Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1810.0 889 100.0
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1457.2 870 84.4
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 0.0e+00 1400.6 874 79.2
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 0.0e+00 1300.8 866 74.9
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 0.0e+00 1282.3 863 75.1
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 0.0e+00 1276.9 861 74.7
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 0.0e+00 1276.5 864 74.9
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1274.6 870 73.9
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1267.3 863 73.7
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 0.0e+00 1266.5 869 73.9
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 0.0e+00 1266.5 910 71.4
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 0.0e+00 1263.1 848 75.5
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1262.7 886 72.7
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 0.0e+00 1253.4 867 72.9
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1251.9 875 72.8
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 0.0e+00 1251.1 860 74.0
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1251.1 863 73.0
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 0.0e+00 1250.3 902 70.6
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1247.6 867 73.4
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1247.6 863 72.5
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1246.9 863 72.9
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 0.0e+00 1245.7 857 74.0
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1240.7 866 71.8
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1240.3 862 73.1
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 0.0e+00 1234.2 862 73.1
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1229.5 898 69.7
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1227.2 875 71.1
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1226.1 833 73.5
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1221.1 870 71.0
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1213.0 892 70.2
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 0.0e+00 1212.6 858 71.7
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1208.4 883 69.3
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 0.0e+00 1208.0 863 71.1
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1205.7 869 69.9
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 0.0e+00 1204.5 875 68.7
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 0.0e+00 1203.7 871 69.1
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1201.4 890 70.2
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1201.0 861 71.7
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1199.9 864 71.2
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1199.9 879 70.0
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 0.0e+00 1198.7 859 71.4
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1197.6 890 70.0
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 0.0e+00 1196.4 906 67.3
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 0.0e+00 1195.6 883 69.4
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 0.0e+00 1194.9 898 69.3
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 0.0e+00 1192.9 864 71.4
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1192.2 879 70.2
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 0.0e+00 1189.9 907 66.3
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1189.5 863 69.6
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 0.0e+00 1188.7 863 71.5
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 0.0e+00 1188.3 907 66.2
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 0.0e+00 1184.1 891 68.4
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1183.7 892 68.5
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1181.4 879 69.3
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 0.0e+00 1178.7 880 69.0
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 0.0e+00 1178.3 864 68.5
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1177.9 879 69.2
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1176.8 891 68.1
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1175.6 870 69.3
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1174.5 915 66.8
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 0.0e+00 1171.4 891 68.6
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1170.6 874 69.2
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1169.5 860 69.8
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 0.0e+00 1169.1 887 67.9
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1168.7 860 69.2
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1167.9 866 69.2
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1167.1 860 68.8
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1166.8 916 66.3
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 0.0e+00 1166.8 879 67.9
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 0.0e+00 1166.0 873 67.9
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 0.0e+00 1164.1 878 67.5
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 0.0e+00 1163.7 869 69.2
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 0.0e+00 1156.7 895 67.3
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1151.7 899 67.2
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1150.2 899 65.6
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1150.2 872 67.4
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 0.0e+00 1149.0 916 65.2
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1144.8 874 67.8
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1144.0 865 69.0
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 0.0e+00 1143.3 868 68.7
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 0.0e+00 1141.7 942 63.0
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1130.2 862 68.6
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1127.5 876 66.3
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1119.0 861 67.0
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1118.6 861 67.1
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1118.6 867 66.9
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 0.0e+00 1110.5 883 64.6
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 0.0e+00 1109.7 877 65.9
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1109.7 871 65.7
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1109.4 924 63.4
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 0.0e+00 1108.2 861 66.8
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1108.2 862 66.8
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 0.0e+00 1103.6 873 65.9
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 0.0e+00 1097.0 872 65.1
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 0.0e+00 1096.3 883 64.8
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 0.0e+00 1095.5 896 64.2
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 0.0e+00 1094.3 882 64.3
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 0.0e+00 1092.8 884 64.9
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 0.0e+00 1092.4 881 65.7
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 0.0e+00 1088.6 883 64.9
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1087.0 743 73.2
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 0.0e+00 1083.6 942 59.7
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 0.0e+00 1080.1 844 66.8
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 0.0e+00 1079.3 892 64.8
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 0.0e+00 1077.8 867 65.3
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 0.0e+00 1077.0 884 64.3
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 0.0e+00 1075.8 879 65.3
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 0.0e+00 1075.5 896 63.3
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 3.0e-311 1071.6 878 63.4
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 4.3e-311 1071.2 863 64.5
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 3.5e-310 1068.1 878 63.3
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 3.5e-310 1068.1 863 64.8
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 1.5e-308 1062.8 889 63.6
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 1.9e-308 1062.4 879 63.4
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 7.3e-308 1060.4 873 63.5
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 2.1e-307 1058.9 601 87.2
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 3.6e-307 1058.1 828 66.1
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 6.4e-304 1047.3 808 66.0
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 4.3e-300 1034.6 861 62.0
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 1.1e-298 1030.0 790 66.2
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 2.5e-295 1018.8 822 66.5
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 1.2e-294 1016.5 819 63.1
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 4.6e-294 1014.6 883 61.3
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 7.6e-289 997.3 901 60.9
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 3.8e-288 995.0 865 60.1
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 1.2e-286 989.9 950 56.9
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.9e-284 982.6 915 58.3
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 8.2e-283 977.2 915 57.8
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 1.8e-282 976.1 820 61.5
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 2.1e-278 962.6 588 79.3
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.0e-272 943.7 827 59.6
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 8.5e-272 940.6 877 57.5
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 1.0e-269 933.7 879 55.5
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 2.0e-268 929.5 813 58.7
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 4.2e-263 911.8 862 55.3
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 2.5e-255 885.9 900 55.2
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 7.2e-255 884.4 810 55.8
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 2.4e-250 869.4 805 56.6
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 1.0e-245 854.0 873 53.4
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.8e-245 853.2 658 65.0
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 5.2e-237 825.1 805 55.2
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 2.1e-222 776.5 568 70.4
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 9.8e-220 767.7 851 46.9
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 1.6e-217 760.4 570 63.3
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 2.7e-217 759.6 865 47.3
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.2e-209 734.2 885 45.3
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 3.4e-196 689.5 624 54.3
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 1.3e-192 677.6 635 58.1
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 1.4e-189 667.5 635 57.0
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 5.7e-175 619.0 579 57.5
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 4.8e-174 615.9 877 42.4
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 1.1e-170 604.7 492 62.2
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 1.9e-146 524.2 569 47.1
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 7.5e-135 485.7 433 59.1
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 2.2e-118 431.0 606 39.4
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.9e-118 430.6 469 50.5
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 5.4e-117 426.4 511 48.1
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 7.3e-106 389.4 401 55.4
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 8.6e-99 365.9 696 32.8
BolC4t23456H Brassica oleracea HOM05D003973 ORTHO05D004679 2.9e-94 350.9 264 63.6
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 4.4e-87 327.0 225 69.3
C04p19230 Brassica napus HOM05D003973 ORTHO05D004679 1.4e-77 295.4 264 56.8
BcaC02g11207 Brassica carinata HOM05D003973 ORTHO05D004679 5.8e-71 273.5 175 71.4
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 3.1e-64 251.1 520 29.4
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 2.7e-60 238.0 505 29.1
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 2.5e-58 231.5 156 71.8
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 8.2e-33 146.7 179 49.2
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 6.5e-30 137.1 213 42.7
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 1.8e-19 102.4 73 63.0
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 5.2e-19 100.9 137 45.3
CSS0024912 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 1.2e-18 99.8 96 59.4
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 4.8e-17 94.4 119 49.6
VMungo0720G0978 Vigna mungo HOM05D003973 ORTHO05D435101 2.7e-12 78.6 181 32.0
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 1.0e-11 76.6 52 67.3
ATR1132G061 Amborella trichopoda HOM05D003973 ORTHO05D062324 3.8e-06 58.2 66 47.0


User provided reference genes

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