Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0448 Trochodendron aralioides HOM05D005386 ORTHO05D006981 2.2e-177 625.5 324 100.0
GSVIVG01036080001 Vitis vinifera HOM05D005386 ORTHO05D006981 9.4e-120 434.1 320 70.6
Nn7g37254 Nelumbo nucifera HOM05D005386 ORTHO05D006981 1.5e-117 426.8 310 69.7
QL01p011847 Quercus lobata HOM05D005386 ORTHO05D006981 5.5e-112 408.3 324 66.7
Dinv08924 Davidia involucrata HOM05D005386 ORTHO05D006981 6.1e-111 404.8 298 69.8
Cfa009987 Carpinus fangiana HOM05D005386 ORTHO05D006981 6.3e-108 394.8 317 66.2
Haze_23346 Corylus avellana HOM05D005386 ORTHO05D006981 7.7e-106 387.9 322 64.6
Eucgr.J00523 Eucalyptus grandis HOM05D005386 ORTHO05D006981 7.7e-106 387.9 323 62.2
Hma1.2p1_0319F.1_g123920 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 1.0e-105 387.5 293 68.6
Potri.009G160500 Populus trichocarpa HOM05D005386 ORTHO05D006981 2.2e-105 386.3 325 63.7
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 6.5e-105 384.8 309 66.7
Manes.04G001400 Manihot esculenta HOM05D005386 ORTHO05D006981 1.5e-104 383.6 324 61.7
COL.COLO4_34005 Corchorus olitorius HOM05D005386 ORTHO05D006981 1.9e-104 383.3 325 63.1
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 3.2e-104 382.5 309 66.3
Lj1A257T31 Lonicera japonica HOM05D005386 ORTHO05D006981 1.2e-103 380.6 268 69.4
PSO339G6531 Papaver somniferum HOM05D005386 ORTHO05D006981 4.7e-103 378.6 324 62.7
Gorai.009G084000 Gossypium raimondii HOM05D005386 ORTHO05D006981 8.0e-103 377.9 294 65.3
Gohir.D05G082400 Gossypium hirsutum HOM05D005386 ORTHO05D006981 1.0e-102 377.5 294 65.3
Prupe.6G135900 Prunus persica HOM05D005386 ORTHO05D006981 1.8e-102 376.7 323 63.2
Ciclev10028837m.g Citrus clementina HOM05D005386 ORTHO05D006981 5.2e-102 375.2 329 60.2
TWI31G0673 Tripterygium wilfordii HOM05D005386 ORTHO05D006981 1.2e-101 374.0 316 59.8
Gohir.A05G079500 Gossypium hirsutum HOM05D005386 ORTHO05D006981 2.0e-101 373.2 294 65.0
Atru.chr3.3168 Acer truncatum HOM05D005386 ORTHO05D006981 4.4e-101 372.1 320 61.6
MBI19_g34002_MAGBIO Magnolia biondii HOM05D005386 ORTHO05D006981 5.7e-101 371.7 320 61.2
CiPaw.14G098000 Carya illinoinensis HOM05D005386 ORTHO05D006981 7.5e-101 371.3 294 65.6
PSO384G1357 Papaver somniferum HOM05D005386 ORTHO05D006981 1.7e-100 370.2 333 60.7
Glyma.11G181300 Glycine max HOM05D005386 ORTHO05D006981 2.2e-100 369.8 327 61.8
MD03G1149900 Malus domestica HOM05D005386 ORTHO05D006981 6.3e-100 368.2 322 60.9
ATR0307G012 Amborella trichopoda HOM05D005386 ORTHO05D006981 7.0e-99 364.8 320 61.9
CANSAT54G1533 Cannabis sativa HOM05D005386 ORTHO05D006981 1.6e-98 363.6 322 62.1
RcHm_v2.0_Chr5g0045261 Rosa chinensis HOM05D005386 ORTHO05D006981 1.6e-98 363.6 320 62.8
Sopen11g027400 Solanum pennellii HOM05D005386 ORTHO05D006981 5.9e-98 361.7 310 61.0
Duzib168G0172 Durio zibethinus HOM05D005386 ORTHO05D006981 2.3e-97 359.8 320 60.0
Solyc11g068680.2 Solanum lycopersicum HOM05D005386 ORTHO05D006981 2.3e-97 359.8 310 60.6
Lalb_Chr03g0028241 Lupinus albus HOM05D005386 ORTHO05D006981 1.1e-96 357.5 302 63.2
Cc01_g08820 Coffea canephora HOM05D005386 ORTHO05D006981 1.5e-96 357.1 312 61.9
Rhsim01G0203700 Rhododendron simsii HOM05D005386 ORTHO05D006981 2.5e-96 356.3 307 64.2
DCAR_022894 Daucus carota HOM05D005386 ORTHO05D006981 1.2e-95 354.0 273 64.1
Nitab4.5_0000731g0080 Nicotiana tabacum HOM05D005386 ORTHO05D006981 4.7e-95 352.1 298 62.4
Nitab4.5_0008177g0060 Nicotiana tabacum HOM05D005386 ORTHO05D006981 4.7e-95 352.1 298 62.1
FvH4_2g14080 Fragaria vesca HOM05D005386 ORTHO05D006981 6.1e-95 351.7 295 62.0
Sed0024067 Sechium edule HOM05D005386 ORTHO05D006981 4.0e-94 349.0 309 61.2
Ca_19443_v3 Cicer arietinum L. HOM05D005386 ORTHO05D006981 1.2e-93 347.4 323 58.8
Lj3g0020097 Lotus japonicus HOM05D005386 ORTHO05D006981 2.0e-93 346.7 330 58.2
MSTRG.18771 Avicennia marina HOM05D005386 ORTHO05D006981 7.5e-93 344.7 312 57.7
Peaxi162Scf00224g00218 Petunia axillaris HOM05D005386 ORTHO05D006981 1.7e-92 343.6 306 60.5
vmacro14339 Vaccinium macrocarpon HOM05D005386 ORTHO05D006981 3.7e-92 342.4 365 54.5
THA.LOC104810925 Tarenaya hassleriana HOM05D005386 ORTHO05D006981 6.3e-92 341.7 302 62.6
Sc06g0008690 Simmondsia chinensis HOM05D005386 ORTHO05D006981 1.4e-91 340.5 295 60.7
BolC3t13704H Brassica oleracea HOM05D005386 ORTHO05D006981 1.8e-91 340.1 305 60.0
C03p12310 Brassica napus HOM05D005386 ORTHO05D006981 3.2e-91 339.3 305 59.7
Psat7g187240 Pisum sativum HOM05D005386 ORTHO05D006981 4.1e-91 339.0 326 56.1
BraA03t10382Z Brassica rapa HOM05D005386 ORTHO05D006981 1.6e-90 337.0 300 61.0
CsaV3_1G015030 Cucumis sativus L. HOM05D005386 ORTHO05D006981 1.6e-90 337.0 289 62.6
Lsat_1_v5_gn_2_3840 Lactuca sativa HOM05D005386 ORTHO05D006981 1.6e-90 337.0 260 65.4
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea HOM05D005386 ORTHO05D006981 2.0e-90 336.7 325 56.6
ClCG01G011810 Citrullus lanatus HOM05D005386 ORTHO05D006981 2.7e-90 336.3 322 57.8
Sp6g22900 Schrenkiella parvula HOM05D005386 ORTHO05D006981 2.7e-90 336.3 303 59.7
Carub.0006s2008 Capsella rubella HOM05D005386 ORTHO05D006981 5.9e-90 335.1 308 58.8
ECA238G0234 Erigeron canadensis HOM05D005386 ORTHO05D006981 1.0e-89 334.3 261 64.8
AT5G22340 Arabidopsis thaliana HOM05D005386 ORTHO05D006981 2.3e-89 333.2 308 58.1
TPR.G17201 Trifolium pratense HOM05D005386 ORTHO05D006981 6.6e-89 331.6 294 58.5
AL6G33360 Arabidopsis lyrata HOM05D005386 ORTHO05D006981 8.6e-89 331.3 305 59.0
Glyma.12G091900 Glycine max HOM05D005386 ORTHO05D006981 1.5e-88 330.5 326 57.7
A03p10700 Brassica napus HOM05D005386 ORTHO05D006981 2.5e-88 329.7 304 59.9
Migut.D02364 Erythranthe guttata HOM05D005386 ORTHO05D006981 4.3e-88 328.9 312 58.7
EL10Ac9g22916 Beta vulgaris HOM05D005386 ORTHO05D006981 9.5e-88 327.8 319 54.5
HanXRQChr06g0183931 Helianthus annuus HOM05D005386 ORTHO05D006981 2.1e-87 326.6 349 53.0
Thhalv10014124m.g Eutrema salsugineum HOM05D005386 ORTHO05D006981 8.0e-87 324.7 292 59.2
Medtr4g052500 Medicago truncatula HOM05D005386 ORTHO05D006981 2.6e-85 319.7 286 60.5
Duzib170G0830 Durio zibethinus HOM05D005386 ORTHO05D006981 4.4e-85 318.9 264 63.6
FAN20G2771 Fragaria x ananassa HOM05D005386 ORTHO05D006981 8.3e-84 314.7 310 56.5
Actinidia37072 Actinidia chinensis HOM05D005386 ORTHO05D006981 1.6e-82 310.5 323 56.7
CDE08G0019 Ceratophyllum demersum HOM05D005386 ORTHO05D006981 6.6e-81 305.1 320 54.4
PGR119G1266 Punica granatum HOM05D005386 ORTHO05D006981 1.2e-79 300.8 288 59.4
SEGI_27763 Sequoiadendron giganteum HOM05D005386 ORTHO05D006981 8.0e-79 298.1 275 52.4
Os03g0322600 Oryza sativa ssp. japonica HOM05D005386 ORTHO05D006981 4.0e-78 295.8 290 53.1
BcaB01g04714 Brassica carinata HOM05D005386 ORTHO05D006981 7.5e-77 291.6 305 54.1
Zm00001eb395560 Zea mays HOM05D005386 ORTHO05D006981 7.5e-77 291.6 306 52.0
Ah.01g001670 Amaranthus hybridus HOM05D005386 ORTHO05D006981 1.3e-76 290.8 314 51.3
Aqoxy1G00008 Aquilegia oxysepala HOM05D005386 ORTHO05D006981 1.7e-76 290.4 274 58.0
Hund18776 Selenicereus undatus HOM05D005386 ORTHO05D006981 1.4e-75 287.3 428 41.6
HPP92_001703 Vanilla planifolia HOM05D005386 ORTHO05D006981 2.1e-74 283.5 298 53.7
BcaC01g06587 Brassica carinata HOM05D005386 ORTHO05D006981 1.7e-73 280.4 322 50.3
SGA_v2.0_scaffold7G04001 Striga asiatica HOM05D005386 ORTHO05D006981 1.7e-73 280.4 278 55.8
arahy.Tifrunner.gnm1.ann1.PADK5G Arachis hypogaea HOM05D005386 ORTHO05D006981 1.1e-72 277.7 332 50.6
MELO3C025590.2 Cucumis melo HOM05D005386 ORTHO05D006981 2.5e-72 276.6 258 59.7
unitig_736.g22394 Utricularia gibba HOM05D005386 ORTHO05D006981 2.0e-69 266.9 269 54.6
TAR633G2192 Trochodendron aralioides HOM05D005386 ORTHO05D006981 1.0e-65 254.6 136 98.5
Zm00001eb015340 Zea mays HOM05D005386 ORTHO05D006981 4.7e-63 245.7 203 60.1
FAN24G0713 Fragaria x ananassa HOM05D005386 ORTHO05D006981 1.2e-61 241.1 317 47.9
Phvul.011G096200 Phaseolus vulgaris HOM05D005386 ORTHO05D006981 1.2e-61 241.1 236 56.8
Oeu014472.1 Olea europaea HOM05D005386 ORTHO05D006981 2.0e-61 240.4 159 75.5
Hma1.2p1_0319F.1_g123910 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 1.3e-60 237.7 152 78.9
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 2.2e-60 236.9 269 47.6
Zm00001eb285540 Zea mays HOM05D005386 ORTHO05D006981 2.9e-60 236.5 260 49.2
AUR62017661 Chenopodium quinoa HOM05D005386 ORTHO05D006981 9.3e-59 231.5 279 47.3
AUR62015198 Chenopodium quinoa HOM05D005386 ORTHO05D006981 1.0e-57 228.0 268 48.5
BcaC01g06590 Brassica carinata HOM05D005386 ORTHO05D006981 6.6e-57 225.3 237 54.0
Cpa.g.sc195.24 Carica papaya HOM05D005386 ORTHO05D006981 8.1e-55 218.4 156 74.4
Aa31LG1G13200 Aethionema arabicum HOM05D005386 ORTHO05D006981 4.0e-54 216.1 219 55.7
AagrBONN_evm.TU.Sc2ySwM_228.4159 Anthoceros agrestis HOM05D005386 ORTHO05D006981 1.2e-50 204.5 277 40.4
SalBow6G0611 Salvia bowleyana HOM05D005386 ORTHO05D006981 1.1e-46 191.4 267 44.2
FAN15G3687 Fragaria x ananassa HOM05D005386 ORTHO05D006981 1.5e-45 187.6 130 72.3
AUR62014970 Chenopodium quinoa HOM05D005386 ORTHO05D006981 2.2e-44 183.7 270 43.7
VMungo1127G0965 Vigna mungo HOM05D005386 ORTHO05D006981 1.4e-38 164.5 155 56.8
SMO140G0002 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 2.0e-37 160.6 279 37.6
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 5.8e-37 159.1 209 43.5
Ciclev10029637m.g Citrus clementina HOM05D005386 ORTHO05D006981 1.3e-36 157.9 103 75.7
Thecc.09G278700 Theobroma cacao HOM05D005386 ORTHO05D006981 2.9e-36 156.8 198 46.0
Pp3c20_23100 Physcomitrium patens HOM05D005386 ORTHO05D006981 1.4e-35 154.5 175 46.3
Ciclev10029895m.g Citrus clementina HOM05D005386 ORTHO05D006981 5.1e-33 146.0 103 71.8
FAN24G3375 Fragaria x ananassa HOM05D005386 ORTHO05D006981 4.5e-29 132.9 142 49.3
AUR62043809 Chenopodium quinoa HOM05D004271 ORTHO05D006011 8.4e-28 128.6 139 52.5
VMungo1127G1152 Vigna mungo HOM05D005386 ORTHO05D006981 1.2e-26 124.8 82 75.6
FvH4_2g10370 Fragaria vesca HOM05D005386 ORTHO05D006981 6.1e-26 122.5 130 53.8
CARHR191200 Cardamine hirsuta HOM05D005386 ORTHO05D006981 1.3e-25 121.3 151 47.0
Aa31LG1G13190 Aethionema arabicum HOM05D005386 ORTHO05D006981 3.0e-25 120.2 86 67.4
arahy.Tifrunner.gnm1.ann1.M18R9V Arachis hypogaea HOM05D005386 ORTHO05D006981 1.1e-24 118.2 105 59.0
arahy.Tifrunner.gnm1.ann1.XDN0DP Arachis hypogaea HOM05D005386 ORTHO05D006981 3.1e-14 83.6 72 59.7
arahy.Tifrunner.gnm1.ann1.J76LRM Arachis hypogaea HOM05D005386 ORTHO05D006981 4.5e-13 79.7 88 54.5
Hma1.2p1_0319F.1_g123930 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 8.5e-12 75.5 84 51.2
arahy.Tifrunner.gnm1.ann1.TQJ2IB Arachis hypogaea HOM05D005386 ORTHO05D006981 1.4e-11 74.7 81 55.6
Cpa.g.sc195.25 Carica papaya HOM05D005386 ORTHO05D006981 2.1e-10 70.9 61 60.7
Cpa.g.sc195.26 Carica papaya HOM05D005386 ORTHO05D006981 2.1e-10 70.9 109 41.3
FvH4_2g10360 Fragaria vesca HOM05D005386 ORTHO05D006981 5.1e-09 66.2 46 63.0
FvH4_2g10341 Fragaria vesca HOM05D005386 ORTHO05D006981 8.8e-09 65.5 83 50.6
arahy.Tifrunner.gnm1.ann1.9EB2HI Arachis hypogaea HOM05D005386 ORTHO05D006981 2.6e-08 63.9 66 57.6
MD09G1069600 Malus domestica HOM05D005386 ORTHO05D006981 7.4e-08 62.4 102 41.2
arahy.Tifrunner.gnm1.ann1.CXSI0G Arachis hypogaea HOM05D000290 ORTHO05D002418 2.2e-07 60.8 54 57.4
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 4.8e-07 59.7 162 28.4
arahy.Tifrunner.gnm1.ann1.XD28JK Arachis hypogaea HOM05D005386 ORTHO05D006981 4.8e-07 59.7 64 57.8
CBR_g22416 Chara braunii HOM05D005386 ORTHO05D006981 8.2e-07 58.9 90 34.4
Ciclev10029903m.g Citrus clementina HOM05D005386 ORTHO05D006981 8.2e-07 58.9 51 49.0


User provided reference genes

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