Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 5.2e-99 364.4 183 100.0
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.7e-84 314.7 183 85.8
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.5e-77 292.4 183 81.4
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 8.0e-76 287.3 183 79.2
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 6.8e-75 284.3 184 76.6
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 2.0e-74 282.7 183 78.7
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 3.4e-74 282.0 183 78.7
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 3.4e-74 282.0 183 77.0
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.4e-74 281.6 184 78.3
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 3.7e-73 278.5 184 77.7
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.7e-73 278.5 184 77.2
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.7e-73 278.5 184 77.7
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.1e-72 276.9 185 77.3
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 5.4e-72 274.6 183 76.5
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 9.2e-72 273.9 183 77.6
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.0e-71 272.7 184 77.2
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.7e-71 272.3 184 78.3
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 6.0e-71 271.2 184 77.2
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.7e-70 269.6 185 76.8
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 3.9e-70 268.5 184 76.1
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 5.0e-70 268.1 185 73.5
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 6.6e-70 267.7 184 76.1
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 1.1e-69 266.9 188 76.1
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 4.3e-69 265.0 183 76.0
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 9.5e-69 263.8 182 74.2
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 9.5e-69 263.8 184 72.8
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.1e-67 260.4 184 73.4
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 5.2e-67 258.1 183 71.0
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 3.4e-66 255.4 184 73.4
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.3e-65 253.4 171 77.8
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 2.2e-65 252.7 184 71.7
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.7e-65 251.9 182 69.2
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 4.9e-65 251.5 182 69.2
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 6.4e-65 251.1 183 72.1
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 1.4e-64 250.0 183 69.9
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.4e-64 250.0 183 72.1
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 4.1e-64 248.4 183 71.6
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 5.4e-64 248.1 183 71.0
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 5.4e-64 248.1 184 70.1
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 9.2e-64 247.3 183 71.0
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 1.6e-63 246.5 183 71.0
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.6e-63 246.5 183 69.9
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 2.0e-63 246.1 183 71.0
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 2.0e-63 246.1 184 70.7
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 3.5e-63 245.4 183 68.9
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 4.6e-63 245.0 184 69.6
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 4.6e-63 245.0 186 68.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 3.0e-62 242.3 184 69.0
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 3.0e-62 242.3 183 72.7
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 5.0e-62 241.5 183 69.4
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 5.0e-62 241.5 183 71.6
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 5.0e-62 241.5 183 71.6
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 5.0e-62 241.5 183 68.9
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 5.0e-62 241.5 183 69.4
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 8.6e-62 240.7 184 69.0
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.1e-61 240.4 183 68.3
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.9e-61 239.6 184 70.7
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 2.5e-61 239.2 184 70.1
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.3e-61 238.4 183 67.8
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 4.3e-61 238.4 184 69.6
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 7.3e-61 237.7 184 65.8
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 9.5e-61 237.3 184 70.1
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 2.1e-60 236.1 153 77.8
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 4.7e-60 235.0 184 67.9
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 4.7e-60 235.0 182 68.7
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 5.2e-59 231.5 182 68.7
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 2.0e-58 229.6 173 66.5
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 9.9e-58 227.3 199 60.3
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.3e-57 226.9 147 76.9
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 2.2e-57 226.1 182 67.0
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 2.2e-57 226.1 152 74.3
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 2.2e-57 226.1 183 66.1
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 2.9e-57 225.7 185 65.9
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 2.9e-57 225.7 185 64.9
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.9e-57 224.9 148 75.0
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 8.3e-57 224.2 182 64.8
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.4e-56 222.6 183 61.7
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 3.2e-56 222.2 148 73.6
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 5.4e-56 221.5 187 65.2
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.2e-55 220.3 148 73.0
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.3e-54 216.9 114 92.1
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 3.0e-54 215.7 184 63.0
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 8.6e-54 214.2 116 87.9
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 8.6e-54 214.2 183 60.7
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.5e-53 213.4 152 67.1
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.9e-53 213.0 185 60.0
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.9e-53 213.0 144 72.2
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 3.3e-53 212.2 176 61.9
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 3.3e-53 212.2 162 66.0
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.3e-53 211.8 132 77.3
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 5.6e-53 211.5 160 65.6
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 5.6e-53 211.5 151 66.9
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 7.3e-53 211.1 115 87.8
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 9.5e-53 210.7 163 65.6
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 9.5e-53 210.7 184 59.8
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 2.8e-52 209.1 170 62.4
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 3.6e-52 208.8 176 67.0
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 4.7e-52 208.4 160 65.0
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 6.2e-52 208.0 185 57.3
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 6.2e-52 208.0 188 59.0
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 6.2e-52 208.0 185 61.6
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 8.1e-52 207.6 185 57.3
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.8e-51 206.5 185 56.8
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 5.2e-51 204.9 184 58.2
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 5.2e-51 204.9 184 58.2
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 8.9e-51 204.1 116 84.5
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.0e-50 203.0 163 65.0
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 2.6e-50 202.6 134 76.1
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 4.9e-49 198.4 177 57.6
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 8.4e-49 197.6 186 58.6
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 1.6e-47 193.4 115 80.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 2.7e-47 192.6 183 60.7
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 3.9e-46 188.7 163 58.3
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.4e-41 171.0 157 54.1
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 1.1e-40 170.6 115 72.2
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 1.2e-39 167.2 108 71.3
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.0e-39 164.9 157 52.2
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.5e-37 160.2 123 65.9
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 1.3e-33 147.1 106 61.3
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 2.2e-33 146.4 110 59.1
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 2.2e-33 146.4 109 59.6
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 4.2e-32 142.1 108 59.3
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 9.3e-32 141.0 104 72.1
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.8e-25 119.0 142 49.3
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.5e-21 107.1 69 76.8
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.5e-21 106.3 109 56.9
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 1.3e-20 104.0 59 81.4
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 1.3e-20 104.0 59 81.4
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 5.5e-16 88.6 64 68.8


User provided reference genes

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