Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 1.4e-75 286.2 145 100.0
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 1.4e-67 259.6 145 87.6
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 1.7e-65 252.7 145 84.8
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 4.3e-64 248.1 145 84.1
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 9.5e-64 246.9 145 83.4
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 1.6e-63 246.1 142 85.9
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 1.6e-63 246.1 142 83.8
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 4.7e-63 244.6 145 81.4
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 6.2e-63 244.2 142 83.8
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 8.1e-63 243.8 145 81.4
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 1.1e-62 243.4 142 84.5
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 1.1e-62 243.4 142 84.5
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 2.3e-62 242.3 145 83.4
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 3.1e-62 241.9 142 82.4
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 5.2e-62 241.1 142 83.8
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 6.8e-62 240.7 145 82.1
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 1.2e-61 240.0 142 83.8
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 2.0e-61 239.2 142 81.0
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 2.0e-61 239.2 145 81.4
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 2.6e-61 238.8 142 83.1
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 2.6e-61 238.8 145 80.7
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 3.4e-61 238.4 144 79.2
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 7.5e-61 237.3 145 80.7
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 7.5e-61 237.3 145 80.7
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 9.9e-61 236.9 141 82.3
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 9.9e-61 236.9 145 81.4
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 9.9e-61 236.9 145 77.9
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 1.7e-60 236.1 145 81.4
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 1.7e-60 236.1 141 83.0
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 6.4e-60 234.2 141 80.1
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 8.3e-60 233.8 141 80.9
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 1.4e-59 233.0 141 80.1
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.4e-59 233.0 145 80.0
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 1.4e-59 233.0 145 77.2
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 1.9e-59 232.6 141 80.9
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 3.2e-59 231.9 148 78.4
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 4.1e-59 231.5 141 78.7
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 1.2e-58 229.9 142 78.9
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 1.6e-58 229.6 141 78.7
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 2.1e-58 229.2 143 76.2
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 2.1e-58 229.2 143 77.6
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 2.7e-58 228.8 142 79.6
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 4.6e-58 228.0 142 76.8
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 4.6e-58 228.0 141 78.7
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 6.0e-58 227.6 145 75.9
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 7.8e-58 227.3 145 81.4
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 1.0e-57 226.9 141 78.0
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 1.0e-57 226.9 141 78.7
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 1.3e-57 226.5 143 76.2
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.7e-57 226.1 142 74.6
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 1.7e-57 226.1 145 73.8
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 1.7e-57 226.1 142 78.9
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 2.3e-57 225.7 141 74.5
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 2.3e-57 225.7 141 76.6
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 2.3e-57 225.7 141 76.6
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 3.0e-57 225.3 141 76.6
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 3.0e-57 225.3 141 76.6
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 3.9e-57 224.9 141 76.6
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 3.9e-57 224.9 141 76.6
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 3.9e-57 224.9 143 74.8
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 3.9e-57 224.9 141 77.3
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 3.9e-57 224.9 145 80.7
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 5.1e-57 224.6 143 74.1
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 5.1e-57 224.6 143 74.8
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 6.6e-57 224.2 143 76.9
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 8.6e-57 223.8 141 72.3
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 8.6e-57 223.8 141 76.6
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 8.6e-57 223.8 141 77.3
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 1.1e-56 223.4 141 75.2
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 1.5e-56 223.0 141 76.6
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 1.9e-56 222.6 143 76.9
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 2.5e-56 222.2 141 76.6
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.5e-56 222.2 141 74.5
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 2.5e-56 222.2 142 75.4
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 3.3e-56 221.9 141 75.2
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 3.3e-56 221.9 143 74.8
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 3.3e-56 221.9 143 76.9
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 4.3e-56 221.5 141 75.9
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 4.3e-56 221.5 141 73.8
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 4.3e-56 221.5 141 75.2
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 5.6e-56 221.1 142 76.8
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 5.6e-56 221.1 141 74.5
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 7.3e-56 220.7 143 75.5
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 7.3e-56 220.7 141 75.9
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 9.5e-56 220.3 141 74.5
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 1.2e-55 219.9 141 75.9
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 1.6e-55 219.5 142 77.5
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 1.6e-55 219.5 141 74.5
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 2.1e-55 219.2 185 61.1
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 2.1e-55 219.2 141 75.9
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 2.1e-55 219.2 141 75.9
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 2.8e-55 218.8 141 76.6
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 2.8e-55 218.8 143 73.4
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 4.7e-55 218.0 139 77.0
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 1.1e-54 216.9 141 71.6
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 1.8e-54 216.1 141 75.2
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 1.7e-52 209.5 133 75.9
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 6.4e-52 207.6 141 71.6
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 6.4e-52 207.6 206 56.3
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 7.1e-51 204.1 201 55.7
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 4.6e-50 201.4 145 69.0
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 7.8e-50 200.7 141 68.8
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 1.3e-49 199.9 117 83.8
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 4.3e-48 194.9 117 81.2
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 4.7e-47 191.4 125 73.6
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 4.4e-45 184.9 167 59.9
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 5.6e-40 167.9 110 75.5
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 3.4e-37 158.7 134 57.5
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 2.2e-36 156.0 146 53.4
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 4.2e-35 151.8 172 50.0
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 2.7e-34 149.1 134 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 7.9e-34 147.5 138 52.2
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 3.9e-33 145.2 125 61.6
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 8.7e-33 144.1 141 56.7
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 2.1e-23 112.8 64 84.4
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 4.8e-23 111.7 187 35.3
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 4.0e-22 108.6 139 41.7
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 2.0e-21 106.3 57 87.7
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 8.4e-20 100.9 133 38.3
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 3.3e-16 89.0 64 68.8
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 2.8e-15 85.9 136 36.0


User provided reference genes

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