Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.8e-90 335.9 168 100.0
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 2.8e-67 258.8 163 78.5
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 7.2e-63 244.2 165 77.6
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.1e-62 242.7 163 72.4
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.3e-61 240.0 171 74.9
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 3.9e-61 238.4 165 73.3
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.5e-60 236.5 160 72.5
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.2e-59 232.6 174 67.8
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 6.3e-59 231.1 160 71.9
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 8.2e-59 230.7 164 69.5
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 3.1e-58 228.8 164 69.5
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.6e-57 225.7 169 70.4
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 4.5e-57 224.9 164 69.5
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 4.5e-57 224.9 161 69.6
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 2.2e-56 222.6 162 69.8
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.9e-56 222.2 162 67.9
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 3.8e-56 221.9 175 65.1
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 3.8e-56 221.9 159 71.7
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 8.5e-56 220.7 160 69.4
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 5.5e-55 218.0 159 68.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 7.2e-55 217.6 169 65.1
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 9.4e-55 217.2 160 65.6
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.6e-54 216.5 160 68.8
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.6e-54 216.5 170 67.1
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 4.6e-54 214.9 161 66.5
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.8e-53 213.0 159 68.6
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.8e-53 213.0 168 64.9
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.8e-53 213.0 159 67.9
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 3.9e-53 211.8 160 63.8
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 8.8e-53 210.7 159 63.5
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 9.7e-52 207.2 161 64.0
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.3e-51 206.8 201 57.2
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 4.8e-51 204.9 161 64.6
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 8.2e-51 204.1 161 64.6
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.8e-50 203.0 172 62.2
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 6.9e-50 201.1 171 60.8
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.5e-49 199.9 169 61.5
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.6e-49 199.1 167 62.9
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 7.7e-49 197.6 165 63.6
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.0e-48 197.2 159 64.8
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 2.2e-48 196.1 160 63.1
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.8e-48 195.3 152 61.8
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 6.5e-48 194.5 159 63.5
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 6.5e-48 194.5 158 62.0
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 6.5e-48 194.5 159 63.5
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.4e-47 193.4 160 62.5
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 3.6e-46 188.7 159 62.9
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 3.6e-46 188.7 157 63.7
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 6.1e-46 188.0 168 60.7
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 2.3e-45 186.0 156 66.7
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 3.3e-44 182.2 162 59.3
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 3.3e-44 182.2 160 58.8
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 5.7e-44 181.4 174 58.6
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 5.7e-44 181.4 173 59.0
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.2e-43 179.5 167 55.7
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.8e-43 179.1 193 50.8
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.8e-43 179.1 172 57.6
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.8e-42 176.4 172 55.8
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 7.0e-42 174.5 161 58.4
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 1.2e-41 173.7 161 58.4
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 1.2e-41 173.7 161 58.4
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.2e-41 173.7 169 53.8
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.6e-41 173.3 160 59.4
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.6e-41 173.3 151 62.3
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.6e-41 172.6 161 57.8
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.6e-41 172.6 161 57.8
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.6e-41 172.6 159 57.9
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 3.5e-41 172.2 151 58.3
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.0e-40 170.6 153 58.8
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.3e-40 170.2 166 55.4
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.2e-40 169.5 160 53.1
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 2.9e-40 169.1 159 56.0
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 6.5e-40 167.9 129 62.8
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.1e-39 167.2 159 54.7
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 4.2e-39 165.2 152 56.6
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 4.2e-39 165.2 158 55.1
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.2e-38 163.7 166 51.2
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.6e-38 163.3 149 59.1
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 4.7e-38 161.8 152 55.3
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 6.1e-38 161.4 158 54.4
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.5e-36 156.8 159 52.2
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.2e-35 152.9 157 51.6
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 3.7e-35 152.1 163 50.9
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 6.3e-35 151.4 140 53.6
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.0e-33 146.4 116 64.7
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 7.7e-33 144.4 137 55.5
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 5.0e-32 141.7 157 45.9
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 8.5e-32 141.0 157 45.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.1e-31 140.6 157 47.1
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.1e-31 140.6 156 46.8
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 9.4e-31 137.5 109 62.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 1.0e-29 134.0 154 45.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.7e-25 119.4 85 72.9
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 2.9e-24 115.9 129 44.2
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.2e-22 110.5 109 50.5
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 8.0e-22 107.8 82 65.9
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.5e-20 103.6 118 49.2
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.4e-20 102.1 115 52.2
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 2.8e-19 99.4 89 60.7
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 2.8e-19 99.4 97 52.6
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 5.7e-12 75.1 48 72.9
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 4.9e-11 72.0 55 60.0
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 6.6e-08 61.6 36 77.8


User provided reference genes

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