Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0438 Trochodendron aralioides HOM05D001033 ORTHO05D004888 9.0e-74 280.0 129 100.0
Nn021s41548 Nelumbo nucifera HOM05D001033 ORTHO05D004888 1.4e-26 123.2 58 94.8
PGR111G0105 Punica granatum HOM05D001033 ORTHO05D004888 1.6e-25 119.8 58 89.7
PSO548G0080 Papaver somniferum HOM05D001033 ORTHO05D004888 2.7e-25 119.0 58 91.4
RcHm_v2.0_CPg0502181 Rosa chinensis HOM05D001033 ORTHO05D004888 3.5e-25 118.6 58 87.9
COL.COLO4_03102 Corchorus olitorius HOM05D001033 ORTHO05D004888 4.5e-25 118.2 58 87.9
Gohir.1Z049399 Gossypium hirsutum HOM05D001033 ORTHO05D004888 4.5e-25 118.2 58 87.9
Gohir.A09G102100 Gossypium hirsutum HOM05D001033 ORTHO05D004888 4.5e-25 118.2 58 87.9
Gorai.001G177200 Gossypium raimondii HOM05D001033 ORTHO05D004888 4.5e-25 118.2 58 87.9
Hma1.2p1_2223F.1_g317410 Hydrangea macrophylla HOM05D001033 ORTHO05D004888 4.5e-25 118.2 58 87.9
ATR0303G003 Amborella trichopoda HOM05D001033 ORTHO05D004888 7.8e-25 117.5 58 86.2
Gohir.D03G073392 Gossypium hirsutum HOM05D001033 ORTHO05D004888 7.8e-25 117.5 58 87.9
Sed0011576 Sechium edule HOM05D001033 ORTHO05D004888 7.8e-25 117.5 56 91.1
Sed0015951 Sechium edule HOM05D000680 ORTHO05D000738 7.8e-25 117.5 56 91.1
Sed0016230 Sechium edule HOM05D001033 ORTHO05D004888 7.8e-25 117.5 56 91.1
Migut.D01427 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 87.9
HanXRQChr00c0345g0573891 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr00c0702g0576871 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr02g0041501 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr02g0044951 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr07g0201011 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr08g0210301 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr10g0283491 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr10g0285321 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr10g0289211 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr10g0303781 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQChr11g0326761 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
HanXRQCPg0579971 Helianthus annuus HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 86.2
QL93p0270_0002 Quercus lobata HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 87.9
SalBow1G1376 Salvia bowleyana HOM05D001033 ORTHO05D004888 1.0e-24 117.1 58 87.9
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 1.3e-24 116.7 58 86.2
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 1.3e-24 116.7 58 86.2
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 1.3e-24 116.7 58 86.2
CSS0012650 Camellia sinensis var. sinensis HOM05D001033 ORTHO05D004888 1.7e-24 116.3 58 87.9
DCAR_032487 Daucus carota HOM05D001033 ORTHO05D004888 1.7e-24 116.3 58 84.5
HanXRQChr15g0480701 Helianthus annuus HOM05D001033 ORTHO05D004888 1.7e-24 116.3 58 86.2
Sc19g0006000 Simmondsia chinensis HOM05D001033 ORTHO05D004888 2.3e-24 115.9 58 86.2
Ah.09g227310 Amaranthus hybridus HOM05D001033 ORTHO05D004888 2.9e-24 115.5 58 87.9
Ah.10g027550 Amaranthus hybridus HOM05D001033 ORTHO05D004888 2.9e-24 115.5 58 87.9
unitig_91.g26504 Utricularia gibba HOM05D001033 ORTHO05D004888 2.9e-24 115.5 58 86.2
Potri.013G163200 Populus trichocarpa HOM05D001033 ORTHO05D004888 3.8e-24 115.2 59 84.7
Medtr4g035040 Medicago truncatula HOM05D001033 ORTHO05D004888 5.0e-24 114.8 58 82.8
Medtr7g021800 Medicago truncatula HOM05D001033 ORTHO05D004888 5.0e-24 114.8 58 82.8
Sed0001763 Sechium edule HOM05D001033 ORTHO05D004888 6.6e-24 114.4 56 89.3
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 8.6e-24 114.0 58 86.2
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 8.6e-24 114.0 58 86.2
EL10As5g23626 Beta vulgaris HOM05D001033 ORTHO05D004888 8.6e-24 114.0 58 86.2
TWI36G0295 Tripterygium wilfordii HOM05D001033 ORTHO05D004888 1.1e-23 113.6 58 84.5
CAN.G219.25 Capsicum annuum HOM05D001033 ORTHO05D004888 1.5e-23 113.2 58 86.2
Peaxi162Scf00334g00124 Petunia axillaris HOM05D001033 ORTHO05D004888 1.5e-23 113.2 58 86.2
EL10Ac4g08633 Beta vulgaris HOM05D001033 ORTHO05D004888 1.9e-23 112.8 74 68.9
Phvul.011G056548 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 1.9e-23 112.8 58 79.3
vmacro22414 Vaccinium macrocarpon HOM05D001033 ORTHO05D004888 4.3e-23 111.7 58 84.5
CAN.G170.11 Capsicum annuum HOM05D001033 ORTHO05D004888 5.6e-23 111.3 58 82.8
Lalb_Chr07g0192231 Lupinus albus HOM05D001033 ORTHO05D004888 5.6e-23 111.3 58 79.3
Lalb_Chr07g0192281 Lupinus albus HOM05D001033 ORTHO05D004888 5.6e-23 111.3 58 79.3
Lalb_Chr20g0115661 Lupinus albus HOM05D001033 ORTHO05D004888 5.6e-23 111.3 58 79.3
VMungo0498G0002 Vigna mungo HOM05D001033 ORTHO05D004888 5.6e-23 111.3 58 77.6
Eucgr.A02747 Eucalyptus grandis HOM05D001033 ORTHO05D004888 7.3e-23 110.9 58 86.2
Medtr0002s0630 Medicago truncatula HOM05D001033 ORTHO05D004888 9.5e-23 110.5 58 82.8
Lj2C1237T30 Lonicera japonica HOM05D001033 ORTHO05D004888 1.6e-22 109.8 52 90.4
Lj2C1239T58 Lonicera japonica HOM05D001033 ORTHO05D004888 1.6e-22 109.8 52 90.4
Lj2C1239T8 Lonicera japonica HOM05D001033 ORTHO05D004888 1.6e-22 109.8 52 90.4
Duzib192G0593 Durio zibethinus HOM05D001033 ORTHO05D004888 2.1e-22 109.4 54 87.0
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 2.8e-22 109.0 58 77.6
MBI06_g39081_MAGBIO Magnolia biondii HOM05D001033 ORTHO05D004888 2.8e-22 109.0 51 92.2
Solyc00g500061.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 2.8e-22 109.0 58 82.8
arahy.Tifrunner.gnm1.ann1.GNV4IL Arachis hypogaea HOM05D001033 ORTHO05D004888 4.7e-22 108.2 58 75.9
ATCG00420 Arabidopsis thaliana HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
A06p23250 Brassica napus HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BNapus_Darmor_BZH_scaffold_253p00160 Brassica napus HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BNapus_Darmor_BZH_scaffold_287p00080 Brassica napus HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
C02p43470 Brassica napus HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
C09p40480 Brassica napus HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BolSC29t60582H Brassica oleracea HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BolSC45t60865H Brassica oleracea HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BolSC45t60947H Brassica oleracea HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BolSC46t60994H Brassica oleracea HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BolSC46t61041H Brassica oleracea HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BolSC47t61103H Brassica oleracea HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BraSC25t45841Z Brassica rapa HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BraSC25t45874Z Brassica rapa HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BraSC58t46413Z Brassica rapa HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
BraSC58t46484Z Brassica rapa HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
CARHR282040 Cardamine hirsuta HOM05D001033 ORTHO05D004888 6.1e-22 107.8 58 81.0
Gohir.D07G155032 Gossypium hirsutum HOM05D001033 ORTHO05D004888 8.0e-22 107.5 58 81.0
EL10Ac9g20715 Beta vulgaris HOM05D001033 ORTHO05D004888 1.0e-21 107.1 76 63.2
Gorai.005G187900 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.8e-21 106.3 58 79.3
PSO302G0237 Papaver somniferum HOM05D001033 ORTHO05D004888 2.3e-21 105.9 52 88.5
AL2G21460 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 3.0e-21 105.5 58 79.3
C02p28640 Brassica napus HOM05D001033 ORTHO05D004888 3.0e-21 105.5 66 72.7
BolC2t08910H Brassica oleracea HOM05D001033 ORTHO05D004888 3.0e-21 105.5 66 72.7
Gohir.D07G099350 Gossypium hirsutum HOM05D001033 ORTHO05D004888 4.0e-21 105.1 58 81.0
arahy.Tifrunner.gnm1.ann1.XVSZ20 Arachis hypogaea HOM05D001033 ORTHO05D004888 5.2e-21 104.8 52 82.7
Nitab4.5_0001761g0190 Nicotiana tabacum HOM05D001033 ORTHO05D004888 6.8e-21 104.4 58 81.0
Gohir.A09G102850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 8.9e-21 104.0 53 83.0
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 1.2e-20 103.6 58 75.9
Gorai.009G225200 Gossypium raimondii HOM05D001033 ORTHO05D004888 4.4e-20 101.7 49 87.8
Solyc00g500142.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 4.4e-20 101.7 58 79.3
CAN.G1183.6 Capsicum annuum HOM05D001033 ORTHO05D004888 5.7e-20 101.3 58 79.3
AL2G20710 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 9.8e-20 100.5 52 84.6
BraA06t25427Z Brassica rapa HOM05D001033 ORTHO05D004888 1.3e-19 100.1 58 75.9
Nitab4.5_0005412g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 1.3e-19 100.1 52 82.7
Nn071s42392 Nelumbo nucifera HOM05D001033 ORTHO05D004888 2.9e-19 99.0 46 97.8
Solyc01g056470.1 Solanum lycopersicum HOM05D000890 ORTHO05D004888 2.9e-19 99.0 75 64.0
Nitab4.5_0011099g0060 Nicotiana tabacum HOM05D001033 ORTHO05D004888 8.3e-19 97.4 51 84.3
BolC9t55818H Brassica oleracea HOM05D001033 ORTHO05D004888 1.1e-18 97.1 58 72.4
Lsat_1_v5_gn_2_5601 Lactuca sativa HOM05D001033 ORTHO05D004888 1.1e-18 97.1 50 84.0
Nitab4.5_0001841g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 1.4e-18 96.7 58 74.1
Gohir.D05G218250 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.8e-18 96.3 47 85.1
SEGI_35798 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 2.4e-18 95.9 71 63.4
CAN.G100.48 Capsicum annuum HOM05D001033 ORTHO05D004888 7.0e-18 94.4 49 81.6
CAN.G91.9 Capsicum annuum HOM05D001033 ORTHO05D004888 1.6e-17 93.2 58 70.7
SEGI_19633 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.6e-17 93.2 68 64.7
Oeu062837.1 Olea europaea HOM05D001033 ORTHO05D004888 4.6e-17 91.7 58 74.1
Migut.D01354 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.0e-16 90.5 44 93.2
BolC7t41665H Brassica oleracea HOM05D001033 ORTHO05D004888 2.3e-16 89.4 52 80.8
Prupe.1G270900 Prunus persica HOM05D001033 ORTHO05D004888 2.3e-16 89.4 42 92.9
Sed0007524 Sechium edule HOM05D000680 ORTHO05D000738 3.3e-15 85.5 56 73.2
Gohir.D01G102242 Gossypium hirsutum HOM05D001033 ORTHO05D004888 9.5e-15 84.0 41 90.2
Hund10567 Selenicereus undatus HOM05D001033 ORTHO05D004888 1.2e-14 83.6 80 52.5
SMO086G0027 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-13 79.7 60 63.3
SMO086G0049 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-13 79.7 60 63.3
SMO233G0001 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-13 79.7 60 63.3
Nn1g03019 Nelumbo nucifera HOM05D001033 ORTHO05D004888 7.5e-12 74.3 43 83.7
Thhalv10010993m.g Eutrema salsugineum HOM05D001033 ORTHO05D004888 1.7e-11 73.2 40 82.5
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 4.9e-11 71.6 39 82.1
Gorai.001G107100 Gossypium raimondii HOM05D001033 ORTHO05D004888 4.9e-11 71.6 39 87.2
PGSC0003DMG400002651 Solanum tuberosum HOM05D001033 ORTHO05D004888 1.1e-10 70.5 39 84.6
BolSC29t60459H Brassica oleracea HOM05D001033 ORTHO05D004888 9.2e-10 67.4 36 83.3
AUR62014217 Chenopodium quinoa HOM05D001033 ORTHO05D002045 7.8e-09 64.3 32 87.5
unitig_87.g27944 Utricularia gibba HOM05D000388 ORTHO05D004888 7.8e-09 64.3 45 62.2
ClCG00G002680 Citrullus lanatus HOM05D001033 ORTHO05D004888 1.7e-08 63.2 48 60.4
TAR338G0003 Trochodendron aralioides HOM05D001033 ORTHO05D004888 6.6e-08 61.2 30 93.3
ClCG07G012530 Citrullus lanatus HOM05D001033 ORTHO05D004888 8.6e-08 60.8 30 83.3
arahy.Tifrunner.gnm1.ann1.WN69VX Arachis hypogaea HOM05D001033 ORTHO05D004888 1.5e-07 60.1 30 86.7
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 1.5e-07 60.1 30 90.0
Peaxi162Scf00110g00002 Petunia axillaris HOM05D001033 ORTHO05D004888 1.5e-07 60.1 30 90.0
DCAR_022590 Daucus carota HOM05D013260 ORTHO05D004888 3.3e-07 58.9 31 83.9
Haze_27536 Corylus avellana HOM05D001033 ORTHO05D004888 5.6e-07 58.2 30 83.3
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.6e-07 58.2 36 69.4
SEGI_08348 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.6e-06 56.6 60 50.0
MELO3C029536.2 Cucumis melo HOM05D001033 ORTHO05D004888 2.8e-06 55.8 30 80.0
SEGI_38193 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 3.6e-06 55.5 44 61.4


User provided reference genes

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