Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0561 Trochodendron aralioides HOM05D004934 ORTHO05D005924 2.1e-53 212.2 115 100.0
Nn2g14177 Nelumbo nucifera HOM05D004934 ORTHO05D005924 3.6e-42 174.9 116 82.8
Aqoxy4G02760 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 6.2e-42 174.1 116 81.0
Dinv22836 Davidia involucrata HOM05D004934 ORTHO05D005924 1.4e-38 162.9 116 79.3
PGR102G3359 Punica granatum HOM05D004934 ORTHO05D005924 2.4e-38 162.2 119 75.6
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 3.2e-38 161.8 116 73.3
Actinidia35468 Actinidia chinensis HOM05D004934 ORTHO05D005924 9.3e-38 160.2 117 76.1
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 6.0e-37 157.5 117 74.4
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 1.0e-36 156.8 116 75.9
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 1.3e-36 156.4 114 76.3
RcHm_v2.0_Chr5g0045641 Rosa chinensis HOM05D004934 ORTHO05D005924 3.0e-36 155.2 115 73.9
Cfa010007 Carpinus fangiana HOM05D004934 ORTHO05D005924 6.7e-36 154.1 120 73.3
ATR0609G030 Amborella trichopoda HOM05D004934 ORTHO05D005924 4.3e-35 151.4 118 72.0
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 4.3e-35 151.4 118 74.6
Manes.04G003100 Manihot esculenta HOM05D004934 ORTHO05D005924 5.6e-35 151.0 121 71.1
Nitab4.5_0012586g0010 Nicotiana tabacum HOM05D004934 ORTHO05D005924 5.6e-35 151.0 117 71.8
Prupe.6G131900 Prunus persica HOM05D004934 ORTHO05D005924 9.6e-35 150.2 118 72.9
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 9.6e-35 150.2 116 69.0
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 1.6e-34 149.4 121 72.7
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 2.1e-34 149.1 120 71.7
Nitab4.5_0000755g0070 Nicotiana tabacum HOM05D004934 ORTHO05D005924 2.8e-34 148.7 118 72.0
Duzib168G1921 Durio zibethinus HOM05D004934 ORTHO05D005924 6.2e-34 147.5 120 70.0
FvH4_5g26820 Fragaria vesca HOM05D004934 ORTHO05D005924 6.2e-34 147.5 120 70.0
FAN04G2654 Fragaria x ananassa HOM05D004934 ORTHO05D005924 6.2e-34 147.5 120 70.0
FAN13G2036 Fragaria x ananassa HOM05D004934 ORTHO05D005924 6.2e-34 147.5 120 70.0
TAR636G0935 Trochodendron aralioides HOM05D004934 ORTHO05D005924 6.2e-34 147.5 114 76.3
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 8.1e-34 147.1 118 72.0
Eucgr.B03844 Eucalyptus grandis HOM05D004934 ORTHO05D005924 8.1e-34 147.1 117 72.6
Peaxi162Scf00040g00023 Petunia axillaris HOM05D004934 ORTHO05D005924 1.8e-33 146.0 116 69.8
MD11G1166100 Malus domestica HOM05D004934 ORTHO05D005924 3.1e-33 145.2 114 72.8
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 4.0e-33 144.8 115 67.0
Cc01_g09040 Coffea canephora HOM05D004934 ORTHO05D005924 5.3e-33 144.4 117 72.6
Nitab4.5_0002914g0100 Nicotiana tabacum HOM05D004934 ORTHO05D005924 5.3e-33 144.4 117 70.9
Ciclev10029605m.g Citrus clementina HOM05D004934 ORTHO05D005924 9.0e-33 143.7 117 72.6
PGSC0003DMG400026356 Solanum tuberosum HOM05D004934 ORTHO05D005924 9.0e-33 143.7 116 73.3
TWI31G0143 Tripterygium wilfordii HOM05D004934 ORTHO05D005924 9.0e-33 143.7 121 66.1
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 2.0e-32 142.5 116 71.6
CSS0038235 Camellia sinensis var. sinensis HOM05D004934 ORTHO05D005924 3.4e-32 141.7 102 78.4
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 3.4e-32 141.7 121 67.8
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 3.4e-32 141.7 121 67.8
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 3.4e-32 141.7 121 69.4
RcHm_v2.0_Chr5g0046361 Rosa chinensis HOM05D004934 ORTHO05D005924 5.8e-32 141.0 123 66.7
Sc06g0008770 Simmondsia chinensis HOM05D004934 ORTHO05D005924 5.8e-32 141.0 118 66.9
QL01p012137 Quercus lobata HOM05D004934 ORTHO05D005924 7.6e-32 140.6 119 69.7
Solyc11g068510.2 Solanum lycopersicum HOM05D004934 ORTHO05D005924 1.3e-31 139.8 115 68.7
Sopen11g027220 Solanum pennellii HOM05D004934 ORTHO05D005924 1.3e-31 139.8 115 68.7
Sed0020870 Sechium edule HOM05D004934 ORTHO05D005924 1.7e-31 139.4 120 70.8
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 2.2e-31 139.0 117 68.4
ClCG01G011970 Citrullus lanatus HOM05D004934 ORTHO05D005924 2.2e-31 139.0 114 71.9
VMungo1127G1656 Vigna mungo HOM05D004934 ORTHO05D005924 2.9e-31 138.7 121 71.9
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 4.9e-31 137.9 121 71.1
CsaV3_1G014900 Cucumis sativus L. HOM05D004934 ORTHO05D005924 8.4e-31 137.1 117 70.9
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 8.4e-31 137.1 121 71.9
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 1.9e-30 136.0 121 66.9
Gohir.A08G005600 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.9e-30 136.0 121 66.1
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 3.2e-30 135.2 121 69.4
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 4.2e-30 134.8 114 69.3
MSTRG.12371 Avicennia marina HOM05D004934 ORTHO05D005924 5.5e-30 134.4 118 69.5
Nitab4.5_0000227g0280 Nicotiana tabacum HOM05D004934 ORTHO05D005924 5.5e-30 134.4 117 69.2
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 5.5e-30 134.4 120 62.5
CAN.G1524.5 Capsicum annuum HOM05D004934 ORTHO05D005924 9.3e-30 133.7 118 66.1
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 1.2e-29 133.3 118 66.1
Aqoxy2G01124 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 1.6e-29 132.9 104 74.0
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 1.6e-29 132.9 121 67.8
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 1.6e-29 132.9 121 67.8
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 1.6e-29 132.9 121 68.6
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 1.6e-29 132.9 117 65.0
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 2.1e-29 132.5 113 66.4
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 3.5e-29 131.7 121 64.5
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 4.6e-29 131.3 117 64.1
Atru.chr3.3218 Acer truncatum HOM05D004934 ORTHO05D005924 6.0e-29 131.0 121 66.1
Oeu031471.1 Olea europaea HOM05D004934 ORTHO05D005924 6.0e-29 131.0 118 62.7
Lj3g0027260 Lotus japonicus HOM05D004934 ORTHO05D005924 1.8e-28 129.4 118 66.9
Duzib170G0221 Durio zibethinus HOM05D004934 ORTHO05D005924 2.3e-28 129.0 120 65.0
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 3.0e-28 128.6 117 62.4
Sabra04G0136300 Salix brachista HOM05D004934 ORTHO05D005924 1.1e-27 126.7 125 63.2
Zm00001eb369670 Zea mays HOM05D004934 ORTHO05D005924 1.9e-27 125.9 120 62.5
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 3.3e-27 125.2 113 66.4
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 7.4e-27 124.0 129 61.2
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 7.4e-27 124.0 113 65.5
Rhsim13G0112500 Rhododendron simsii HOM05D004934 ORTHO05D005924 1.4e-25 119.8 153 53.6
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 2.4e-25 119.0 121 61.2
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 4.1e-25 118.2 114 63.2
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 5.3e-25 117.9 116 59.5
Zm00001eb151060 Zea mays HOM05D004934 ORTHO05D005924 5.3e-25 117.9 119 59.7
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 3.4e-24 115.2 111 60.4
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 4.5e-24 114.8 111 59.5
Potri.004G201700 Populus trichocarpa HOM05D004934 ORTHO05D005924 7.6e-24 114.0 125 59.2
HanXRQChr11g0324151 Helianthus annuus HOM05D004934 ORTHO05D005924 1.3e-23 113.2 123 56.1
AL4G22570 Arabidopsis lyrata HOM05D004934 ORTHO05D005924 1.7e-23 112.8 115 58.3
Lsat_1_v5_gn_2_59421 Lactuca sativa HOM05D004934 ORTHO05D005924 1.7e-23 112.8 119 58.8
Carub.0004s0847 Capsella rubella HOM05D004934 ORTHO05D005924 6.5e-23 110.9 117 58.1
SGA_v2.0_scaffold295G47520 Striga asiatica HOM05D004934 ORTHO05D005924 1.1e-22 110.2 119 57.1
MBI05_g05303_MAGBIO Magnolia biondii HOM05D004934 ORTHO05D005924 1.4e-22 109.8 84 71.4
AT2G27730 Arabidopsis thaliana HOM05D004934 ORTHO05D005924 5.5e-22 107.8 115 55.7
Peaxi162Scf00757g00422 Petunia axillaris HOM05D004934 ORTHO05D005924 7.2e-22 107.5 114 57.0
BcaC02g08235 Brassica carinata HOM05D004934 ORTHO05D005924 2.1e-21 105.9 118 54.2
C04p56900 Brassica napus HOM05D004934 ORTHO05D005924 2.1e-21 105.9 118 54.2
BolC4t27225H Brassica oleracea HOM05D004934 ORTHO05D005924 2.1e-21 105.9 118 54.2
BcaB06g28164 Brassica carinata HOM05D004934 ORTHO05D005924 3.5e-21 105.1 119 55.5
FAN11G2484 Fragaria x ananassa HOM05D004934 ORTHO05D005924 3.5e-21 105.1 120 54.2
A07p18350 Brassica napus HOM05D004934 ORTHO05D005924 6.1e-21 104.4 118 55.9
FvH4_3g25100 Fragaria vesca HOM05D004934 ORTHO05D005924 6.1e-21 104.4 120 54.2
A04p21090 Brassica napus HOM05D004934 ORTHO05D005924 7.9e-21 104.0 114 54.4
BraA04t17678Z Brassica rapa HOM05D004934 ORTHO05D005924 7.9e-21 104.0 114 54.4
Sp4g10520 Schrenkiella parvula HOM05D004934 ORTHO05D005924 7.9e-21 104.0 118 53.4
Aa31LG5G8260 Aethionema arabicum HOM05D004934 ORTHO05D005924 1.8e-20 102.8 119 52.1
BraA07t29551Z Brassica rapa HOM05D004934 ORTHO05D005924 1.8e-20 102.8 116 53.4
Oeu035567.1 Olea europaea HOM05D004934 ORTHO05D005924 1.8e-20 102.8 118 53.4
SalBow3G2207 Salvia bowleyana HOM05D004934 ORTHO05D005924 1.8e-20 102.8 123 56.1
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 3.9e-20 101.7 113 55.8
CARHR120400 Cardamine hirsuta HOM05D004934 ORTHO05D005924 8.7e-20 100.5 115 52.2
SGA_v2.0_scaffold177G39414 Striga asiatica HOM05D004934 ORTHO05D005924 8.7e-20 100.5 119 55.5
BcaC02g10898 Brassica carinata HOM05D004934 ORTHO05D005924 1.5e-19 99.8 117 53.8
C04p23930 Brassica napus HOM05D004934 ORTHO05D005924 1.5e-19 99.8 117 53.8
BolC4t23886H Brassica oleracea HOM05D004934 ORTHO05D005924 1.5e-19 99.8 117 53.8
Thhalv10017451m.g Eutrema salsugineum HOM05D004934 ORTHO05D005924 1.9e-19 99.4 115 52.2
FAN25G2937 Fragaria x ananassa HOM05D004934 ORTHO05D005924 2.5e-19 99.0 81 66.7
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 3.3e-19 98.6 111 59.5
BcaB02g10110 Brassica carinata HOM05D004934 ORTHO05D005924 9.7e-19 97.1 118 50.8
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 9.7e-19 97.1 111 58.6
DCAR_010342 Daucus carota HOM05D004934 ORTHO05D005924 1.3e-18 96.7 86 65.1
CDE04G1608 Ceratophyllum demersum HOM05D004934 ORTHO05D005924 1.6e-18 96.3 123 52.8
vmacro03322 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 3.7e-18 95.1 195 41.0
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.4e-17 93.2 69 68.1
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.4e-17 93.2 69 68.1
Os08g0559000 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 4.1e-17 91.7 114 52.6
DCAR_030570 Daucus carota HOM05D004934 ORTHO05D005924 6.9e-17 90.9 69 81.2
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 2.0e-16 89.4 70 64.3
Pp3c1_22500 Physcomitrium patens HOM05D004934 ORTHO05D005924 3.4e-16 88.6 113 48.7
Zm00001eb416000 Zea mays HOM05D004934 ORTHO05D005924 4.5e-16 88.2 100 55.0
Zm00001eb343400 Zea mays HOM05D004934 ORTHO05D005924 5.9e-16 87.8 100 54.0
ECA238G4733 Erigeron canadensis HOM05D004934 ORTHO05D005924 7.7e-16 87.4 120 50.0
Cpa.g.sc32.36 Carica papaya HOM05D004934 ORTHO05D005924 3.8e-15 85.1 71 66.2
Gorai.009G084700 Gossypium raimondii HOM05D004934 ORTHO05D005924 3.2e-14 82.0 79 64.6
BcaC02g10901 Brassica carinata HOM05D004934 ORTHO05D005924 4.2e-14 81.6 105 49.5
Gohir.D05G082900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.2e-13 80.1 79 63.3
Os09g0568900 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 2.7e-13 79.0 85 56.5
HPP92_003219 Vanilla planifolia HOM05D004934 ORTHO05D005924 2.7e-13 79.0 81 58.0
MELO3C004698.2 Cucumis melo HOM05D004934 ORTHO05D005924 3.6e-13 78.6 101 51.5
FAN21G3762 Fragaria x ananassa HOM05D004934 ORTHO05D005924 3.6e-13 78.6 79 59.5
Gohir.A05G080000 Gossypium hirsutum HOM05D004934 ORTHO05D005924 7.9e-13 77.4 79 62.0
Nn6g34871 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.7e-10 69.7 57 70.2
Pp3c14_2790 Physcomitrium patens HOM05D004934 ORTHO05D005924 2.8e-10 68.9 115 46.1
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis HOM05D004934 ORTHO05D005924 3.4e-08 62.0 123 39.0
Cpa.g.sc32.38 Carica papaya HOM05D004934 ORTHO05D005924 5.0e-07 58.2 34 88.2
ECA238G3836 Erigeron canadensis HOM05D000407 ORTHO05D001717 8.5e-07 57.4 40 65.0
SEGI_07969 Sequoiadendron giganteum HOM05D004934 ORTHO05D005924 7.2e-06 54.3 36 77.8


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