Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 9.5e-29 129.4 62 100.0
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 4.0e-19 97.4 51 92.2
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 4.4e-18 94.0 67 74.6
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 9.8e-18 92.8 52 88.5
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.3e-17 92.4 66 74.2
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 1.7e-17 92.0 66 72.7
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 2.2e-17 91.7 66 72.7
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 2.2e-17 91.7 51 84.3
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 2.2e-17 91.7 67 68.7
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 2.2e-17 91.7 66 72.7
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 2.2e-17 91.7 66 72.7
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 2.9e-17 91.3 62 72.6
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 2.9e-17 91.3 64 75.0
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 2.9e-17 91.3 64 75.0
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.9e-17 91.3 50 86.0
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 3.7e-17 90.9 66 72.7
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 3.7e-17 90.9 66 72.7
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 3.7e-17 90.9 51 86.3
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 4.9e-17 90.5 49 87.8
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 4.9e-17 90.5 52 82.7
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 6.4e-17 90.1 51 82.4
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 8.3e-17 89.7 52 84.6
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.1e-16 89.4 51 82.4
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.1e-16 89.4 51 82.4
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.1e-16 89.4 52 80.8
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 1.1e-16 89.4 52 84.6
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 1.1e-16 89.4 52 84.6
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.1e-16 89.4 66 68.2
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.1e-16 89.4 60 73.3
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.1e-16 89.4 49 85.7
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 1.1e-16 89.4 63 71.4
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.4e-16 89.0 48 89.6
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.4e-16 89.0 52 78.8
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.4e-16 89.0 50 86.0
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.4e-16 89.0 52 82.7
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 1.9e-16 88.6 58 75.9
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.9e-16 88.6 66 69.7
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.9e-16 88.6 51 82.4
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.4e-16 88.2 51 82.4
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 2.4e-16 88.2 52 78.8
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.4e-16 88.2 52 78.8
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-16 88.2 51 82.4
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.4e-16 88.2 66 68.2
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 3.2e-16 87.8 51 80.4
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 4.1e-16 87.4 52 76.9
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 4.1e-16 87.4 51 84.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 4.1e-16 87.4 51 84.3
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 5.4e-16 87.0 51 78.4
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 5.4e-16 87.0 51 78.4
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 5.4e-16 87.0 51 78.4
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 5.4e-16 87.0 51 78.4
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 5.4e-16 87.0 51 78.4
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 5.4e-16 87.0 51 78.4
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 5.4e-16 87.0 52 82.7
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 5.4e-16 87.0 52 76.9
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 5.4e-16 87.0 48 85.4
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 7.0e-16 86.7 51 78.4
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 7.0e-16 86.7 62 72.6
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 7.0e-16 86.7 51 84.3
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 9.2e-16 86.3 66 68.2
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 9.2e-16 86.3 62 71.0
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.2e-15 85.9 51 80.4
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.2e-15 85.9 52 82.7
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 1.2e-15 85.9 49 79.6
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 1.6e-15 85.5 51 76.5
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.6e-15 85.5 66 66.7
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.6e-15 85.5 47 85.1
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.6e-15 85.5 60 71.7
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 2.0e-15 85.1 47 85.1
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.0e-15 85.1 51 76.5
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 2.7e-15 84.7 51 76.5
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 3.5e-15 84.3 51 76.5
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 3.5e-15 84.3 67 64.2
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.5e-15 84.3 62 69.4
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 4.6e-15 84.0 51 76.5
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 4.6e-15 84.0 51 76.5
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 4.6e-15 84.0 51 76.5
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 4.6e-15 84.0 51 76.5
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 4.6e-15 84.0 47 83.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 4.6e-15 84.0 52 76.9
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 4.6e-15 84.0 52 78.8
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 6.0e-15 83.6 51 74.5
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 6.0e-15 83.6 46 84.8
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 6.0e-15 83.6 66 65.2
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 6.0e-15 83.6 48 77.1
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 7.8e-15 83.2 52 73.1
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 7.8e-15 83.2 63 65.1
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 7.8e-15 83.2 62 71.0
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 7.8e-15 83.2 67 64.2
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.3e-14 82.4 61 70.5
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 1.3e-14 82.4 62 67.7
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.7e-14 82.0 63 68.3
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.3e-14 81.6 61 67.2
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 3.0e-14 81.3 60 63.3
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.9e-14 80.9 51 76.5
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 5.0e-14 80.5 48 72.9
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.0e-14 80.5 47 78.7
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 6.6e-14 80.1 55 72.7
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 6.6e-14 80.1 51 74.5
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 2.5e-13 78.2 51 70.6
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.5e-13 78.2 48 70.8
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 3.3e-13 77.8 48 68.8
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 4.7e-12 73.9 47 72.3
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 6.2e-12 73.6 100 47.0
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 1.1e-11 72.8 53 69.8
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.8e-11 72.0 47 74.5
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 9.8e-10 66.2 47 66.0
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.9e-09 64.7 58 55.2
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 3.7e-09 64.3 51 60.8
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 1.4e-08 62.4 42 76.2
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.4e-08 61.6 46 73.9
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 5.4e-08 60.5 33 84.8
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.6e-07 58.9 31 87.1
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.6e-07 58.9 31 87.1
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.1e-07 58.5 47 63.8
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.1e-07 58.5 47 63.8
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 3.5e-07 57.8 46 67.4
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 4.6e-07 57.4 41 68.3
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.7e-06 55.5 46 67.4
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 6.6e-06 53.5 33 66.7


User provided reference genes

Program Settings