Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0430 Trochodendron aralioides HOM05D010615 ORTHO05D012504 5.4e-30 133.7 67 100.0
CiPaw.02G173000 Carya illinoinensis HOM05D010615 ORTHO05D012504 6.0e-13 77.0 59 62.7
Nn2g13736 Nelumbo nucifera HOM05D010615 ORTHO05D012504 7.4e-11 70.1 58 58.6
Medtr1g049270 Medicago truncatula HOM05D010615 ORTHO05D012504 1.6e-10 68.9 59 55.9
TPR.G35689 Trifolium pratense HOM05D010615 ORTHO05D012504 1.6e-10 68.9 59 54.2
Glyma.02G157133 Glycine max HOM05D010615 ORTHO05D012504 8.2e-10 66.6 59 54.2
Hma1.2p1_1458F.1_g284740 Hydrangea macrophylla HOM05D010615 ORTHO05D012504 1.8e-09 65.5 65 47.7
Hma1.2p1_1927F.1_g307795 Hydrangea macrophylla HOM05D010615 ORTHO05D012504 1.8e-09 65.5 65 47.7
Nn2g11526 Nelumbo nucifera HOM05D010615 ORTHO05D012504 5.3e-09 63.9 57 50.9
Nn2g11525 Nelumbo nucifera HOM05D010615 ORTHO05D012504 9.0e-09 63.2 57 50.9
Prupe.2G211500 Prunus persica HOM05D010615 ORTHO05D012504 2.6e-08 61.6 54 53.7
Lalb_Chr01g0010471 Lupinus albus HOM05D010615 ORTHO05D012504 5.8e-08 60.5 59 52.5
Haze_16861 Corylus avellana HOM05D010615 ORTHO05D012504 7.6e-08 60.1 61 52.5
Cfa001673 Carpinus fangiana HOM05D010615 ORTHO05D012504 1.7e-07 58.9 55 49.1
FAN03G3076 Fragaria x ananassa HOM05D010615 ORTHO05D012504 6.5e-07 57.0 65 46.2
FAN06G2525 Fragaria x ananassa HOM05D010615 ORTHO05D012504 6.5e-07 57.0 65 47.7
FAN06G4430 Fragaria x ananassa HOM05D010615 ORTHO05D012504 6.5e-07 57.0 65 47.7
FAN10G0686 Fragaria x ananassa HOM05D010615 ORTHO05D012504 1.1e-06 56.2 65 47.7
RcHm_v2.0_Chr1g0362981 Rosa chinensis HOM05D010615 ORTHO05D012504 1.4e-06 55.8 67 46.3


User provided reference genes

Program Settings