05D003887 ORTHO05D004523 4.5e-42 174.9 125 67.2
ATR0730G166 Amborella trichopoda HOM05D003887 ORTHO05D004523 5.9e-42 174.5 127 64.6
unitig_899.g14853 Utricularia gibba HOM05D003887 ORTHO05D004523 7.7e-42 174.1 121 66.9
SEGI_12007 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 1.0e-41 173.7 125 65.6
Psat5g004600 Pisum sativum HOM05D003887 ORTHO05D004523 1.7e-41 172.9 125 65.6
Psat3g027720 Pisum sativum HOM05D001091 ORTHO05D004523 2.9e-41 172.2 120 67.5
TPR.G25788 Trifolium pratense HOM05D003887 ORTHO05D004523 3.8e-41 171.8 119 68.1
Nitab4.5_0000677g0080 Nicotiana tabacum HOM05D003887 ORTHO05D004523 1.1e-40 170.2 109 72.5
Gohir.A04G112940 Gossypium hirsutum HOM05D003887 ORTHO05D004523 3.3e-40 168.7 110 73.6
Medtr7g106600 Medicago truncatula HOM05D003887 ORTHO05D004523 5.5e-40 167.9 125 64.0
AL3G23320 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 9.5e-40 167.2 129 62.8
Sed0005545 Sechium edule HOM05D003887 ORTHO05D004523 9.5e-40 167.2 130 59.2
AagrBONN_evm.TU.Sc2ySwM_117.2540 Anthoceros agrestis HOM05D003887 ORTHO05D004523 1.2e-39 166.8 119 65.5
ClCG04G001280 Citrullus lanatus HOM05D003887 ORTHO05D004523 4.7e-39 164.9 126 60.3
CsaV3_4G004540 Cucumis sativus L. HOM05D003887 ORTHO05D004523 6.1e-39 164.5 126 60.3
THA.LOC104826798 Tarenaya hassleriana HOM05D003887 ORTHO05D004523 1.8e-38 162.9 128 62.5
Lj6g0023596 Lotus japonicus HOM05D003887 ORTHO05D004523 2.3e-38 162.5 122 62.3
MELO3C019050.2 Cucumis melo HOM05D003887 ORTHO05D004523 3.0e-38 162.2 126 59.5
SalBow7G3037 Salvia bowleyana HOM05D003887 ORTHO05D004523 5.2e-38 161.4 136 61.0
AT3G11750 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 1.2e-37 160.2 137 56.9
Aa31LG3G5210 Aethionema arabicum HOM05D003887 ORTHO05D004523 7.5e-37 157.5 138 58.0
Carub.0003s1109 Capsella rubella HOM05D003887 ORTHO05D004523 6.3e-36 154.5 130 59.2
DCAR_009071 Daucus carota HOM05D003887 ORTHO05D004523 6.3e-36 154.5 133 58.6
Thhalv10021697m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 2.4e-35 152.5 133 56.4
Glyma.19G201200 Glycine max HOM05D003887 ORTHO05D004523 2.4e-35 152.5 129 62.0
BcaC09g48199 Brassica carinata HOM05D003887 ORTHO05D004523 3.1e-35 152.1 124 58.9
BolC1t05293H Brassica oleracea HOM05D003887 ORTHO05D004523 3.1e-35 152.1 124 58.9
BraA01t04162Z Brassica rapa HOM05D003887 ORTHO05D004523 3.1e-35 152.1 124 58.9
BcaB04g21119 Brassica carinata HOM05D003887 ORTHO05D004523 5.4e-35 151.4 126 57.9
Lj6g0002536 Lotus japonicus HOM05D003887 ORTHO05D004523 7.0e-35 151.0 119 58.0
BcaB06g25586 Brassica carinata HOM05D003887 ORTHO05D004523 9.2e-35 150.6 124 58.9
Lj6g0002343 Lotus japonicus HOM05D003887 ORTHO05D004523 9.2e-35 150.6 122 57.4
Sp3g09980 Schrenkiella parvula HOM05D003887 ORTHO05D004523 9.2e-35 150.6 119 59.7
AL8G40010 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 1.6e-34 149.8 131 55.0
BcaC05g29334 Brassica carinata HOM05D003887 ORTHO05D004523 2.0e-34 149.4 118 60.2
A05p37580 Brassica napus HOM05D003887 ORTHO05D004523 2.0e-34 149.4 135 56.3
C05p56150 Brassica napus HOM05D003887 ORTHO05D004523 2.0e-34 149.4 118 60.2
BraA05t22556Z Brassica rapa HOM05D003887 ORTHO05D004523 2.0e-34 149.4 118 61.0
SMO351G0485 Selaginella moellendorffii HOM05D003887 ORTHO05D004523 2.0e-34 149.4 117 61.5
AT5G62980 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 2.7e-34 149.1 131 55.0
BcaB02g09713 Brassica carinata HOM05D003887 ORTHO05D004523 2.7e-34 149.1 123 57.7
ECA232G3477 Erigeron canadensis HOM05D003887 ORTHO05D004523 4.5e-34 148.3 104 69.2
Thhalv10005125m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 5.9e-34 147.9 124 55.6
Carub.0008s2369 Capsella rubella HOM05D003887 ORTHO05D004523 1.0e-33 147.1 131 53.4
Pp3c1_42850 Physcomitrium patens HOM05D003887 ORTHO05D004523 2.3e-33 146.0 116 58.6
Aa31LG3G5230 Aethionema arabicum HOM05D003887 ORTHO05D004523 3.8e-33 145.2 124 56.5
A05p37590 Brassica napus HOM05D003887 ORTHO05D004523 5.0e-33 144.8 135 56.3
BraA05t22557Z Brassica rapa HOM05D003887 ORTHO05D004523 5.0e-33 144.8 135 56.3
CARHR276790 Cardamine hirsuta HOM05D003887 ORTHO05D004523 1.1e-32 143.7 124 56.5
arahy.Tifrunner.gnm1.ann1.K0K91E Arachis hypogaea HOM05D003887 ORTHO05D004523 1.2e-31 140.2 134 54.5
AL3G35860 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 1.5e-29 133.3 119 52.9
Mapoly0109s0052 Marchantia polymorpha HOM05D003887 ORTHO05D004523 4.1e-27 125.2 119 52.9
HPP92_016697 Vanilla planifolia HOM05D003887 ORTHO05D004523 9.2e-27 124.0 79 72.2
Actinidia06188 Actinidia chinensis HOM05D003887 ORTHO05D004523 3.0e-25 119.0 66 81.8
PGSC0003DMG400007623 Solanum tuberosum HOM05D003887 ORTHO05D004523 1.6e-23 113.2 75 70.7
CSS0033244 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 3.4e-21 105.5 65 76.9
Nitab4.5_0000936g0150 Nicotiana tabacum HOM05D003887 ORTHO05D004523 1.9e-19 99.8 82 62.2
Rhsim03G0060000 Rhododendron simsii HOM05D003887 ORTHO05D004523 2.4e-19 99.4 64 73.4
Rhsim03G0060200 Rhododendron simsii HOM05D003887 ORTHO05D004523 2.4e-19 99.4 64 73.4
arahy.Tifrunner.gnm1.ann1.97GEQU Arachis hypogaea HOM05D003887 ORTHO05D004523 3.5e-18 95.5 65 72.3
arahy.Tifrunner.gnm1.ann1.3PGZ0K Arachis hypogaea HOM05D003887 ORTHO05D004523 1.0e-17 94.0 62 75.8
arahy.Tifrunner.gnm1.ann1.T8NVRB Arachis hypogaea HOM05D003887 ORTHO05D004523 1.0e-17 94.0 69 69.6
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 1.3e-17 93.6 53 69.8
Cre02.g097450 Chlamydomonas reinhardtii HOM05D003887 ORTHO05D004523 6.6e-17 91.3 112 39.3
Gohir.D09G062150 Gossypium hirsutum HOM05D003887 ORTHO05D004523 2.5e-16 89.4 76 57.9
Gorai.006G076900 Gossypium raimondii HOM05D003887 ORTHO05D004523 5.6e-16 88.2 83 51.8
Lj3A241T19 Lonicera japonica HOM05D003887 ORTHO05D004523 1.6e-15 86.7 59 74.6
Actinidia37764 Actinidia chinensis HOM05D001091 ORTHO05D001020 2.8e-15 85.9 51 84.3
Mapoly0121s0041 Marchantia polymorpha HOM05D003887 ORTHO05D004523 6.8e-14 81.3 57 56.1
Mapoly0003s0213 Marchantia polymorpha HOM05D003887 ORTHO05D004523 5.8e-13 78.2 121 38.0
Aa31LG3G5240 Aethionema arabicum HOM05D003887 ORTHO05D004523 3.2e-11 72.4 69 55.1
AT3G21730 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 7.3e-08 61.2 64 48.4
Nitab4.5_0006280g0090 Nicotiana tabacum HOM05D003887 ORTHO05D048295 1.2e-07 60.5 38 68.4
HanXRQChr02g0053341 Helianthus annuus HOM05D003887 ORTHO05D048295 1.1e-06 57.4 34 70.6


User provided reference genes

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