Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.4e-142 508.8 261 100.0
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.5e-46 190.7 315 42.5
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 2.9e-26 123.2 259 38.2
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.9e-26 123.2 254 36.2
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 2.0e-24 117.1 278 34.5
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 7.8e-24 115.2 126 49.2
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 4.3e-22 109.4 261 31.8
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 4.7e-21 105.9 156 39.7
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 6.2e-21 105.5 293 30.4
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-20 104.8 136 44.1
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 5.2e-20 102.4 234 33.8
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 9.8e-19 98.2 263 31.9
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 1.3e-18 97.8 138 39.9
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 3.7e-18 96.3 141 40.4
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 6.4e-18 95.5 220 35.5
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.9e-17 94.0 236 32.6
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 7.1e-17 92.0 270 30.0
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 2.1e-16 90.5 273 29.3
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 2.3e-15 87.0 350 27.4
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.2e-13 81.3 132 37.1
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.2e-13 81.3 132 37.1
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.6e-13 80.9 128 39.8
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 2.1e-13 80.5 127 35.4
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.1e-12 78.2 155 33.5
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 1.8e-12 77.4 106 40.6
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 1.2e-11 74.7 138 35.5
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 1.7e-10 70.9 228 26.8
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 8.4e-10 68.6 243 27.6
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 8.4e-10 68.6 153 32.0
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.1e-09 68.2 132 32.6
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 3.2e-09 66.6 97 38.1
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 5.4e-09 65.9 150 32.7
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 9.2e-09 65.1 122 37.7
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.6e-08 64.3 197 28.9
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 1.6e-08 64.3 232 28.9
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.1e-08 63.9 211 28.9
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 3.5e-08 63.2 213 30.5
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.6e-08 62.8 207 28.5
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.6e-08 62.8 207 28.5
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 6.0e-08 62.4 213 30.5
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.0e-07 61.6 142 35.9
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.0e-07 61.6 148 31.1
Hund20652 Selenicereus undatus HOM05D008144 ORTHO05D010081 1.3e-07 61.2 128 36.7
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 2.3e-07 60.5 187 32.1
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 5.1e-07 59.3 82 42.7
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 1.5e-06 57.8 207 23.7
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 7.3e-06 55.5 138 32.6


User provided reference genes

Program Settings