Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 1.7e-282 975.3 475 100.0
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 2.3e-236 822.0 474 83.5
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 1.1e-225 786.6 474 79.3
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 1.9e-225 785.8 473 78.0
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 1.7e-215 752.7 473 75.7
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.4e-214 747.3 475 75.2
Duzib106G1591 Durio zibethinus HOM05D003877 ORTHO05D004647 7.6e-211 737.3 472 73.7
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 2.2e-210 735.7 474 74.5
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 2.9e-210 735.3 476 73.5
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 8.4e-210 733.8 475 73.1
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 8.4e-210 733.8 474 71.5
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 8.4e-210 733.8 473 73.2
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 8.4e-210 733.8 473 73.8
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 1.9e-209 732.6 474 73.8
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.7e-208 728.8 474 71.1
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 4.6e-208 728.0 470 73.2
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 4.6e-208 728.0 474 73.4
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 6.0e-208 727.6 455 74.1
QL08p063706 Quercus lobata HOM05D003877 ORTHO05D004647 6.0e-208 727.6 469 74.0
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.0e-207 726.9 474 71.1
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 1.9e-206 722.6 465 73.1
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 4.3e-206 721.5 473 71.0
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 7.4e-206 720.7 470 71.9
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 7.4e-206 720.7 486 70.0
Glyma.18G024700 Glycine max HOM05D003877 ORTHO05D004647 3.7e-205 718.4 465 74.0
Cpa.g.sc19.135 Carica papaya HOM05D003877 ORTHO05D004647 1.1e-204 716.8 458 72.3
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 1.1e-204 716.8 467 72.6
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 2.6e-203 712.2 462 72.9
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 2.6e-203 712.2 474 71.7
Lalb_Chr08g0231521 Lupinus albus HOM05D003877 ORTHO05D004647 1.0e-202 710.3 458 72.7
Manes.07G134500 Manihot esculenta HOM05D003877 ORTHO05D004647 1.7e-202 709.5 474 72.2
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 2.9e-202 708.8 474 70.7
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.8e-202 708.4 465 72.9
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 3.8e-202 708.4 473 71.7
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 6.5e-202 707.6 474 70.5
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.1e-201 706.8 474 70.0
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.1e-201 706.8 474 70.0
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 1.1e-201 706.8 471 72.6
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 1.4e-201 706.4 475 69.7
Potri.008G072600 Populus trichocarpa HOM05D003877 ORTHO05D004647 1.4e-201 706.4 471 71.8
Lalb_Chr23g0277091 Lupinus albus HOM05D003877 ORTHO05D004647 4.2e-201 704.9 471 71.8
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 7.1e-201 704.1 463 72.1
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.2e-200 703.4 471 70.7
CiPaw.02G195400 Carya illinoinensis HOM05D003877 ORTHO05D004647 1.6e-200 703.0 469 72.7
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 2.1e-200 702.6 487 68.8
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 2.1e-200 702.6 473 70.4
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 2.7e-200 702.2 463 71.3
Potri.010G184600 Populus trichocarpa HOM05D003877 ORTHO05D004647 6.0e-200 701.0 472 70.1
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 7.9e-200 700.7 474 69.6
Gohir.D04G070400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.3e-199 699.9 469 70.6
CANSAT56G2949 Cannabis sativa HOM05D003877 ORTHO05D004647 5.1e-199 698.0 474 70.0
Haze_17269 Corylus avellana HOM05D003877 ORTHO05D004647 6.7e-199 697.6 441 75.1
Prupe.2G255400 Prunus persica HOM05D003877 ORTHO05D004647 8.7e-199 697.2 470 71.3
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 1.5e-198 696.4 460 72.2
arahy.Tifrunner.gnm1.ann1.EHZF9M Arachis hypogaea HOM05D003877 ORTHO05D004647 1.9e-198 696.0 470 69.6
Phvul.006G048800 Phaseolus vulgaris HOM05D003877 ORTHO05D004647 1.9e-198 696.0 475 70.9
PGSC0003DMG400030038 Solanum tuberosum HOM05D003877 ORTHO05D004647 3.3e-198 695.3 474 69.6
Hund13891 Selenicereus undatus HOM05D003877 ORTHO05D004647 9.6e-198 693.7 474 70.9
Solyc06g050990.3 Solanum lycopersicum HOM05D003877 ORTHO05D004647 1.3e-197 693.3 467 69.8
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 3.7e-197 691.8 471 69.9
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 6.3e-197 691.0 472 68.9
arahy.Tifrunner.gnm1.ann1.ZCM4RK Arachis hypogaea HOM05D003877 ORTHO05D004647 1.4e-196 689.9 475 68.8
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 1.8e-196 689.5 440 72.7
Dinv21772 Davidia involucrata HOM05D003877 ORTHO05D004647 2.4e-196 689.1 428 75.7
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 3.1e-196 688.7 565 60.0
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 6.9e-196 687.6 492 67.3
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 6.9e-196 687.6 497 66.6
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 6.9e-196 687.6 457 70.2
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 1.2e-195 686.8 469 67.2
Sopen06g016790 Solanum pennellii HOM05D003877 ORTHO05D004647 1.2e-195 686.8 467 69.2
arahy.Tifrunner.gnm1.ann1.EJG72V Arachis hypogaea HOM05D003877 ORTHO05D004647 1.0e-194 683.7 475 68.0
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 2.5e-193 679.1 462 69.5
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 4.2e-193 678.3 474 68.6
Sabra10G0141800 Salix brachista HOM05D003877 ORTHO05D004647 5.5e-193 677.9 505 64.6
CSS0004354 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.1e-192 676.0 413 75.8
Sc11g0005270 Simmondsia chinensis HOM05D003877 ORTHO05D004647 4.6e-192 674.9 470 68.9
PSO339G0345 Papaver somniferum HOM05D003877 ORTHO05D004647 1.8e-191 672.9 474 67.3
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 3.3e-190 668.7 469 68.4
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 3.3e-190 668.7 472 67.2
PSO349G0168 Papaver somniferum HOM05D003877 ORTHO05D004647 5.7e-190 667.9 453 69.8
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 1.6e-189 666.4 470 67.2
Hund15887 Selenicereus undatus HOM05D003877 ORTHO05D004647 1.6e-189 666.4 473 67.0
THA.LOC104824338 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 2.2e-189 666.0 468 66.9
CDE04G1002 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 2.8e-189 665.6 469 67.2
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 4.8e-189 664.8 466 69.3
Sabra08G0053900 Salix brachista HOM05D003877 ORTHO05D004647 6.9e-188 661.0 525 62.3
MSTRG.8927 Avicennia marina HOM05D003877 ORTHO05D004647 4.5e-187 658.3 455 68.4
Carub.0001s0925 Capsella rubella HOM05D003877 ORTHO05D004647 7.7e-187 657.5 474 65.2
Sp1g08500 Schrenkiella parvula HOM05D003877 ORTHO05D004647 1.3e-186 656.8 473 65.8
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 5.0e-186 654.8 472 66.1
CARHR009900 Cardamine hirsuta HOM05D003877 ORTHO05D004647 5.0e-186 654.8 470 65.3
Thhalv10007485m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 5.0e-186 654.8 473 64.7
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 1.9e-185 652.9 508 62.2
AL1G20470 Arabidopsis lyrata HOM05D003877 ORTHO05D004647 2.5e-185 652.5 474 65.0
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 7.2e-185 651.0 463 67.6
AT1G09870 Arabidopsis thaliana HOM05D003877 ORTHO05D004647 1.2e-184 650.2 474 64.3
SGA_v2.0_scaffold85G26692 Striga asiatica HOM05D003877 ORTHO05D004647 1.2e-184 650.2 484 64.3
AUR62022935 Chenopodium quinoa HOM05D003877 ORTHO05D004647 2.1e-184 649.4 475 65.3
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 2.7e-184 649.0 470 67.2
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 3.6e-184 648.7 490 65.1
ECA233G0637 Erigeron canadensis HOM05D003877 ORTHO05D004647 7.9e-184 647.5 459 66.7
AUR62012296 Chenopodium quinoa HOM05D003877 ORTHO05D004647 1.8e-183 646.4 475 65.3
PGSC0003DMG400027120 Solanum tuberosum HOM05D003877 ORTHO05D004647 5.1e-183 644.8 434 71.9
BcaC07g41857 Brassica carinata HOM05D003877 ORTHO05D004647 4.4e-182 641.7 469 64.2
C08p49240 Brassica napus HOM05D003877 ORTHO05D004647 4.4e-182 641.7 469 64.2
BolC8t52459H Brassica oleracea HOM05D003877 ORTHO05D004647 4.4e-182 641.7 469 64.2
BraA06t23872Z Brassica rapa HOM05D003877 ORTHO05D004647 4.4e-182 641.7 469 64.6
Sed0008918 Sechium edule HOM05D003877 ORTHO05D004647 5.7e-182 641.3 468 65.2
CSS0043221 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.4e-182 641.0 390 75.9
CSS0044757 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 6.3e-181 637.9 389 75.6
A06p06580 Brassica napus HOM05D003877 ORTHO05D004647 2.4e-180 636.0 469 64.4
BolC5t29551H Brassica oleracea HOM05D003877 ORTHO05D004647 1.2e-179 633.6 468 63.9
CsaV3_5G010390 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.5e-179 633.3 457 66.1
BraA09t41875Z Brassica rapa HOM05D003877 ORTHO05D004647 7.7e-179 630.9 475 62.9
C05p07990 Brassica napus HOM05D003877 ORTHO05D004647 1.0e-178 630.6 468 63.9
A09p65300 Brassica napus HOM05D003877 ORTHO05D004647 1.3e-178 630.2 475 62.9
MELO3C018375.2 Cucumis melo HOM05D003877 ORTHO05D004647 2.2e-178 629.4 468 65.2
BcaC05g24837 Brassica carinata HOM05D003877 ORTHO05D004647 8.5e-178 627.5 468 63.5
Aa31LG1G5020 Aethionema arabicum HOM05D003877 ORTHO05D004647 5.5e-177 624.8 474 62.9
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 7.2e-177 624.4 549 58.1
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 5.2e-175 618.2 467 64.0
Prupe.6G130900 Prunus persica HOM05D003877 ORTHO05D004647 4.8e-173 611.7 474 64.8
Os03g0818100 Oryza sativa ssp. japonica HOM05D003877 ORTHO05D004647 8.2e-173 610.9 450 64.2
ATR0681G014 Amborella trichopoda HOM05D003877 ORTHO05D004647 7.0e-172 607.8 437 68.4
ClCG07G004500 Citrullus lanatus HOM05D003877 ORTHO05D004647 9.1e-172 607.4 474 63.1
SalBow3G1521 Salvia bowleyana HOM05D003877 ORTHO05D004647 5.5e-169 598.2 608 52.0
Sed0009338 Sechium edule HOM05D003877 ORTHO05D004647 1.0e-167 594.0 452 62.6
Zm00001eb062330 Zea mays HOM05D003877 ORTHO05D004647 4.0e-167 592.0 486 59.7
Atru.chr12.96 Acer truncatum HOM05D003877 ORTHO05D004647 8.2e-165 584.3 433 65.6
Thhalv10002208m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 8.2e-165 584.3 410 65.4
Lsat_1_v5_gn_9_60880 Lactuca sativa HOM05D003877 ORTHO05D004647 4.1e-164 582.0 427 63.7
MELO3C034227.2 Cucumis melo HOM05D003877 ORTHO05D004647 5.5e-161 571.6 478 59.2
CsaV3_5G010430 Cucumis sativus L. HOM05D003877 ORTHO05D004647 8.3e-157 557.8 479 58.9
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 2.6e-150 536.2 488 54.7
CDE06G2086 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 1.0e-146 524.2 441 58.0
CsaV3_5G010400 Cucumis sativus L. HOM05D003877 ORTHO05D004647 7.5e-142 508.1 468 55.8
CSS0003433 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 4.6e-139 498.8 381 64.0
Mapoly0029s0098 Marchantia polymorpha HOM05D003877 ORTHO05D004647 3.3e-137 492.7 478 51.5
Solyc05g052480.4 Solanum lycopersicum HOM05D003877 ORTHO05D004647 3.3e-137 492.7 334 71.6
Pp3c24_6790 Physcomitrium patens HOM05D003877 ORTHO05D004647 5.2e-135 485.3 471 50.5
SMO271G0017 Selaginella moellendorffii HOM05D003877 ORTHO05D004647 2.3e-127 459.9 454 50.9
Pp3c8_15050 Physcomitrium patens HOM05D003877 ORTHO05D004647 7.8e-123 444.9 405 52.8
HPP92_019712 Vanilla planifolia HOM05D003877 ORTHO05D004647 4.1e-116 422.5 310 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2788 Anthoceros agrestis HOM05D003877 ORTHO05D004647 8.6e-114 414.8 524 44.1
SalBow3G0419 Salvia bowleyana HOM05D003877 ORTHO05D004647 1.8e-103 380.6 269 69.1
unitig_8.g4098 Utricularia gibba HOM05D003877 ORTHO05D004647 1.8e-87 327.4 296 54.7
SalBow3G3178 Salvia bowleyana HOM05D003877 ORTHO05D004647 1.3e-74 284.6 181 70.7
CsaV3_2G012250 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.9e-68 264.2 197 66.0
SGA_v2.0_scaffold85G26702 Striga asiatica HOM05D003877 ORTHO05D004647 1.0e-58 231.9 214 54.7
SEGI_29662 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 1.0e-50 205.3 159 62.3
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 3.5e-46 190.3 149 67.8
CBR_g38028 Chara braunii HOM05D003877 ORTHO05D004647 9.4e-44 182.2 326 34.0
Manes.09G077219 Manihot esculenta HOM05D003877 ORTHO05D004647 3.6e-43 180.3 99 84.8
TPR.G10202 Trifolium pratense HOM05D003877 ORTHO05D004647 3.1e-39 167.2 110 70.0
Cre13.g568600 Chlamydomonas reinhardtii HOM05D003877 ORTHO05D004647 2.0e-38 164.5 438 30.4
Lsat_1_v5_gn_5_175980 Lactuca sativa HOM05D003877 ORTHO05D004647 4.4e-33 146.7 113 60.2
Manes.18G042850 Manihot esculenta HOM05D003877 ORTHO05D004647 1.2e-30 138.7 111 64.0
Manes.06G044901 Manihot esculenta HOM05D003877 ORTHO05D004647 2.0e-30 137.9 111 64.0
CsaV3_2G012240 Cucumis sativus L. HOM05D003877 ORTHO05D004647 4.7e-27 126.7 86 65.1
SEGI_27537 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 5.2e-26 123.2 81 69.1
unitig_8.g4097 Utricularia gibba HOM05D003877 ORTHO05D004647 2.6e-25 120.9 103 55.3
Nn5g28638 Nelumbo nucifera HOM05D003877 ORTHO05D004647 3.7e-24 117.1 71 74.6
TPR.G5082 Trifolium pratense HOM05D003877 ORTHO05D004647 5.0e-21 106.7 67 67.2
Nn7g36267 Nelumbo nucifera HOM05D003877 ORTHO05D004647 1.9e-20 104.8 62 75.8
CSS0015783 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.8e-19 100.9 110 54.5
Carub.0003s0920 Capsella rubella HOM05D000468 ORTHO05D114682 9.8e-17 92.4 119 47.9
Manes.15G188901 Manihot esculenta HOM05D003877 ORTHO05D004647 3.0e-13 80.9 47 78.7
MELO3C018376.2 Cucumis melo HOM05D003877 ORTHO05D004647 8.1e-11 72.8 45 68.9
CSS0003201 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 6.8e-10 69.7 65 58.5
TPR.G5048 Trifolium pratense HOM05D003877 ORTHO05D004647 6.8e-10 69.7 76 50.0
TPR.G30156 Trifolium pratense HOM05D003877 ORTHO05D004647 5.8e-09 66.6 76 48.7
Lsat_1_v5_gn_6_23680 Lactuca sativa HOM05D001176 ORTHO05D014361 2.9e-08 64.3 60 53.3
MELO3C033083.2 Cucumis melo HOM05D003877 ORTHO05D034944 8.3e-08 62.8 40 72.5
ATR0681G284 Amborella trichopoda HOM05D003877 ORTHO05D038325 2.7e-06 57.8 35 54.3
PSO017G6761 Papaver somniferum HOM05D000240 ORTHO05D004647 6.0e-06 56.6 58 41.4
PSO063G3403 Papaver somniferum HOM05D000240 ORTHO05D002721 6.0e-06 56.6 35 65.7


User provided reference genes

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