Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 8.8e-125 450.3 226 100.0
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 5.9e-20 102.1 128 46.9
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 7.7e-20 101.7 145 42.8
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 2.5e-18 96.7 134 46.3
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 3.2e-18 96.3 122 46.7
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 4.2e-18 95.9 129 40.3
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 9.4e-18 94.7 134 41.8
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 9.4e-18 94.7 124 42.7
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.0e-16 91.3 74 58.1
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 5.2e-16 89.0 137 39.4
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 8.8e-16 88.2 141 38.3
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 2.6e-15 86.7 148 43.2
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 2.6e-15 86.7 128 43.0
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 4.4e-15 85.9 127 40.9
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 9.8e-15 84.7 126 39.7
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 3.7e-14 82.8 140 40.7
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 8.3e-14 81.6 125 37.6
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.1e-13 81.3 130 36.9
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.1e-13 81.3 142 36.6
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.4e-13 80.9 130 36.9
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.4e-13 80.1 130 36.9
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 4.1e-13 79.3 119 43.7
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 9.1e-13 78.2 133 38.3
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.2e-12 77.8 130 35.4
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 1.6e-12 77.4 100 44.0
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.6e-12 77.4 119 39.5
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 4.5e-12 75.9 137 40.1
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 4.5e-12 75.9 128 35.9
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 4.5e-12 75.9 144 36.1
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 7.7e-12 75.1 74 50.0
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 7.7e-12 75.1 74 50.0
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 1.0e-11 74.7 128 38.3
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.3e-11 74.3 125 40.0
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 2.2e-11 73.6 110 39.1
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 2.2e-11 73.6 138 35.5
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 2.9e-11 73.2 144 35.4
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 6.5e-11 72.0 88 44.3
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 1.1e-10 71.2 90 38.9
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 1.1e-10 71.2 126 35.7
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 1.1e-10 71.2 135 34.8
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.9e-10 70.5 102 36.3
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.9e-10 70.5 147 32.0
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.9e-10 70.5 113 37.2
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.9e-10 70.5 132 31.8
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.9e-10 70.5 132 31.8
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 3.2e-10 69.7 137 38.7
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 3.2e-10 69.7 90 40.0
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 3.2e-10 69.7 118 34.7
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 3.2e-10 69.7 72 47.2
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 3.2e-10 69.7 153 33.3
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 4.2e-10 69.3 84 42.9
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 4.2e-10 69.3 134 33.6
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 4.2e-10 69.3 140 30.0
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 5.5e-10 68.9 63 50.8
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 7.2e-10 68.6 131 32.8
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 9.4e-10 68.2 48 54.2
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 1.2e-09 67.8 147 32.0
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.6e-09 67.4 134 35.8
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 2.1e-09 67.0 91 38.5
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 2.7e-09 66.6 59 50.8
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 2.7e-09 66.6 64 43.8
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 2.7e-09 66.6 158 32.3
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 4.7e-09 65.9 155 31.0
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 4.7e-09 65.9 56 55.4
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 8.0e-09 65.1 130 36.2
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 8.0e-09 65.1 132 31.1
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 8.0e-09 65.1 132 35.6
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.4e-08 64.3 84 40.5
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.4e-08 64.3 84 40.5
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 1.8e-08 63.9 114 33.3
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 2.3e-08 63.5 140 31.4
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 3.0e-08 63.2 138 31.2
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 4.0e-08 62.8 122 33.6
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 5.2e-08 62.4 130 37.7
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 6.8e-08 62.0 101 33.7
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 8.8e-08 61.6 69 46.4
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 1.2e-07 61.2 96 38.5
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 1.5e-07 60.8 129 31.0
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 1.5e-07 60.8 130 28.5
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 2.0e-07 60.5 129 33.3
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 2.6e-07 60.1 123 35.8
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 2.6e-07 60.1 95 37.9
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 2.6e-07 60.1 126 37.3
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 3.4e-07 59.7 69 43.5
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 4.4e-07 59.3 113 29.2
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 5.7e-07 58.9 138 30.4
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 7.5e-07 58.5 100 38.0
Os01g0969000 Oryza sativa ssp. japonica HOM05D068021 ORTHO05D008874 1.3e-06 57.8 41 51.2
EL10Ac4g08229 Beta vulgaris HOM05D034697 ORTHO05D008874 1.7e-06 57.4 79 44.3
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.7e-06 57.4 138 29.7
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 1.7e-06 57.4 130 31.5
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 2.2e-06 57.0 84 40.5
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 3.7e-06 56.2 69 44.9
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 3.7e-06 56.2 89 34.8
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 8.3e-06 55.1 124 31.5


User provided reference genes

Program Settings