Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 7.3e-98 360.5 180 100.0
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 1.2e-71 273.5 146 88.4
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 7.6e-71 270.8 149 84.6
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 8.5e-70 267.3 146 85.6
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 1.2e-68 263.5 146 83.6
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.6e-68 263.1 146 83.6
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.6e-68 263.1 146 83.6
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.6e-68 263.1 146 82.2
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 2.1e-68 262.7 146 81.5
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 2.1e-68 262.7 146 82.9
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 2.1e-68 262.7 147 84.4
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 3.6e-68 261.9 146 82.2
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 4.6e-68 261.5 146 82.9
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 6.1e-68 261.2 146 82.9
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 7.9e-68 260.8 146 83.6
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 7.9e-68 260.8 145 82.8
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 1.0e-67 260.4 146 82.9
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 1.0e-67 260.4 146 82.9
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 1.8e-67 259.6 146 82.2
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 2.3e-67 259.2 146 82.2
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.0e-67 258.8 146 82.2
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 3.9e-67 258.5 146 81.5
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.9e-67 258.5 198 64.6
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 6.7e-67 257.7 146 80.8
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 6.7e-67 257.7 163 76.1
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 6.7e-67 257.7 146 81.5
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 8.7e-67 257.3 146 80.8
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 8.7e-67 257.3 146 80.1
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.1e-66 256.9 146 81.5
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 1.5e-66 256.5 146 80.1
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.5e-66 256.5 146 80.8
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.9e-66 256.1 147 81.6
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 3.3e-66 255.4 163 75.5
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 4.3e-66 255.0 145 80.0
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 4.3e-66 255.0 146 81.5
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 4.3e-66 255.0 145 82.1
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 4.3e-66 255.0 146 79.5
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 5.7e-66 254.6 144 80.6
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 7.4e-66 254.2 191 66.0
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 9.7e-66 253.8 163 74.2
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.6e-65 253.1 163 73.6
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.6e-65 253.1 146 80.1
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 2.8e-65 252.3 146 80.8
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 3.7e-65 251.9 146 80.1
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 3.7e-65 251.9 196 67.9
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 4.8e-65 251.5 193 65.3
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 4.8e-65 251.5 147 80.3
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 6.3e-65 251.1 194 64.9
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 8.2e-65 250.8 146 80.1
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 8.2e-65 250.8 196 67.3
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.8e-64 249.6 146 80.1
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 1.8e-64 249.6 196 64.8
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.4e-64 249.2 145 78.6
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 4.1e-64 248.4 146 76.7
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 5.3e-64 248.1 146 77.4
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 5.3e-64 248.1 196 64.3
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 6.9e-64 247.7 145 77.9
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 6.9e-64 247.7 145 77.9
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 2.0e-63 246.1 163 73.6
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 2.6e-63 245.7 146 77.4
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 2.6e-63 245.7 147 76.9
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 4.5e-63 245.0 146 76.0
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 4.5e-63 245.0 146 77.4
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 5.9e-63 244.6 146 75.3
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 1.7e-62 243.0 146 76.0
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.7e-62 243.0 146 75.3
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 2.2e-62 242.7 146 75.3
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 2.9e-62 242.3 146 75.3
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 3.8e-62 241.9 146 75.3
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 5.0e-62 241.5 146 76.7
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 5.0e-62 241.5 163 70.6
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 1.4e-61 240.0 192 64.1
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 4.2e-61 238.4 161 69.6
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 1.6e-60 236.5 147 72.8
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 1.6e-60 236.5 146 72.6
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 2.7e-60 235.7 146 73.3
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 2.7e-60 235.7 146 73.3
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 7.9e-60 234.2 145 75.2
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 1.8e-59 233.0 177 63.8
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 3.9e-59 231.9 146 71.9
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 8.8e-59 230.7 206 58.3
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 9.7e-58 227.3 125 84.0
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 4.8e-57 224.9 191 62.3
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 6.3e-57 224.6 127 81.1
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 8.2e-57 224.2 183 62.3
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 1.0e-54 217.2 148 68.9
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 3.8e-54 215.3 223 55.6
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.9e-53 213.0 194 55.2
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 4.2e-53 211.8 154 68.2
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 2.3e-51 206.1 131 74.8
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 3.0e-51 205.7 146 62.3
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 3.0e-51 205.7 151 62.9
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.9e-51 205.3 164 61.6
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 3.3e-50 202.2 118 79.7
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 4.4e-50 201.8 115 82.6
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 4.4e-50 201.8 140 70.0
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 2.2e-49 199.5 191 52.4
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 3.1e-48 195.7 190 57.4
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 1.9e-45 186.4 115 76.5
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 3.1e-40 169.1 151 59.6
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 3.1e-40 169.1 151 59.6
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 4.1e-40 168.7 285 36.8
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 1.7e-38 163.3 98 76.5
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 4.2e-37 158.7 108 67.6
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 7.2e-37 157.9 172 47.7
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 6.1e-36 154.8 145 56.6
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 5.9e-31 138.3 81 79.0
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 1.1e-29 134.0 69 87.0
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 2.2e-25 119.8 131 49.6
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 2.1e-12 76.6 43 79.1
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-08 64.3 36 77.8
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.4e-08 63.9 35 80.0
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 4.1e-08 62.4 29 96.6


User provided reference genes

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