Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.0e-179 633.3 314 100.0
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 2.9e-134 482.3 331 71.3
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 2.6e-130 469.2 309 73.5
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 4.8e-129 464.9 314 72.6
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 1.5e-127 459.9 312 70.5
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 1.0e-126 457.2 309 71.8
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 1.1e-125 453.8 333 66.4
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.8e-123 446.4 305 68.9
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 2.3e-123 446.0 314 68.5
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 1.5e-122 443.4 312 70.8
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 2.0e-122 443.0 313 67.4
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.3e-121 440.3 314 68.8
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.3e-121 440.3 314 68.8
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.2e-119 433.7 309 68.0
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 4.5e-119 431.8 309 64.1
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 1.0e-118 430.6 310 64.2
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 1.3e-118 430.3 314 67.8
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 1.7e-118 429.9 310 64.2
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.9e-118 429.1 313 62.3
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 8.5e-118 427.6 310 64.8
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.1e-117 427.2 312 65.7
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 1.5e-117 426.8 313 64.5
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 3.2e-117 425.6 309 64.1
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 3.2e-117 425.6 312 65.7
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 4.2e-117 425.2 315 63.8
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 4.2e-117 425.2 309 65.0
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 5.5e-117 424.9 314 63.4
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 7.2e-117 424.5 312 64.1
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 7.2e-117 424.5 308 65.9
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 7.2e-117 424.5 311 68.2
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 9.4e-117 424.1 312 65.4
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.2e-116 423.7 313 61.0
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.6e-116 423.3 314 64.6
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 1.6e-116 423.3 309 64.4
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 4.7e-116 421.8 311 66.9
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 1.0e-115 420.6 308 65.3
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 1.0e-115 420.6 309 67.6
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 3.0e-115 419.1 309 64.7
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 3.0e-115 419.1 314 63.4
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 1.7e-113 413.3 309 64.7
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 2.2e-113 412.9 307 62.5
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 2.8e-113 412.5 309 63.1
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 3.7e-113 412.1 314 64.6
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 2.4e-112 409.5 309 63.8
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 2.4e-112 409.5 309 63.4
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 9.1e-112 407.5 309 64.1
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 2.0e-111 406.4 311 62.1
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 2.0e-111 406.4 312 59.0
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 4.5e-111 405.2 311 63.3
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 8.5e-110 401.0 309 60.8
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 5.5e-109 398.3 316 61.1
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.7e-108 396.0 309 63.4
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 3.6e-108 395.6 309 63.4
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.7e-108 395.2 309 62.5
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.2e-106 390.6 288 72.6
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 4.4e-106 388.7 285 67.4
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 1.3e-105 387.1 307 60.3
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 1.8e-104 383.3 315 60.0
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.2e-103 380.6 318 60.4
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 1.0e-102 377.5 299 63.2
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 1.3e-102 377.1 305 60.0
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-102 376.7 293 60.8
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 2.3e-102 376.3 295 60.7
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 6.6e-102 374.8 268 69.0
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 8.6e-102 374.4 307 61.2
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 2.5e-101 372.9 312 59.6
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 4.3e-101 372.1 307 60.3
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 5.6e-101 371.7 310 59.0
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 8.0e-100 367.9 274 66.8
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.8e-99 366.7 314 58.3
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.3e-99 366.3 311 58.5
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 2.3e-99 366.3 310 59.4
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.3e-99 366.3 311 58.5
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 3.0e-99 365.9 309 58.9
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 4.0e-99 365.5 309 59.5
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 8.9e-99 364.4 314 58.0
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 1.5e-98 363.6 311 57.6
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 2.6e-98 362.8 314 57.0
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.3e-97 360.5 307 59.9
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 8.3e-97 357.8 310 56.8
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 1.0e-94 350.9 277 67.5
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 1.3e-94 350.5 309 57.6
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 2.3e-94 349.7 231 71.9
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 6.6e-94 348.2 322 57.1
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 1.4e-91 340.5 316 56.0
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 5.8e-90 335.1 259 61.0
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.8e-90 335.1 273 61.5
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 1.4e-88 330.5 267 62.5
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 1.5e-85 320.5 310 54.5
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 2.5e-85 319.7 244 66.0
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 2.0e-82 310.1 224 65.6
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 4.4e-82 308.9 244 59.8
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 4.6e-79 298.9 257 56.0
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.1e-77 294.3 221 63.3
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 8.9e-75 284.6 271 54.2
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 2.3e-70 270.0 209 60.8
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 4.3e-69 265.8 311 47.9
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 4.7e-68 262.3 312 49.4
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 5.8e-66 255.4 312 44.9
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 9.9e-66 254.6 223 58.3
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 6.2e-60 235.3 306 42.2
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.5e-58 230.7 325 40.3
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 5.8e-58 228.8 210 55.7
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.3e-54 216.9 154 64.9
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 3.0e-54 216.5 232 47.4
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 2.5e-53 213.4 303 40.3
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 7.6e-50 201.8 198 54.0
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.4e-48 197.6 210 49.0
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 2.7e-47 193.4 169 58.6
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 1.9e-45 187.2 256 46.1
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 3.7e-44 183.0 159 54.7
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.4e-43 180.3 155 58.1
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 2.1e-39 167.2 322 33.5
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 2.7e-39 166.8 105 75.2
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 2.3e-38 163.7 201 44.8
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 2.1e-36 157.1 161 55.3
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.9e-30 136.3 180 43.9
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.5e-29 133.7 167 44.3
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 4.1e-27 126.3 89 65.2
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 3.4e-26 123.2 75 69.3
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.6e-23 114.4 196 38.8
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 3.6e-23 113.2 147 42.2
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.4e-22 111.3 142 43.7
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 4.3e-21 106.3 118 48.3
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 4.3e-21 106.3 81 60.5
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.3e-20 104.8 81 59.3
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 1.6e-15 87.8 73 53.4
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 3.0e-14 83.6 106 47.2
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 5.7e-13 79.3 144 37.5
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 1.5e-08 64.7 37 81.1
ATR0081G033 Amborella trichopoda HOM05D005679 ORTHO05D007228 8.8e-06 55.5 77 40.3


User provided reference genes

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