Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0732 Trochodendron aralioides HOM05D004404 ORTHO05D005070 3.7e-68 261.5 142 100.0
TAR362G1272 Trochodendron aralioides HOM05D004404 ORTHO05D005070 2.0e-50 202.6 144 80.6
TAR365G1136 Trochodendron aralioides HOM05D004404 ORTHO05D005070 6.7e-46 187.6 134 77.6
Nn1g02537 Nelumbo nucifera HOM05D004404 ORTHO05D005070 5.9e-42 174.5 147 69.4
Dinv10012 Davidia involucrata HOM05D004404 ORTHO05D005070 1.6e-34 149.8 132 68.2
MBI04_g08412_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 1.6e-34 149.8 149 64.4
Atru.chr2.818 Acer truncatum HOM05D004404 ORTHO05D005070 2.5e-32 142.5 153 56.9
Hma1.2p1_0817F.1_g223110 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 3.2e-32 142.1 148 64.2
CiPaw.08G123500 Carya illinoinensis HOM05D004404 ORTHO05D005070 7.2e-32 141.0 136 62.5
GSVIVG01021788001 Vitis vinifera HOM05D004404 ORTHO05D005070 3.6e-31 138.7 144 58.3
MBI11_g15915_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 6.1e-31 137.9 151 57.6
PSO210G4542 Papaver somniferum HOM05D004404 ORTHO05D005070 6.1e-31 137.9 139 59.0
Potri.005G053400 Populus trichocarpa HOM05D004404 ORTHO05D005070 1.8e-30 136.3 142 61.3
Aqoxy5G00363 Aquilegia oxysepala HOM05D004404 ORTHO05D005070 2.3e-30 136.0 146 61.6
FvH4_6g02920 Fragaria vesca HOM05D004404 ORTHO05D005070 1.5e-29 133.3 135 59.3
FAN05G1086 Fragaria x ananassa HOM05D004404 ORTHO05D005070 1.5e-29 133.3 135 59.3
FAN09G2523 Fragaria x ananassa HOM05D004404 ORTHO05D005070 1.5e-29 133.3 135 59.3
FAN14G0219 Fragaria x ananassa HOM05D004404 ORTHO05D005070 1.5e-29 133.3 135 59.3
CDE04G3433 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 2.6e-29 132.5 145 56.6
Haze_04360 Corylus avellana HOM05D004404 ORTHO05D005070 4.4e-29 131.7 178 52.8
FAN02G1710 Fragaria x ananassa HOM05D004404 ORTHO05D005070 5.7e-29 131.3 131 58.0
CsaV3_1G039570 Cucumis sativus L. HOM05D004404 ORTHO05D005070 7.5e-29 131.0 155 58.1
Actinidia32805 Actinidia chinensis HOM05D004404 ORTHO05D005070 1.3e-28 130.2 144 55.6
Manes.09G153100 Manihot esculenta HOM05D004404 ORTHO05D005070 1.7e-28 129.8 149 57.7
PSO461G0019 Papaver somniferum HOM05D004404 ORTHO05D005070 2.2e-28 129.4 139 56.1
Ciclev10002770m.g Citrus clementina HOM05D004404 ORTHO05D005070 3.7e-28 128.6 150 52.7
Peaxi162Scf00282g00419 Petunia axillaris HOM05D004404 ORTHO05D005070 3.7e-28 128.6 149 59.1
DCAR_009267 Daucus carota HOM05D004404 ORTHO05D005070 4.8e-28 128.3 143 58.0
Duzib177G0223 Durio zibethinus HOM05D004404 ORTHO05D005070 8.2e-28 127.5 154 57.8
Gorai.013G200900 Gossypium raimondii HOM05D004404 ORTHO05D005070 8.2e-28 127.5 155 56.8
PGR004G0701 Punica granatum HOM05D004404 ORTHO05D005070 1.1e-27 127.1 160 55.0
Nitab4.5_0003279g0050 Nicotiana tabacum HOM05D004404 ORTHO05D005070 1.4e-27 126.7 152 52.6
TWI56G0209 Tripterygium wilfordii HOM05D004404 ORTHO05D005070 3.1e-27 125.6 126 55.6
MELO3C015378.2 Cucumis melo HOM05D004404 ORTHO05D005070 4.1e-27 125.2 159 56.6
Peaxi162Scf00071g00832 Petunia axillaris HOM05D004404 ORTHO05D005070 4.1e-27 125.2 143 53.8
CDE07G0487 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 5.3e-27 124.8 146 54.8
Oeu038443.2 Olea europaea HOM05D004404 ORTHO05D005070 5.3e-27 124.8 97 72.2
Gohir.D13G175500 Gossypium hirsutum HOM05D004404 ORTHO05D005070 7.0e-27 124.4 155 56.1
Rhsim07G0075300 Rhododendron simsii HOM05D004404 ORTHO05D005070 7.0e-27 124.4 151 55.0
Cpa.g.sc117.91 Carica papaya HOM05D004404 ORTHO05D005070 9.1e-27 124.0 155 52.3
RcHm_v2.0_Chr3g0451121 Rosa chinensis HOM05D004404 ORTHO05D005070 9.1e-27 124.0 139 55.4
Migut.N01913 Erythranthe guttata HOM05D004404 ORTHO05D005070 1.2e-26 123.6 152 55.3
vmacro13827 Vaccinium macrocarpon HOM05D004404 ORTHO05D005070 1.2e-26 123.6 144 55.6
Hma1.2p1_0083F.1_g042910 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 2.0e-26 122.9 149 53.7
Lsat_1_v5_gn_5_40280 Lactuca sativa HOM05D004404 ORTHO05D005070 3.5e-26 122.1 154 56.5
Solyc01g097310.3 Solanum lycopersicum HOM05D004404 ORTHO05D005070 3.5e-26 122.1 151 51.7
Migut.O00778 Erythranthe guttata HOM05D004404 ORTHO05D005070 5.9e-26 121.3 152 54.6
Sed0027735 Sechium edule HOM05D004404 ORTHO05D005070 5.9e-26 121.3 149 55.7
Nitab4.5_0008996g0030 Nicotiana tabacum HOM05D004404 ORTHO05D005070 7.7e-26 120.9 152 52.0
Sed0025331 Sechium edule HOM05D004404 ORTHO05D005070 7.7e-26 120.9 151 55.6
Psat3g007120 Pisum sativum HOM05D004404 ORTHO05D005070 1.0e-25 120.6 96 68.8
DCAR_006653 Daucus carota HOM05D004404 ORTHO05D005070 2.2e-25 119.4 132 59.1
HanXRQChr05g0158351 Helianthus annuus HOM05D004404 ORTHO05D005070 2.2e-25 119.4 146 54.8
Lalb_Chr02g0148831 Lupinus albus HOM05D004404 ORTHO05D005070 2.9e-25 119.0 145 54.5
BcaC06g30686 Brassica carinata HOM05D004404 ORTHO05D005070 3.8e-25 118.6 134 56.7
VMungo0540G1464 Vigna mungo HOM05D004404 ORTHO05D005070 3.8e-25 118.6 96 67.7
Sopen01g040980 Solanum pennellii HOM05D004404 ORTHO05D005070 5.0e-25 118.2 142 52.1
arahy.Tifrunner.gnm1.ann1.E7WHUM Arachis hypogaea HOM05D004404 ORTHO05D005070 6.5e-25 117.9 153 50.3
MD12G1241300 Malus domestica HOM05D004404 ORTHO05D005070 6.5e-25 117.9 138 57.2
TWI12G0609 Tripterygium wilfordii HOM05D004404 ORTHO05D005070 6.5e-25 117.9 137 56.2
Cc02_g30710 Coffea canephora HOM05D004404 ORTHO05D005070 8.5e-25 117.5 106 67.9
Sed0023665 Sechium edule HOM05D004404 ORTHO05D005070 8.5e-25 117.5 142 53.5
SGA_v2.0_scaffold80G25905 Striga asiatica HOM05D004404 ORTHO05D005070 1.1e-24 117.1 140 56.4
THA.LOC104821674 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 1.1e-24 117.1 141 55.3
AT5G28750 Arabidopsis thaliana HOM05D004404 ORTHO05D005070 1.5e-24 116.7 150 52.0
TPR.G6977 Trifolium pratense HOM05D004404 ORTHO05D005070 1.5e-24 116.7 91 71.4
Medtr7g115180 Medicago truncatula HOM05D004404 ORTHO05D005070 1.9e-24 116.3 91 72.5
A09p04970 Brassica napus HOM05D004404 ORTHO05D005070 3.2e-24 115.5 142 50.7
Phvul.006G101800 Phaseolus vulgaris HOM05D004404 ORTHO05D005070 3.2e-24 115.5 96 65.6
Cfa006425 Carpinus fangiana HOM05D004404 ORTHO05D005070 4.2e-24 115.2 152 53.9
Lj1g0028137 Lotus japonicus HOM05D004404 ORTHO05D005070 4.2e-24 115.2 139 54.7
arahy.Tifrunner.gnm1.ann1.Z087RK Arachis hypogaea HOM05D004404 ORTHO05D005070 5.5e-24 114.8 150 50.7
A06p38070 Brassica napus HOM05D004404 ORTHO05D005070 5.5e-24 114.8 143 52.4
BraA06t26722Z Brassica rapa HOM05D004404 ORTHO05D005070 5.5e-24 114.8 143 52.4
Thhalv10005085m.g Eutrema salsugineum HOM05D004404 ORTHO05D005070 5.5e-24 114.8 147 52.4
THA.LOC104805820 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 5.5e-24 114.8 147 50.3
BcaB04g19631 Brassica carinata HOM05D004404 ORTHO05D005070 7.2e-24 114.4 142 51.4
CAN.G134.95 Capsicum annuum HOM05D004404 ORTHO05D005070 7.2e-24 114.4 149 51.0
AL6G40780 Arabidopsis lyrata HOM05D004404 ORTHO05D005070 9.4e-24 114.0 151 52.3
BcaC04g23722 Brassica carinata HOM05D004404 ORTHO05D005070 9.4e-24 114.0 143 51.7
C09p05370 Brassica napus HOM05D004404 ORTHO05D005070 9.4e-24 114.0 143 51.7
BolC7t44551H Brassica oleracea HOM05D004404 ORTHO05D005070 9.4e-24 114.0 130 53.1
BolC9t53465H Brassica oleracea HOM05D004404 ORTHO05D005070 9.4e-24 114.0 143 51.7
Duzib106G1455 Durio zibethinus HOM05D004404 ORTHO05D005070 9.4e-24 114.0 154 52.6
BcaNung02110 Brassica carinata HOM05D004404 ORTHO05D005070 1.2e-23 113.6 144 52.1
C07p40140 Brassica napus HOM05D004404 ORTHO05D005070 1.2e-23 113.6 144 52.1
CARHR185320 Cardamine hirsuta HOM05D004404 ORTHO05D005070 1.2e-23 113.6 149 51.0
MD04G1224600 Malus domestica HOM05D004404 ORTHO05D005070 1.2e-23 113.6 139 51.8
Manes.08G134600 Manihot esculenta HOM05D004404 ORTHO05D005070 1.6e-23 113.2 149 51.0
Psat6g144600 Pisum sativum HOM05D004404 ORTHO05D005070 1.6e-23 113.2 149 53.7
Ca_09422_v3 Cicer arietinum L. HOM05D001346 ORTHO05D001205 2.7e-23 112.5 94 66.0
HPP92_017518 Vanilla planifolia HOM05D004404 ORTHO05D005070 2.7e-23 112.5 153 51.0
Carub.0006s2600 Capsella rubella HOM05D004404 ORTHO05D005070 3.6e-23 112.1 148 51.4
Ca_10045_v3 Cicer arietinum L. HOM05D004404 ORTHO05D005070 3.6e-23 112.1 141 56.0
Lsat_1_v5_gn_8_115981 Lactuca sativa HOM05D004404 ORTHO05D005070 4.7e-23 111.7 152 52.0
Hund06970 Selenicereus undatus HOM05D004404 ORTHO05D005070 4.7e-23 111.7 148 50.7
Hund22096 Selenicereus undatus HOM05D004404 ORTHO05D005070 4.7e-23 111.7 145 49.0
C02p57620 Brassica napus HOM05D004404 ORTHO05D005070 8.0e-23 110.9 134 49.3
Dinv04734 Davidia involucrata HOM05D004404 ORTHO05D005070 8.0e-23 110.9 109 62.4
Glyma.10G162200 Glycine max HOM05D004404 ORTHO05D005070 8.0e-23 110.9 142 51.4
Sc09g0003920 Simmondsia chinensis HOM05D004404 ORTHO05D005070 8.0e-23 110.9 134 52.2
Thecc.05G283400 Theobroma cacao HOM05D004404 ORTHO05D005070 8.0e-23 110.9 123 59.3
Glyma.19G244900 Glycine max HOM05D004404 ORTHO05D005070 1.0e-22 110.5 147 50.3
Lalb_Chr21g0310981 Lupinus albus HOM05D004404 ORTHO05D005070 1.8e-22 109.8 152 48.7
Nitab4.5_0001592g0040 Nicotiana tabacum HOM05D004404 ORTHO05D005070 2.3e-22 109.4 153 48.4
CDE07G0557 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 3.0e-22 109.0 140 49.3
Sp2g20060 Schrenkiella parvula HOM05D004404 ORTHO05D005070 4.0e-22 108.6 147 51.0
Glyma.03G247200 Glycine max HOM05D004404 ORTHO05D005070 5.2e-22 108.2 142 48.6
Lj5g0014543 Lotus japonicus HOM05D004404 ORTHO05D005070 5.2e-22 108.2 84 64.3
ATR0665G151 Amborella trichopoda HOM05D004404 ORTHO05D005070 6.8e-22 107.8 137 50.4
ECA246G2005 Erigeron canadensis HOM05D004404 ORTHO05D005070 6.8e-22 107.8 88 70.5
Medtr1g080910 Medicago truncatula HOM05D004404 ORTHO05D005070 6.8e-22 107.8 92 65.2
PSO210G4640 Papaver somniferum HOM05D004404 ORTHO05D005070 6.8e-22 107.8 110 59.1
Migut.B01092 Erythranthe guttata HOM05D004404 ORTHO05D005070 8.8e-22 107.5 129 54.3
Aqoxy2G03510 Aquilegia oxysepala HOM05D004404 ORTHO05D005070 1.5e-21 106.7 94 58.5
TPR.G12949 Trifolium pratense HOM05D001346 ORTHO05D001205 1.5e-21 106.7 146 52.7
ECA240G2961 Erigeron canadensis HOM05D004404 ORTHO05D005070 2.0e-21 106.3 89 71.9
Sed0015873 Sechium edule HOM05D004404 ORTHO05D005070 2.0e-21 106.3 109 56.9
BolC2t11835H Brassica oleracea HOM05D004404 ORTHO05D005070 2.6e-21 105.9 104 54.8
EL10Ac4g09141 Beta vulgaris HOM05D004404 ORTHO05D005070 3.4e-21 105.5 146 48.6
Os03g0634000 Oryza sativa ssp. japonica HOM05D004404 ORTHO05D005070 9.8e-21 104.0 66 77.3
PSO832G3549 Papaver somniferum HOM05D004404 ORTHO05D005070 9.8e-21 104.0 110 57.3
MSTRG.28017 Avicennia marina HOM05D004404 ORTHO05D005070 1.3e-20 103.6 148 50.7
AUR62001008 Chenopodium quinoa HOM05D004404 ORTHO05D005070 1.7e-20 103.2 93 61.3
Ah.04g162340 Amaranthus hybridus HOM05D004404 ORTHO05D005070 2.8e-20 102.4 153 47.7
QL03p025881 Quercus lobata HOM05D004404 ORTHO05D005070 3.7e-20 102.1 107 58.9
Aa31LG11G8580 Aethionema arabicum HOM05D004404 ORTHO05D005070 6.3e-20 101.3 164 45.1
COL.COLO4_15349 Corchorus olitorius HOM05D004404 ORTHO05D005070 6.3e-20 101.3 181 47.0
HanXRQChr09g0258871 Helianthus annuus HOM05D004404 ORTHO05D005070 6.3e-20 101.3 148 48.0
unitig_899.g14740 Utricularia gibba HOM05D000778 ORTHO05D005070 6.3e-20 101.3 145 46.2
Zm00001eb218840 Zea mays HOM05D004404 ORTHO05D005070 1.8e-19 99.8 92 63.0
QL03p026586 Quercus lobata HOM05D004404 ORTHO05D005070 2.4e-19 99.4 103 59.2
A02p38290 Brassica napus HOM05D004404 ORTHO05D005070 7.0e-19 97.8 88 60.2
SEGI_08397 Sequoiadendron giganteum HOM05D004404 ORTHO05D005070 7.0e-19 97.8 131 50.4
Gohir.A13G170100 Gossypium hirsutum HOM05D004404 ORTHO05D005070 9.1e-19 97.4 113 56.6
Sabra13G0037800 Salix brachista HOM05D004404 ORTHO05D005070 9.1e-19 97.4 105 57.1
PGSC0003DMG400019456 Solanum tuberosum HOM05D004404 ORTHO05D005070 1.2e-18 97.1 168 41.1
Oeu016441.1 Olea europaea HOM05D004404 ORTHO05D005070 7.7e-18 94.4 101 55.4
ClCG03G016400 Citrullus lanatus HOM05D004404 ORTHO05D005070 1.7e-17 93.2 201 43.8
Prupe.6G343300 Prunus persica HOM05D004404 ORTHO05D005070 1.7e-17 93.2 101 53.5
Mapoly0001s0151 Marchantia polymorpha HOM05D004404 ORTHO05D005070 3.8e-17 92.0 91 58.2
COL.COLO4_00126 Corchorus olitorius HOM05D004404 ORTHO05D005070 5.0e-17 91.7 109 56.0
BcaC03g17750 Brassica carinata HOM05D004404 ORTHO05D005070 6.5e-17 91.3 134 42.5
SalBow8G4983 Salvia bowleyana HOM05D004404 ORTHO05D005070 8.6e-17 90.9 105 53.3
Pp3c8_14190 Physcomitrium patens HOM05D004404 ORTHO05D005070 1.5e-16 90.1 132 48.5
SGA_v2.0_scaffold81G26090 Striga asiatica HOM05D004404 ORTHO05D005070 1.5e-16 90.1 83 60.2
Oeu027474.1 Olea europaea HOM05D004404 ORTHO05D005070 2.5e-16 89.4 106 53.8
Glyma.20G224600 Glycine max HOM05D004404 ORTHO05D005070 4.2e-16 88.6 105 50.5
Pp3c15_9990 Physcomitrium patens HOM05D004404 ORTHO05D005070 9.5e-16 87.4 93 59.1
AagrBONN_evm.TU.Sc2ySwM_117.2792 Anthoceros agrestis HOM05D004404 ORTHO05D005070 2.8e-15 85.9 47 87.2
SMO174G0006 Selaginella moellendorffii HOM05D004404 ORTHO05D005070 6.1e-15 84.7 101 50.5
MSTRG.20447 Avicennia marina HOM05D004404 ORTHO05D005070 8.0e-15 84.3 105 48.6
CBR_g20020 Chara braunii HOM05D004404 ORTHO05D005070 1.4e-14 83.6 95 50.5
Zm00001eb051040 Zea mays HOM05D004404 ORTHO05D005070 5.2e-14 81.6 47 78.7
Cre10.g438550 Chlamydomonas reinhardtii HOM05D004404 ORTHO05D005070 2.6e-13 79.3 79 54.4
MCO09G790 Micromonas commoda HOM05D004404 ORTHO05D005070 3.4e-13 79.0 63 61.9
MD16G1158600 Malus domestica HOM05D004404 ORTHO05D005070 2.8e-12 75.9 51 70.6
Potri.013G040900 Populus trichocarpa HOM05D004404 ORTHO05D005070 2.8e-12 75.9 146 42.5
BraA02t08810Z Brassica rapa HOM05D004404 ORTHO05D005070 2.0e-10 69.7 107 50.5
SGA_v2.0_scaffold55G19806 Striga asiatica HOM05D004404 ORTHO05D005070 3.5e-10 68.9 42 76.2
Nitab4.5_0013900g0010 Nicotiana tabacum HOM05D004404 ORTHO05D005070 1.7e-09 66.6 101 44.6
Zm00001eb421330 Zea mays HOM05D005376 ORTHO05D006481 6.1e-07 58.2 73 43.8
ClCG05G008230 Citrullus lanatus HOM05D005376 ORTHO05D006481 8.0e-07 57.8 53 49.1
CDE09G0642 Ceratophyllum demersum HOM05D005376 ORTHO05D006481 1.4e-06 57.0 72 47.2
CANSAT21G2457 Cannabis sativa HOM05D005376 ORTHO05D006481 5.2e-06 55.1 91 42.9
Manes.14G024100 Manihot esculenta HOM05D005376 ORTHO05D006481 5.2e-06 55.1 60 45.0
GSVIVG01028894001 Vitis vinifera HOM05D005376 ORTHO05D006481 5.2e-06 55.1 60 48.3
FvH4_7g29980 Fragaria vesca HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN01G1606 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN03G2197 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN03G2430 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN06G2500 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN06G2733 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN10G0028 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
FAN10G2308 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
MD07G1276100 Malus domestica HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
Manes.06G150900 Manihot esculenta HOM05D005376 ORTHO05D006481 6.8e-06 54.7 59 44.1
RcHm_v2.0_Chr1g0377931 Rosa chinensis HOM05D005376 ORTHO05D006481 6.8e-06 54.7 60 45.0
SGA_v2.0_scaffold44G16739 Striga asiatica HOM05D005376 ORTHO05D006481 6.8e-06 54.7 87 39.1
Zm00001eb085050 Zea mays HOM05D005376 ORTHO05D006481 6.8e-06 54.7 94 37.2


User provided reference genes

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