Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 3.7e-196 688.7 564 100.0
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 9.5e-168 594.3 566 86.6
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 2.8e-103 380.2 571 69.5
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 3.9e-97 359.8 582 58.4
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 7.9e-90 335.5 559 58.5
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 9.1e-86 322.0 570 55.3
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 1.1e-83 315.1 575 53.7
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 1.9e-83 314.3 599 56.4
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 2.5e-83 313.9 567 59.4
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 4.2e-83 313.2 456 61.2
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 1.8e-81 307.8 558 63.4
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 1.8e-81 307.8 558 63.3
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 6.7e-81 305.8 558 60.4
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 6.7e-81 305.8 561 57.2
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 3.3e-80 303.5 549 61.6
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 9.7e-80 302.0 565 63.0
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 9.7e-80 302.0 562 56.9
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 2.2e-79 300.8 562 55.5
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 3.1e-78 297.0 544 59.0
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 5.3e-78 296.2 550 62.9
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 7.0e-78 295.8 551 58.6
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 9.1e-78 295.4 555 63.1
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 9.1e-78 295.4 553 65.3
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 1.2e-77 295.0 533 71.5
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 2.0e-77 294.3 596 61.4
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 4.5e-77 293.1 465 63.2
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 5.9e-77 292.7 595 60.5
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.0e-76 292.0 602 64.3
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 1.0e-76 292.0 561 52.9
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 1.3e-76 291.6 556 57.9
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 2.2e-76 290.8 542 57.9
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 2.9e-76 290.4 553 57.9
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 2.9e-76 290.4 476 52.9
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 5.0e-76 289.7 600 59.5
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 5.0e-76 289.7 553 59.5
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 5.0e-76 289.7 554 62.1
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 5.0e-76 289.7 542 59.4
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 6.5e-76 289.3 558 62.2
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 6.5e-76 289.3 593 55.1
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 1.1e-75 288.5 555 60.4
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 1.4e-75 288.1 557 57.5
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 4.2e-75 286.6 553 63.8
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 7.2e-75 285.8 558 60.9
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 7.2e-75 285.8 164 87.2
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 9.4e-75 285.4 565 67.8
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 1.6e-74 284.6 502 60.6
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 2.1e-74 284.3 468 69.0
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 4.7e-74 283.1 513 55.2
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 6.1e-74 282.7 572 55.2
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 1.0e-73 282.0 552 47.8
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 1.4e-73 281.6 169 82.8
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.0e-73 280.4 559 57.6
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 6.7e-73 279.3 575 53.0
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 8.8e-73 278.9 164 86.0
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 2.0e-72 277.7 486 59.9
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 2.6e-72 277.3 163 85.9
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 2.6e-72 277.3 576 53.3
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 2.6e-72 277.3 563 52.0
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 3.3e-72 276.9 465 62.4
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 5.7e-72 276.2 581 50.3
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 5.7e-72 276.2 558 64.9
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 7.4e-72 275.8 168 83.9
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 7.4e-72 275.8 475 59.4
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 1.7e-71 274.6 565 55.2
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 2.8e-71 273.9 581 58.3
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 2.8e-71 273.9 173 82.7
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 3.7e-71 273.5 555 63.6
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 4.8e-71 273.1 568 46.1
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 6.3e-71 272.7 459 68.4
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 1.1e-70 271.9 570 58.9
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.1e-70 271.9 570 59.1
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.4e-70 271.6 170 81.8
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 1.4e-70 271.6 572 55.1
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 1.8e-70 271.2 596 55.5
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 4.1e-70 270.0 161 85.7
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 9.1e-70 268.9 571 59.2
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 2.0e-69 267.7 572 54.5
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 4.5e-69 266.5 551 48.8
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 7.7e-69 265.8 160 82.5
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 1.0e-68 265.4 475 60.6
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 2.9e-68 263.8 172 80.2
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 2.9e-68 263.8 162 84.0
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 6.5e-68 262.7 576 56.6
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 6.5e-68 262.7 561 60.4
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 8.5e-68 262.3 563 62.2
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 1.9e-67 261.2 165 81.8
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 2.5e-67 260.8 543 64.5
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 2.5e-67 260.8 588 54.9
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 3.2e-67 260.4 589 53.3
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 1.2e-66 258.5 172 79.1
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 3.6e-66 256.9 562 54.8
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 4.7e-66 256.5 165 79.4
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 6.1e-66 256.1 166 78.9
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 1.0e-65 255.4 469 60.8
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 1.4e-65 255.0 165 78.8
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 3.0e-65 253.8 167 78.4
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 2.0e-64 251.1 170 78.8
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 2.6e-64 250.8 458 64.6
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 5.7e-64 249.6 457 63.9
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 5.7e-64 249.6 551 65.5
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 5.7e-64 249.6 179 74.3
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 5.7e-64 249.6 179 74.3
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 1.3e-63 248.4 154 83.1
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 2.2e-63 247.7 451 57.2
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 4.8e-63 246.5 172 73.3
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 6.3e-63 246.1 554 58.3
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 6.3e-63 246.1 171 74.9
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 8.3e-63 245.7 170 76.5
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 1.1e-62 245.4 511 59.3
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 2.4e-62 244.2 461 64.9
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 5.3e-62 243.0 173 72.8
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 5.3e-62 243.0 460 63.5
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 1.2e-61 241.9 173 72.8
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 4.5e-61 240.0 579 57.5
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 3.8e-60 236.9 456 62.1
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 2.5e-59 234.2 135 85.2
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 2.5e-59 234.2 135 85.2
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 4.2e-59 233.4 155 77.4
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 7.2e-59 232.6 134 85.1
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 9.4e-59 232.3 133 85.7
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 2.1e-58 231.1 457 53.8
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 3.6e-58 230.3 133 85.0
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 4.7e-58 229.9 132 85.6
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 8.0e-58 229.2 132 85.6
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 2.3e-57 227.6 134 83.6
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 2.3e-57 227.6 126 88.1
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 5.2e-57 226.5 136 82.4
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 1.2e-56 225.3 541 47.1
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 2.0e-56 224.6 163 73.0
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 4.4e-56 223.4 455 54.1
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 1.3e-55 221.9 129 84.5
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 1.3e-55 221.9 133 82.0
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 8.3e-55 219.2 129 83.7
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 1.1e-54 218.8 132 81.8
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 1.4e-54 218.4 174 70.7
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 5.4e-54 216.5 167 69.5
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 1.6e-53 214.9 130 81.5
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 3.5e-53 213.8 127 85.0
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 2.3e-52 211.1 165 70.3
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 5.0e-52 209.9 139 79.1
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 5.0e-52 209.9 139 79.1
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 1.9e-51 208.0 173 66.5
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 2.2e-47 194.5 402 65.7
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 6.3e-47 193.0 113 85.0
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 5.6e-43 179.9 101 88.1
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 7.3e-43 179.5 124 76.6
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 3.6e-42 177.2 163 58.9
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 2.6e-40 171.0 145 67.6
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 2.6e-40 171.0 157 61.8
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 4.4e-40 170.2 132 69.7
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 2.4e-38 164.5 104 78.8
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 6.0e-37 159.8 103 75.7
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 9.5e-35 152.5 161 56.5
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 1.2e-34 152.1 105 70.5
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 6.8e-33 146.4 100 69.0
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 4.6e-29 133.7 84 77.4
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 2.3e-28 131.3 103 57.3
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 3.0e-28 131.0 84 76.2
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 5.1e-28 130.2 71 91.5
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 1.6e-26 125.2 164 47.6
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 1.2e-24 119.0 85 68.2
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 3.4e-24 117.5 85 67.1
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.0e-20 105.9 477 53.0
Lj1A173G45 Lonicera japonica HOM05D003848 ORTHO05D004616 3.9e-20 104.0 167 46.1
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 5.1e-20 103.6 68 75.0
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 8.6e-20 102.8 66 75.8
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 1.1e-19 102.4 65 76.9
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 1.5e-19 102.1 56 91.1
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 4.3e-19 100.5 478 41.2
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 5.2e-17 93.6 68 70.6
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 4.4e-16 90.5 53 83.0
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 5.8e-16 90.1 56 82.1
FAN22G0082 Fragaria x ananassa HOM05D003848 ORTHO05D035678 1.2e-13 82.4 205 47.3
C03p93060 Brassica napus HOM05D003848 ORTHO05D004616 1.5e-11 75.5 83 55.4
BcaC01g01557 Brassica carinata HOM05D003848 ORTHO05D004616 2.1e-10 71.6 83 54.2
BraA09t40883Z Brassica rapa HOM05D003848 ORTHO05D004616 4.8e-10 70.5 85 54.1
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 1.2e-08 65.9 45 73.3


User provided reference genes

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