Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 5.1e-60 234.6 150 100.0
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 2.5e-59 232.3 150 99.3
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 7.1e-54 214.2 150 91.3
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 6.6e-44 181.0 164 64.6
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 6.6e-44 181.0 152 82.9
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 9.6e-43 177.2 154 68.2
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 1.4e-41 173.3 152 77.0
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 1.8e-41 172.9 149 73.8
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 6.9e-41 171.0 151 80.1
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 1.2e-40 170.2 183 67.8
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 2.0e-40 169.5 168 56.0
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 2.0e-40 169.5 169 58.0
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 2.6e-40 169.1 164 58.5
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 4.5e-40 168.3 183 59.6
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 1.7e-39 166.4 182 62.1
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 2.2e-39 166.0 159 56.6
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 2.9e-39 165.6 170 53.5
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 4.9e-39 164.9 160 59.4
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 1.9e-38 162.9 172 52.9
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 3.2e-38 162.2 148 62.2
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 3.2e-38 162.2 168 53.6
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 5.4e-38 161.4 173 70.5
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 1.2e-37 160.2 160 62.5
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 4.6e-37 158.3 172 52.3
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 6.0e-37 157.9 148 56.8
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 1.0e-36 157.1 159 59.7
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 1.3e-36 156.8 170 51.8
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 1.3e-36 156.8 155 58.1
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 2.3e-36 156.0 146 59.6
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 3.9e-36 155.2 155 60.6
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 5.1e-36 154.8 172 52.3
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 8.7e-36 154.1 187 49.7
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 1.9e-35 152.9 187 49.7
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 2.5e-35 152.5 159 58.5
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 5.6e-35 151.4 157 57.3
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 7.4e-35 151.0 166 56.0
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 1.3e-34 150.2 152 75.0
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 1.3e-34 150.2 157 72.6
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 1.3e-34 150.2 160 57.5
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 1.6e-34 149.8 168 51.2
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 6.2e-34 147.9 182 63.7
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 1.4e-33 146.7 171 50.9
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 2.4e-33 146.0 172 51.2
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 2.4e-33 146.0 149 71.1
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 4.0e-33 145.2 152 62.5
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 5.3e-33 144.8 159 52.2
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 9.0e-33 144.1 127 68.5
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 9.0e-33 144.1 149 54.4
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 9.0e-33 144.1 149 54.4
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 1.2e-32 143.7 155 61.3
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 7.6e-32 141.0 173 48.6
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 9.9e-32 140.6 140 58.6
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 1.7e-31 139.8 176 49.4
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 2.2e-31 139.4 143 56.6
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 2.9e-31 139.0 152 53.3
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 3.8e-31 138.7 135 77.0
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 3.8e-31 138.7 154 68.8
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 4.9e-31 138.3 163 65.0
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 4.9e-31 138.3 155 68.4
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 6.4e-31 137.9 174 66.1
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 6.4e-31 137.9 153 67.3
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 8.4e-31 137.5 161 55.3
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 2.4e-30 136.0 179 46.4
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 3.2e-30 135.6 138 58.0
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 2.1e-29 132.9 178 48.9
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 2.7e-29 132.5 151 66.9
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 6.0e-29 131.3 171 46.2
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 7.9e-29 131.0 139 56.8
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 1.3e-28 130.2 171 62.6
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 1.8e-28 129.8 129 55.8
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 2.3e-28 129.4 163 64.4
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 2.3e-28 129.4 159 64.8
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 6.7e-28 127.9 119 56.3
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 8.7e-28 127.5 174 47.1
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 1.1e-27 127.1 134 55.2
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 1.1e-27 127.1 151 70.2
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 1.9e-27 126.3 150 49.3
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 2.8e-26 122.5 148 50.0
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 6.2e-26 121.3 160 49.4
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 1.1e-25 120.6 189 46.6
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 1.1e-25 120.6 110 60.0
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 2.4e-25 119.4 158 64.6
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 6.9e-25 117.9 149 47.0
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 2.0e-24 116.3 156 46.8
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 8.4e-23 110.9 191 58.1
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 1.1e-22 110.5 138 50.0
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 1.1e-22 110.5 165 57.6
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 7.1e-22 107.8 139 48.9
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 7.1e-22 107.8 164 46.3
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 7.1e-22 107.8 139 48.9
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 7.1e-22 107.8 139 48.9
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 1.6e-21 106.7 162 51.2
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 1.6e-21 106.7 156 48.1
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 2.7e-21 105.9 168 45.2
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 3.5e-21 105.5 161 62.7
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 3.0e-20 102.4 171 42.7
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 3.9e-20 102.1 169 45.6
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 1.1e-19 100.5 178 56.2
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 1.9e-19 99.8 157 60.5
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 9.7e-19 97.4 162 42.0
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 1.6e-18 96.7 167 42.5
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 8.2e-18 94.4 145 62.8
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 2.2e-15 86.3 153 39.2
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 2.1e-13 79.7 194 36.6
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 5.1e-12 75.1 108 42.6
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 6.7e-12 74.7 149 44.3
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 2.8e-10 69.3 149 55.7
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 3.7e-10 68.9 95 44.2
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 3.1e-09 65.9 149 55.0
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 8.5e-07 57.8 111 41.4


User provided reference genes

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