Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0553 Trochodendron aralioides HOM05D005807 ORTHO05D007121 4.3e-101 371.3 186 100.0
Glyma.18G063100 Glycine max HOM05D005807 ORTHO05D007121 4.5e-42 175.3 123 71.5
Hma1.2p1_0703F.1_g206510 Hydrangea macrophylla HOM05D005807 ORTHO05D007121 4.5e-42 175.3 93 87.1
vmacro10049 Vaccinium macrocarpon HOM05D005807 ORTHO05D007121 5.9e-42 174.9 93 88.2
Nn2g13704 Nelumbo nucifera HOM05D005807 ORTHO05D007121 1.3e-41 173.7 93 87.1
TAR636G1782 Trochodendron aralioides HOM05D005807 ORTHO05D007121 1.3e-41 173.7 116 75.0
HanXRQChr08g0221811 Helianthus annuus HOM05D005807 ORTHO05D007121 1.7e-41 173.3 93 87.1
PGR102G0477 Punica granatum HOM05D005807 ORTHO05D007121 1.7e-41 173.3 91 86.8
Actinidia29698 Actinidia chinensis HOM05D005807 ORTHO05D007121 2.2e-41 172.9 93 87.1
Glyma.11G175500 Glycine max HOM05D005807 ORTHO05D007121 2.2e-41 172.9 123 70.7
TWI31G0235 Tripterygium wilfordii HOM05D005807 ORTHO05D007121 2.2e-41 172.9 89 89.9
Gohir.A13G224500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 3.8e-41 172.2 93 86.0
Gorai.013G260200 Gossypium raimondii HOM05D005807 ORTHO05D007121 3.8e-41 172.2 93 86.0
MBI14_g11284_MAGBIO Magnolia biondii HOM05D005807 ORTHO05D007121 3.8e-41 172.2 93 86.0
Phvul.006G068000 Phaseolus vulgaris HOM05D005807 ORTHO05D007121 3.8e-41 172.2 123 69.9
Actinidia13933 Actinidia chinensis HOM05D005807 ORTHO05D007121 5.0e-41 171.8 93 86.0
Lsat_1_v5_gn_2_122940 Lactuca sativa HOM05D005807 ORTHO05D007121 5.0e-41 171.8 93 87.1
arahy.Tifrunner.gnm1.ann1.8F6K17 Arachis hypogaea HOM05D005807 ORTHO05D007121 6.5e-41 171.4 93 86.0
arahy.Tifrunner.gnm1.ann1.B02C3Y Arachis hypogaea HOM05D005807 ORTHO05D007121 6.5e-41 171.4 93 86.0
CiPaw.14G059700 Carya illinoinensis HOM05D005807 ORTHO05D007121 6.5e-41 171.4 119 70.6
HanXRQChr07g0202931 Helianthus annuus HOM05D005807 ORTHO05D007121 1.1e-40 170.6 93 86.0
Sed0012142 Sechium edule HOM05D005807 ORTHO05D007121 1.1e-40 170.6 123 68.3
CSS0007250 Camellia sinensis var. sinensis HOM05D005807 ORTHO05D007121 1.5e-40 170.2 123 68.3
Lj6g0006671 Lotus japonicus HOM05D005807 ORTHO05D007121 1.5e-40 170.2 93 83.9
VMungo0540G1230 Vigna mungo HOM05D005807 ORTHO05D007121 1.5e-40 170.2 123 69.9
Duzib150G0199 Durio zibethinus HOM05D005807 ORTHO05D007121 1.9e-40 169.9 93 86.0
FAN16G0682 Fragaria x ananassa HOM05D005807 ORTHO05D007121 1.9e-40 169.9 95 82.1
THA.LOC104814913 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 1.9e-40 169.9 112 73.2
Gohir.D13G229500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 2.5e-40 169.5 93 84.9
Lj5g0019578 Lotus japonicus HOM05D005807 ORTHO05D007121 2.5e-40 169.5 123 68.3
Lalb_Chr18g0050921 Lupinus albus HOM05D005807 ORTHO05D007121 2.5e-40 169.5 123 68.3
THA.LOC104810714 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 2.5e-40 169.5 116 72.4
Duzib168G1045 Durio zibethinus HOM05D005807 ORTHO05D007121 3.2e-40 169.1 93 84.9
Oeu025375.1 Olea europaea HOM05D005807 ORTHO05D007121 3.2e-40 169.1 93 83.9
Sc12g0000690 Simmondsia chinensis HOM05D005807 ORTHO05D007121 3.2e-40 169.1 89 86.5
CAN.G394.126 Capsicum annuum HOM05D005807 ORTHO05D007121 4.2e-40 168.7 93 82.8
Solyc06g076940.3 Solanum lycopersicum HOM05D005807 ORTHO05D007121 4.2e-40 168.7 93 82.8
Sopen06g033340 Solanum pennellii HOM05D005807 ORTHO05D007121 4.2e-40 168.7 93 82.8
THA.LOC104811269 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 4.2e-40 168.7 93 84.9
GSVIVG01038735001 Vitis vinifera HOM05D005807 ORTHO05D007121 4.2e-40 168.7 93 82.8
Ah.15g099940 Amaranthus hybridus HOM05D005807 ORTHO05D007121 5.5e-40 168.3 89 85.4
Migut.N02895 Erythranthe guttata HOM05D005807 ORTHO05D007121 5.5e-40 168.3 123 68.3
FAN21G1466 Fragaria x ananassa HOM05D005807 ORTHO05D007121 5.5e-40 168.3 93 82.8
RcHm_v2.0_Chr5g0069441 Rosa chinensis HOM05D005807 ORTHO05D007121 5.5e-40 168.3 93 82.8
SGA_v2.0_scaffold92G28310 Striga asiatica HOM05D005807 ORTHO05D007121 5.5e-40 168.3 92 84.8
TWI36G1710 Tripterygium wilfordii HOM05D005807 ORTHO05D007121 5.5e-40 168.3 93 86.0
ClCG03G000770 Citrullus lanatus HOM05D005807 ORTHO05D007121 7.2e-40 167.9 89 86.5
Cc05_g09980 Coffea canephora HOM05D005807 ORTHO05D007121 7.2e-40 167.9 93 82.8
MELO3C020551.2 Cucumis melo HOM05D005807 ORTHO05D007121 7.2e-40 167.9 89 86.5
Prupe.6G057600 Prunus persica HOM05D005807 ORTHO05D007121 7.2e-40 167.9 93 82.8
PGSC0003DMG400030355 Solanum tuberosum HOM05D005807 ORTHO05D007121 7.2e-40 167.9 93 82.8
AT5G58740 Arabidopsis thaliana HOM05D005807 ORTHO05D007121 9.4e-40 167.5 123 67.5
Thecc.09G301900 Theobroma cacao HOM05D005807 ORTHO05D007121 9.4e-40 167.5 93 83.9
AL8G35020 Arabidopsis lyrata HOM05D005807 ORTHO05D007121 1.2e-39 167.2 93 81.7
Carub.0008s1936 Capsella rubella HOM05D005807 ORTHO05D007121 1.2e-39 167.2 93 81.7
Thhalv10014898m.g Eutrema salsugineum HOM05D005807 ORTHO05D007121 1.2e-39 167.2 93 81.7
Sp6g20430 Schrenkiella parvula HOM05D005807 ORTHO05D007121 1.2e-39 167.2 93 81.7
Aqoxy168s004 Aquilegia oxysepala HOM05D005807 ORTHO05D007121 1.6e-39 166.8 89 86.5
Aqoxy2G00908 Aquilegia oxysepala HOM05D005807 ORTHO05D007121 1.6e-39 166.8 89 86.5
CsaV3_1G036170 Cucumis sativus L. HOM05D005807 ORTHO05D007121 1.6e-39 166.8 119 69.7
PSO339G6415 Papaver somniferum HOM05D005807 ORTHO05D007121 2.1e-39 166.4 93 82.8
PSO801G0778 Papaver somniferum HOM05D005807 ORTHO05D007121 2.1e-39 166.4 93 82.8
Psat5g159160 Pisum sativum HOM05D005807 ORTHO05D007121 2.1e-39 166.4 112 73.2
Sabra16G0152900 Salix brachista HOM05D005807 ORTHO05D007121 2.1e-39 166.4 89 85.4
Atru.chr3.4221 Acer truncatum HOM05D005807 ORTHO05D007121 2.7e-39 166.0 123 66.7
EL10Ac7g16166 Beta vulgaris HOM05D005807 ORTHO05D007121 2.7e-39 166.0 119 68.9
Eucgr.B02255 Eucalyptus grandis HOM05D005807 ORTHO05D007121 2.7e-39 166.0 93 82.8
MD11G1074800 Malus domestica HOM05D005807 ORTHO05D007121 2.7e-39 166.0 93 81.7
Manes.02G119500 Manihot esculenta HOM05D005807 ORTHO05D007121 2.7e-39 166.0 89 84.3
CANSAT25G1325 Cannabis sativa HOM05D005807 ORTHO05D007121 3.6e-39 165.6 119 68.1
CDE06G1535 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 3.6e-39 165.6 93 82.8
CDE06G1924 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 3.6e-39 165.6 93 82.8
Potri.001G251204 Populus trichocarpa HOM05D005807 ORTHO05D007121 3.6e-39 165.6 89 84.3
MSTRG.22154 Avicennia marina HOM05D005807 ORTHO05D007121 4.7e-39 165.2 119 67.2
BcaB01g04495 Brassica carinata HOM05D005807 ORTHO05D007121 4.7e-39 165.2 123 65.9
Sed0002691 Sechium edule HOM05D005807 ORTHO05D007121 4.7e-39 165.2 119 68.9
Aa31LG11G500 Aethionema arabicum HOM05D005807 ORTHO05D007121 6.1e-39 164.9 93 80.6
A10p15530 Brassica napus HOM05D005807 ORTHO05D007121 6.1e-39 164.9 93 80.6
BolC9t57942H Brassica oleracea HOM05D005807 ORTHO05D007121 6.1e-39 164.9 93 80.6
BraA10t43680Z Brassica rapa HOM05D005807 ORTHO05D007121 6.1e-39 164.9 93 80.6
Ciclev10029472m.g Citrus clementina HOM05D005807 ORTHO05D007121 8.0e-39 164.5 123 65.9
Nitab4.5_0000010g0300 Nicotiana tabacum HOM05D005807 ORTHO05D007121 8.0e-39 164.5 93 81.7
Nitab4.5_0008156g0020 Nicotiana tabacum HOM05D005807 ORTHO05D007121 8.0e-39 164.5 93 81.7
SalBow7G1665 Salvia bowleyana HOM05D005807 ORTHO05D007121 8.0e-39 164.5 93 81.7
FvH4_3g38540 Fragaria vesca HOM05D005807 ORTHO05D007121 1.0e-38 164.1 93 81.7
FAN11G3045 Fragaria x ananassa HOM05D005807 ORTHO05D007121 1.0e-38 164.1 93 81.7
MD03G1070800 Malus domestica HOM05D005807 ORTHO05D007121 1.0e-38 164.1 93 80.6
DCAR_013059 Daucus carota HOM05D000043 ORTHO05D000223 1.4e-38 163.7 93 82.8
CARHR272650 Cardamine hirsuta HOM05D005807 ORTHO05D007121 1.8e-38 163.3 93 80.6
Cpa.g.sc62.98 Carica papaya HOM05D005807 ORTHO05D007121 1.8e-38 163.3 89 83.1
CiPaw.13G077700 Carya illinoinensis HOM05D005807 ORTHO05D007121 1.8e-38 163.3 88 85.2
unitig_8.g3606 Utricularia gibba HOM05D000298 ORTHO05D001646 2.3e-38 162.9 93 82.8
HPP92_000412 Vanilla planifolia HOM05D005807 ORTHO05D007121 6.7e-38 161.4 93 80.6
BcaC04g19835 Brassica carinata HOM05D005807 ORTHO05D007121 8.8e-38 161.0 93 79.6
C09p50820 Brassica napus HOM05D005807 ORTHO05D007121 8.8e-38 161.0 93 79.6
SEGI_25973 Sequoiadendron giganteum HOM05D005807 ORTHO05D007121 1.2e-37 160.6 89 80.9
Os01g0668000 Oryza sativa ssp. japonica HOM05D005807 ORTHO05D007121 2.0e-37 159.8 93 80.6
Zm00001eb110600 Zea mays HOM05D005807 ORTHO05D007121 2.0e-37 159.8 93 81.7
Sabra09G0033100 Salix brachista HOM05D005807 ORTHO05D007121 2.6e-37 159.5 89 82.0
Hma1.2p1_0703F.1_g206500 Hydrangea macrophylla HOM05D005807 ORTHO05D007121 7.5e-37 157.9 127 63.8
QL01p038261 Quercus lobata HOM05D005807 ORTHO05D007121 1.7e-36 156.8 148 56.1
COL.COLO4_19156 Corchorus olitorius HOM05D005807 ORTHO05D007121 2.8e-36 156.0 98 76.5
Manes.01G161700 Manihot esculenta HOM05D005807 ORTHO05D007121 3.1e-35 152.5 88 80.7
Gohir.D09G090500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 9.1e-35 151.0 82 84.1
SMO116G0032 Selaginella moellendorffii HOM05D005807 ORTHO05D007121 3.2e-32 142.5 89 70.8
Ca_14930_v3 Cicer arietinum L. HOM05D005807 ORTHO05D007121 4.2e-32 142.1 77 87.0
Mapoly0037s0041 Marchantia polymorpha HOM05D005807 ORTHO05D007121 6.8e-30 134.8 106 60.4
Pp3c16_190 Physcomitrium patens HOM05D005807 ORTHO05D007121 2.3e-25 119.8 106 55.7
Hund18849 Selenicereus undatus HOM05D005807 ORTHO05D007121 1.5e-24 117.1 64 84.4
Dinv34391 Davidia involucrata HOM05D005807 ORTHO05D007121 3.3e-24 115.9 64 85.9
ECA238G3051 Erigeron canadensis HOM05D005807 ORTHO05D007121 3.3e-24 115.9 64 84.4
Cfa011694 Carpinus fangiana HOM05D005807 ORTHO05D007121 4.2e-24 115.5 64 84.4
AUR62001647 Chenopodium quinoa HOM05D005807 ORTHO05D007121 5.5e-24 115.2 64 82.8
Medtr3g463620 Medicago truncatula HOM05D005807 ORTHO05D007121 9.5e-24 114.4 64 84.4
AUR62020129 Chenopodium quinoa HOM05D005807 ORTHO05D007121 1.2e-23 114.0 74 74.3
RcHm_v2.0_Chr6g0251941 Rosa chinensis HOM05D005807 ORTHO05D007121 1.2e-23 114.0 89 65.2
TPR.G21179 Trifolium pratense HOM05D005807 ORTHO05D007121 1.2e-23 114.0 94 63.8
Peaxi162Scf00540g00427 Petunia axillaris HOM05D005807 ORTHO05D007121 1.6e-23 113.6 64 79.7
ATR0618G394 Amborella trichopoda HOM05D005807 ORTHO05D007121 2.8e-23 112.8 87 66.7
CDE04G2455 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 2.0e-21 106.7 89 62.9
MCO15G629 Micromonas commoda HOM05D005807 ORTHO05D007121 1.4e-19 100.5 93 51.6
Haze_24321 Corylus avellana HOM05D005807 ORTHO05D007121 4.1e-19 99.0 92 57.6
Cre08.g369400 Chlamydomonas reinhardtii HOM05D005807 ORTHO05D007121 1.6e-18 97.1 99 49.5
BcaB01g04639 Brassica carinata HOM05D005807 ORTHO05D007121 4.3e-16 89.0 82 54.9
Gohir.A09G090400 Gossypium hirsutum HOM05D005807 ORTHO05D007121 6.8e-14 81.6 44 88.6
PRCOL_00004500 Prasinoderma coloniale HOM05D005807 ORTHO05D007121 1.2e-13 80.9 109 39.4
SHI19135 Sapria himalayana HOM05D005807 ORTHO05D007121 5.8e-13 78.6 70 61.4
Oeu010994.1 Olea europaea HOM05D005807 ORTHO05D007121 7.5e-13 78.2 53 67.9
Nn2g11480 Nelumbo nucifera HOM05D005807 ORTHO05D007121 1.7e-12 77.0 51 78.4
HanXRQChr12g0382081 Helianthus annuus HOM05D005807 ORTHO05D007121 2.3e-09 66.6 93 41.9
Lj8C68T13 Lonicera japonica HOM05D005807 ORTHO05D007121 1.2e-07 60.8 30 86.7


User provided reference genes

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