Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0676 Trochodendron aralioides HOM05D004391 ORTHO05D005193 4.3e-138 494.6 240 100.0
TAR369G0568 Trochodendron aralioides HOM05D004391 ORTHO05D005193 1.9e-32 143.7 72 93.1
Nn5g27585 Nelumbo nucifera HOM05D004391 ORTHO05D005193 3.5e-31 139.4 72 88.9
Dinv12291 Davidia involucrata HOM05D000139 ORTHO05D000103 7.9e-31 138.3 73 90.4
Nn5g26793 Nelumbo nucifera HOM05D004391 ORTHO05D005193 3.9e-30 136.0 72 87.5
CSS0038074 Camellia sinensis var. sinensis HOM05D004391 ORTHO05D005193 4.3e-29 132.5 72 84.7
CANSAT80G1344 Cannabis sativa HOM05D004391 ORTHO05D005193 5.7e-29 132.1 72 83.3
Eucgr.G03166 Eucalyptus grandis HOM05D004391 ORTHO05D005193 5.7e-29 132.1 72 84.7
Manes.18G125100 Manihot esculenta HOM05D004391 ORTHO05D005193 5.7e-29 132.1 72 86.1
CiPaw.05G185700 Carya illinoinensis HOM05D004391 ORTHO05D005193 7.4e-29 131.7 70 87.1
Potri.019G132000 Populus trichocarpa HOM05D004391 ORTHO05D005193 7.4e-29 131.7 72 84.7
Sc15g0002370 Simmondsia chinensis HOM05D004391 ORTHO05D005193 7.4e-29 131.7 70 82.9
Cfa009172 Carpinus fangiana HOM05D004391 ORTHO05D005193 9.7e-29 131.3 72 83.3
Cpa.g.sc2.267 Carica papaya HOM05D004391 ORTHO05D005193 1.3e-28 131.0 72 84.7
TWI09G0083 Tripterygium wilfordii HOM05D004391 ORTHO05D005193 1.6e-28 130.6 72 83.3
Oeu025053.1 Olea europaea HOM05D004391 ORTHO05D005193 2.8e-28 129.8 72 83.3
CSS0036971 Camellia sinensis var. sinensis HOM05D004391 ORTHO05D005193 3.7e-28 129.4 72 81.9
Prupe.6G038800 Prunus persica HOM05D004391 ORTHO05D005193 3.7e-28 129.4 72 83.3
TWI53G1180 Tripterygium wilfordii HOM05D004391 ORTHO05D005193 3.7e-28 129.4 72 83.3
GSVIVG01024232001 Vitis vinifera HOM05D004391 ORTHO05D005193 4.8e-28 129.0 72 80.6
Ciclev10033444m.g Citrus clementina HOM05D004391 ORTHO05D005193 6.3e-28 128.6 72 83.3
MD03G1047800 Malus domestica HOM05D004391 ORTHO05D005193 6.3e-28 128.6 72 83.3
Nitab4.5_0003194g0030 Nicotiana tabacum HOM05D004391 ORTHO05D005193 6.3e-28 128.6 72 81.9
PGR142G4161 Punica granatum HOM05D004391 ORTHO05D005193 6.3e-28 128.6 72 81.9
Duzib128G1816 Durio zibethinus HOM05D004391 ORTHO05D005193 8.2e-28 128.3 72 83.3
Duzib114G0048 Durio zibethinus HOM05D004391 ORTHO05D005193 1.1e-27 127.9 72 83.3
Gorai.012G013200 Gossypium raimondii HOM05D004391 ORTHO05D005193 1.1e-27 127.9 82 76.8
Ciclev10010097m.g Citrus clementina HOM05D004391 ORTHO05D005193 1.4e-27 127.5 72 81.9
Nitab4.5_0000311g0070 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.4e-27 127.5 72 80.6
Nitab4.5_0000105g0300 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.8e-27 127.1 72 80.6
Peaxi162Scf00131g10129 Petunia axillaris HOM05D004391 ORTHO05D005193 1.8e-27 127.1 72 79.2
GSVIVG01024535001 Vitis vinifera HOM05D004391 ORTHO05D005193 2.4e-27 126.7 72 79.2
Haze_12207 Corylus avellana HOM05D004391 ORTHO05D005193 3.1e-27 126.3 72 80.6
Solyc06g007540.3 Solanum lycopersicum HOM05D004391 ORTHO05D005193 4.1e-27 125.9 72 79.2
Sopen06g002450 Solanum pennellii HOM05D004391 ORTHO05D005193 4.1e-27 125.9 72 79.2
HPP92_000080 Vanilla planifolia HOM05D004391 ORTHO05D005193 4.1e-27 125.9 70 82.9
HPP92_003137 Vanilla planifolia HOM05D004391 ORTHO05D005193 4.1e-27 125.9 72 80.6
Hma1.2p1_0170F.1_g075340 Hydrangea macrophylla HOM05D004391 ORTHO05D005193 5.3e-27 125.6 72 79.2
RcHm_v2.0_Chr4g0441891 Rosa chinensis HOM05D004391 ORTHO05D005193 6.9e-27 125.2 72 79.2
RcHm_v2.0_Chr5g0073771 Rosa chinensis HOM05D004391 ORTHO05D005193 6.9e-27 125.2 70 82.9
THA.LOC109117202 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 6.9e-27 125.2 72 80.6
Peaxi162Scf00455g00003 Petunia axillaris HOM05D004391 ORTHO05D005193 9.0e-27 124.8 72 77.8
Ciclev10013576m.g Citrus clementina HOM05D004391 ORTHO05D005193 1.2e-26 124.4 72 80.6
Gohir.A05G404700 Gossypium hirsutum HOM05D004391 ORTHO05D005193 1.2e-26 124.4 72 80.6
Solyc06g082680.4 Solanum lycopersicum HOM05D004391 ORTHO05D005193 1.2e-26 124.4 72 77.8
Sopen06g034070 Solanum pennellii HOM05D004391 ORTHO05D005193 1.2e-26 124.4 72 77.8
Gohir.D04G011000 Gossypium hirsutum HOM05D004391 ORTHO05D005193 1.5e-26 124.0 72 80.6
CAN.G181.27 Capsicum annuum HOM05D004391 ORTHO05D005193 2.0e-26 123.6 72 80.6
MELO3C010670.2 Cucumis melo HOM05D004391 ORTHO05D005193 2.0e-26 123.6 72 76.4
Gohir.D13G008800 Gossypium hirsutum HOM05D004391 ORTHO05D005193 2.0e-26 123.6 72 79.2
FvH4_4g32870 Fragaria vesca HOM05D004391 ORTHO05D005193 2.6e-26 123.2 72 77.8
FAN12G3281 Fragaria x ananassa HOM05D004391 ORTHO05D005193 2.6e-26 123.2 72 77.8
FAN25G0672 Fragaria x ananassa HOM05D004391 ORTHO05D000090 2.6e-26 123.2 71 78.9
Glyma.02G237700 Glycine max HOM05D004391 ORTHO05D005193 2.6e-26 123.2 72 79.2
Gohir.A13G008200 Gossypium hirsutum HOM05D004391 ORTHO05D005193 2.6e-26 123.2 72 79.2
PGSC0003DMG400030477 Solanum tuberosum HOM05D004391 ORTHO05D005193 2.6e-26 123.2 72 76.4
THA.LOC104823167 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 2.6e-26 123.2 70 81.4
Glyma.14G206700 Glycine max HOM05D004391 ORTHO05D005193 3.4e-26 122.9 72 79.2
Aa31LG3G3850 Aethionema arabicum HOM05D004391 ORTHO05D005193 4.5e-26 122.5 70 78.6
Os06g0175900 Oryza sativa ssp. japonica HOM05D004391 ORTHO05D005193 4.5e-26 122.5 72 77.8
Os06g0177000 Oryza sativa ssp. japonica HOM05D004391 ORTHO05D005193 4.5e-26 122.5 72 77.8
THA.LOC104816504 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 4.5e-26 122.5 70 81.4
Lalb_Chr10g0103971 Lupinus albus HOM05D004391 ORTHO05D005193 5.9e-26 122.1 72 77.8
Zm00001eb375180 Zea mays HOM05D004391 ORTHO05D005193 5.9e-26 122.1 72 77.8
ClCG08G017940 Citrullus lanatus HOM05D004391 ORTHO05D005193 7.6e-26 121.7 72 75.0
MD13G1094500 Malus domestica HOM05D004391 ORTHO05D005193 7.6e-26 121.7 72 77.8
Prupe.1G250900 Prunus persica HOM05D004391 ORTHO05D005193 7.6e-26 121.7 72 77.8
FvH4_3g40960 Fragaria vesca HOM05D004391 ORTHO05D005193 1.0e-25 121.3 70 78.6
FAN07G1869 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.0e-25 121.3 72 76.4
FAN11G0346 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.0e-25 121.3 70 78.6
FAN16G3113 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.0e-25 121.3 70 78.6
FAN17G0118 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.0e-25 121.3 72 76.4
FAN22G1549 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.0e-25 121.3 72 76.4
Lalb_Chr04g0251641 Lupinus albus HOM05D004391 ORTHO05D005193 1.0e-25 121.3 72 76.4
Cc01_g15470 Coffea canephora HOM05D004391 ORTHO05D005193 1.3e-25 120.9 72 73.6
Thecc.10G186500 Theobroma cacao HOM05D004391 ORTHO05D005193 1.3e-25 120.9 72 76.4
unitig_747.g21439 Utricularia gibba HOM05D001024 ORTHO05D000878 1.3e-25 120.9 72 76.4
CAN.G874.64 Capsicum annuum HOM05D004391 ORTHO05D005193 1.7e-25 120.6 72 75.0
COL.COLO4_19488 Corchorus olitorius HOM05D004391 ORTHO05D005193 1.7e-25 120.6 72 80.6
BcaB01g05713 Brassica carinata HOM05D004391 ORTHO05D005193 2.2e-25 120.2 70 75.7
CARHR207860 Cardamine hirsuta HOM05D004391 ORTHO05D005193 2.2e-25 120.2 70 75.7
MD16G1095600 Malus domestica HOM05D004391 ORTHO05D005193 2.2e-25 120.2 72 76.4
arahy.Tifrunner.gnm1.ann1.M2MMUV Arachis hypogaea HOM05D004391 ORTHO05D005193 2.9e-25 119.8 72 77.8
BcaC06g32250 Brassica carinata HOM05D004391 ORTHO05D005193 3.8e-25 119.4 70 75.7
A10p30830 Brassica napus HOM05D004391 ORTHO05D005193 3.8e-25 119.4 70 75.7
C09p71330 Brassica napus HOM05D004391 ORTHO05D005193 3.8e-25 119.4 70 75.7
BolC1t05350H Brassica oleracea HOM05D004391 ORTHO05D005193 3.8e-25 119.4 70 75.7
BolC9t59895H Brassica oleracea HOM05D004391 ORTHO05D005193 3.8e-25 119.4 70 75.7
BraA10t45125Z Brassica rapa HOM05D004391 ORTHO05D005193 3.8e-25 119.4 70 75.7
FAN21G2439 Fragaria x ananassa HOM05D004391 ORTHO05D005193 3.8e-25 119.4 91 63.7
BraA01t04219Z Brassica rapa HOM05D004391 ORTHO05D005193 5.0e-25 119.0 70 75.7
Thhalv10015196m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 5.0e-25 119.0 70 77.1
Thhalv10021877m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 5.0e-25 119.0 70 75.7
Phvul.008G244100 Phaseolus vulgaris HOM05D004391 ORTHO05D005193 5.0e-25 119.0 72 76.4
Aa31LG11G6460 Aethionema arabicum HOM05D004391 ORTHO05D005193 6.5e-25 118.6 70 75.7
A05p38380 Brassica napus HOM05D004391 ORTHO05D005193 6.5e-25 118.6 70 75.7
C05p57280 Brassica napus HOM05D004391 ORTHO05D005193 6.5e-25 118.6 70 75.7
BolC5t34384H Brassica oleracea HOM05D004391 ORTHO05D005193 6.5e-25 118.6 70 75.7
BraA05t22629Z Brassica rapa HOM05D004391 ORTHO05D005193 6.5e-25 118.6 70 75.7
Sp6g37450 Schrenkiella parvula HOM05D004391 ORTHO05D005193 6.5e-25 118.6 70 75.7
Thhalv10015197m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 8.5e-25 118.2 70 74.3
QL03p059558 Quercus lobata HOM05D004391 ORTHO05D005193 1.1e-24 117.9 94 63.8
Ah.05g177740 Amaranthus hybridus HOM05D004391 ORTHO05D005193 1.4e-24 117.5 72 75.0
AT3G10860 Arabidopsis thaliana HOM05D004391 ORTHO05D005193 1.4e-24 117.5 70 75.7
Carub.0003s1010 Capsella rubella HOM05D004391 ORTHO05D005193 1.4e-24 117.5 70 75.7
Sp3g09180 Schrenkiella parvula HOM05D004391 ORTHO05D005193 1.4e-24 117.5 70 74.3
Carub.0006s0430 Capsella rubella HOM05D004391 ORTHO05D005193 1.9e-24 117.1 70 74.3
CARHR085430 Cardamine hirsuta HOM05D004391 ORTHO05D005193 1.9e-24 117.1 70 74.3
Sp6g37680 Schrenkiella parvula HOM05D004391 ORTHO05D005193 2.5e-24 116.7 70 72.9
A03p02270 Brassica napus HOM05D004391 ORTHO05D005193 3.2e-24 116.3 70 74.3
AL3G22380 Arabidopsis lyrata HOM05D004391 ORTHO05D005193 7.2e-24 115.2 70 74.3
AL6G15270 Arabidopsis lyrata HOM05D004391 ORTHO05D005193 9.3e-24 114.8 70 72.9
AT5G05370 Arabidopsis thaliana HOM05D004391 ORTHO05D005193 9.3e-24 114.8 70 72.9
Migut.D00804 Erythranthe guttata HOM05D004391 ORTHO05D005193 2.1e-23 113.6 72 75.0
AUR62013781 Chenopodium quinoa HOM05D004391 ORTHO05D005193 3.6e-23 112.8 72 72.2
LjContig00141g0006354 Lotus japonicus HOM05D004391 ORTHO05D005193 3.6e-23 112.8 72 70.8
vmacro02862 Vaccinium macrocarpon HOM05D004391 ORTHO05D005193 3.6e-23 112.8 58 89.7
Aqoxy2G00689 Aquilegia oxysepala HOM05D004391 ORTHO05D005193 6.1e-23 112.1 72 75.0
Medtr5g075690 Medicago truncatula HOM05D004391 ORTHO05D005193 6.1e-23 112.1 71 71.8
TPR.G7542 Trifolium pratense HOM05D004391 ORTHO05D005193 7.9e-23 111.7 72 70.8
Nitab4.5_0002167g0040 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.8e-22 110.5 69 75.4
Sed0004860 Sechium edule HOM05D004391 ORTHO05D005193 1.8e-22 110.5 72 69.4
AUR62023375 Chenopodium quinoa HOM05D004391 ORTHO05D005193 2.3e-22 110.2 72 70.8
Aa31LG3G4110 Aethionema arabicum HOM05D004391 ORTHO05D005193 3.9e-22 109.4 91 60.4
Potri.013G159700 Populus trichocarpa HOM05D004391 ORTHO05D005193 1.1e-21 107.8 57 89.5
FvH4_4g07960 Fragaria vesca HOM05D004391 ORTHO05D005193 1.5e-21 107.5 70 70.0
Nitab4.5_0002902g0130 Nicotiana tabacum HOM05D004391 ORTHO05D005193 2.5e-21 106.7 57 86.0
Zm00001eb281780 Zea mays HOM05D004391 ORTHO05D005193 2.5e-21 106.7 56 87.5
Lsat_1_v5_gn_5_177220 Lactuca sativa HOM05D004391 ORTHO05D005193 4.3e-21 105.9 70 64.3
PGSC0003DMG400020649 Solanum tuberosum HOM05D004391 ORTHO05D005193 5.7e-21 105.5 57 84.2
HanXRQChr05g0158631 Helianthus annuus HOM05D004391 ORTHO05D005193 7.4e-21 105.1 72 62.5
HanXRQChr10g0292911 Helianthus annuus HOM05D004391 ORTHO05D005193 9.7e-21 104.8 72 63.9
CsaV3_2G024700 Cucumis sativus L. HOM05D004391 ORTHO05D005193 1.7e-20 104.0 58 81.0
ECA236G4577 Erigeron canadensis HOM05D004391 ORTHO05D005193 1.7e-20 104.0 72 63.9
THA.LOC104823179 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 2.2e-20 103.6 56 85.7
ECA248G3374 Erigeron canadensis HOM05D004391 ORTHO05D005193 4.8e-20 102.4 72 59.7
Pp3c11_2590 Physcomitrium patens HOM05D004391 ORTHO05D005193 8.2e-20 101.7 72 59.7
Gorai.013G009600 Gossypium raimondii HOM05D004391 ORTHO05D005193 1.1e-19 101.3 56 83.9
SalBow3G4275 Salvia bowleyana HOM05D004391 ORTHO05D005193 1.4e-19 100.9 102 52.9
Pp3c7_21160 Physcomitrium patens HOM05D004391 ORTHO05D005193 2.4e-19 100.1 72 58.3
Pp3c1_1570 Physcomitrium patens HOM05D004391 ORTHO05D005193 3.1e-19 99.8 72 58.3
CBR_g1035 Chara braunii HOM05D004391 ORTHO05D005193 2.6e-18 96.7 70 60.0
SHI19278 Sapria himalayana HOM05D004391 ORTHO05D005193 5.9e-18 95.5 62 74.2
VMungo0647G0523 Vigna mungo HOM05D004391 ORTHO05D005193 7.7e-18 95.1 56 80.4
SGA_v2.0_scaffold122G33334 Striga asiatica HOM05D004391 ORTHO05D005193 1.7e-17 94.0 61 73.8
Lsat_1_v5_gn_9_13380 Lactuca sativa HOM05D000838 ORTHO05D000656 2.9e-17 93.2 57 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2485 Anthoceros agrestis HOM05D004391 ORTHO05D005193 3.8e-17 92.8 72 56.9
BcaB04g21171 Brassica carinata HOM05D004391 ORTHO05D005193 2.5e-16 90.1 54 72.2
Lsat_1_v5_gn_9_13340 Lactuca sativa HOM05D004391 ORTHO05D005193 1.8e-14 84.0 52 73.1
SGA_v2.0_scaffold129G34161 Striga asiatica HOM05D004391 ORTHO05D005193 1.8e-14 84.0 53 77.4
Lsat_1_v5_gn_8_98921 Lactuca sativa HOM05D004391 ORTHO05D005193 3.0e-14 83.2 56 69.6
SEGI_31881 Sequoiadendron giganteum HOM05D004391 ORTHO05D005193 6.7e-14 82.0 53 64.2
Mapoly0022s0089 Marchantia polymorpha HOM05D004391 ORTHO05D005193 8.8e-14 81.6 66 51.5
Lsat_1_v5_gn_8_98901 Lactuca sativa HOM05D004391 ORTHO05D005193 2.0e-13 80.5 52 71.2
Pp3c13_7360 Physcomitrium patens HOM05D004391 ORTHO05D005193 2.6e-13 80.1 72 48.6
BolC2t06197H Brassica oleracea HOM05D004391 ORTHO05D005193 3.3e-13 79.7 66 60.6
C02p02320 Brassica napus HOM05D004391 ORTHO05D005193 4.8e-12 75.9 69 58.0
BcaB05g21720 Brassica carinata HOM05D004391 ORTHO05D005193 1.4e-11 74.3 73 52.1
DCAR_018583 Daucus carota HOM05D004391 ORTHO05D005193 4.1e-11 72.8 70 45.7
Oeu007160.1 Olea europaea HOM05D004391 ORTHO05D005193 7.7e-10 68.6 55 65.5
Mapoly0036s0032 Marchantia polymorpha HOM05D004391 ORTHO05D005193 1.3e-09 67.8 70 44.3
DCAR_023068 Daucus carota HOM05D004391 ORTHO05D005193 2.9e-09 66.6 73 47.9
EL10Ac1g00726 Beta vulgaris HOM05D004391 ORTHO05D005193 6.5e-09 65.5 38 76.3
SMO117G0077 Selaginella moellendorffii HOM05D004391 ORTHO05D005193 6.1e-07 58.9 69 42.0
MCO15G410 Micromonas commoda HOM05D004391 ORTHO05D005193 8.0e-07 58.5 73 41.1
PRCOL_00006067 Prasinoderma coloniale HOM05D004391 ORTHO05D005193 1.8e-06 57.4 72 37.5


User provided reference genes

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