Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.7e-83 312.0 162 100.0
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.5e-54 216.5 158 63.3
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 3.8e-53 211.8 158 68.4
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.5e-52 209.1 159 69.2
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 3.2e-52 208.8 159 69.2
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 6.1e-51 204.5 158 64.6
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 5.1e-50 201.4 158 65.2
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.5e-49 199.9 144 66.7
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.3e-49 198.7 145 64.8
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 5.7e-49 198.0 161 60.9
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.8e-48 195.7 158 62.7
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 2.8e-48 195.7 154 64.3
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.7e-48 195.3 144 65.3
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 6.3e-48 194.5 158 59.5
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.2e-48 194.1 145 64.8
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 1.1e-47 193.7 161 59.6
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 1.4e-47 193.4 160 59.4
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.8e-47 193.0 154 60.4
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 2.4e-47 192.6 141 63.1
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 4.1e-47 191.8 140 67.1
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 5.3e-47 191.4 167 57.5
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 6.9e-47 191.0 158 60.8
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 6.9e-47 191.0 160 58.8
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 6.9e-47 191.0 154 61.0
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.2e-46 190.3 143 62.9
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 2.0e-46 189.5 160 57.5
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 4.5e-46 188.3 165 56.4
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 4.5e-46 188.3 161 57.1
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 4.5e-46 188.3 160 58.1
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 7.7e-46 187.6 158 60.8
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.0e-45 187.2 153 64.1
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.3e-45 186.8 160 60.0
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 2.9e-45 185.7 159 57.9
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 5.0e-45 184.9 141 60.3
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.1e-44 183.7 158 57.6
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 1.1e-44 183.7 146 58.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 1.4e-44 183.3 161 57.1
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 2.5e-44 182.6 141 58.9
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 2.5e-44 182.6 158 60.8
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 2.5e-44 182.6 161 57.8
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 4.2e-44 181.8 158 58.2
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 7.2e-44 181.0 159 59.7
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 9.4e-44 180.6 159 59.7
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 9.4e-44 180.6 159 59.7
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 1.2e-43 180.3 159 58.5
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.6e-43 179.9 158 59.5
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.7e-43 179.1 157 57.3
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.6e-43 178.7 151 56.3
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 3.6e-43 178.7 163 55.8
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 4.6e-43 178.3 154 57.8
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 4.6e-43 178.3 152 59.9
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 6.1e-43 177.9 145 60.0
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 6.1e-43 177.9 163 52.8
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 7.9e-43 177.6 156 57.1
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.4e-42 176.8 158 58.9
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 2.3e-42 176.0 143 58.7
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 3.9e-42 175.3 163 50.9
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 3.9e-42 175.3 156 56.4
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 5.1e-42 174.9 158 55.7
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 6.7e-42 174.5 158 55.1
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 6.7e-42 174.5 154 52.6
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.5e-41 173.3 146 58.2
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 2.0e-41 172.9 153 54.9
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 4.3e-41 171.8 144 54.9
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 7.4e-41 171.0 144 58.3
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.7e-40 169.9 146 52.1
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 1.7e-40 169.9 157 54.8
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 2.2e-40 169.5 160 54.4
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 4.8e-40 168.3 146 56.2
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 4.8e-40 168.3 142 54.2
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 6.3e-40 167.9 153 54.2
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 6.3e-40 167.9 155 55.5
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 6.3e-40 167.9 158 53.2
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.8e-39 166.4 148 51.4
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 2.4e-39 166.0 137 56.2
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 3.1e-39 165.6 158 51.3
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 4.1e-39 165.2 158 54.4
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 4.1e-39 165.2 158 51.9
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 5.3e-39 164.9 155 53.5
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 6.9e-39 164.5 138 57.2
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 6.9e-39 164.5 151 51.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 1.2e-38 163.7 158 51.9
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 1.2e-38 163.7 162 51.2
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 2.6e-38 162.5 128 62.5
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 3.4e-38 162.2 150 56.0
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 3.4e-38 162.2 158 52.5
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 3.4e-38 162.2 159 54.1
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 4.5e-38 161.8 155 54.8
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 7.7e-38 161.0 158 51.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 7.7e-38 161.0 158 51.9
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.0e-37 160.6 158 51.3
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.2e-37 159.5 158 50.6
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 6.5e-37 157.9 170 48.8
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.1e-36 157.1 140 53.6
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.9e-36 156.4 158 51.3
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 2.5e-36 156.0 141 54.6
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 3.2e-36 155.6 156 50.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 4.2e-36 155.2 143 53.8
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 9.4e-36 154.1 158 50.0
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 3.0e-34 149.1 136 52.9
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 1.7e-32 143.3 128 57.0
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 6.3e-32 141.4 111 60.4
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 1.1e-31 140.6 132 50.8
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 4.1e-31 138.7 127 55.9
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 4.1e-31 138.7 138 53.6
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.2e-30 137.1 114 62.3
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 1.2e-30 137.1 147 48.3
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 7.7e-30 134.4 115 59.1
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 8.5e-29 131.0 139 48.2
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.6e-27 126.7 158 41.1
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 6.1e-27 124.8 148 41.2
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 6.7e-26 121.3 135 40.7
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 3.3e-25 119.0 148 44.6
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 1.1e-20 104.0 105 49.5
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 3.6e-19 99.0 77 58.4
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 3.6e-19 99.0 149 38.9
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 1.4e-18 97.1 127 39.4
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.4e-18 97.1 132 40.9
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 4.0e-18 95.5 142 36.6
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 4.4e-17 92.0 90 52.2
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.4e-15 87.0 189 31.2
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 1.8e-15 86.7 89 48.3
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.5e-14 82.4 152 33.6
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 6.5e-13 78.2 138 34.1
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 3.2e-12 75.9 79 51.9
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.1e-11 73.2 64 56.2
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 2.0e-09 66.6 90 44.4
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 4.4e-09 65.5 88 40.9
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 4.4e-09 65.5 76 46.1
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 3.1e-07 59.3 41 63.4


User provided reference genes

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