Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 3.0e-90 335.1 164 100.0
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 3.0e-37 159.1 166 58.4
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 9.9e-25 117.5 168 47.6
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 2.4e-23 112.8 153 48.4
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 1.6e-22 110.2 165 42.4
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 3.9e-21 105.5 170 41.8
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 3.3e-20 102.4 154 45.5
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 4.3e-20 102.1 175 43.4
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 1.6e-19 100.1 176 42.6
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 4.7e-19 98.6 137 47.4
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 8.1e-19 97.8 157 41.4
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 8.1e-19 97.8 157 42.0
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 1.1e-18 97.4 159 40.9
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 1.4e-18 97.1 199 37.2
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 2.4e-18 96.3 157 42.0
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 3.1e-18 95.9 169 44.4
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 6.8e-18 94.7 160 43.1
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 4.4e-17 92.0 155 39.4
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 5.8e-17 91.7 166 42.2
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 5.8e-17 91.7 175 42.9
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 3.8e-16 89.0 181 39.2
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 4.9e-16 88.6 155 41.9
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 4.9e-16 88.6 163 38.7
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 4.9e-16 88.6 181 39.8
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.9e-15 86.7 180 40.6
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 2.4e-15 86.3 171 38.6
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 2.4e-15 86.3 180 40.6
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.4e-15 86.3 183 39.9
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 2.4e-15 86.3 161 39.8
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 3.2e-15 85.9 165 40.6
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 3.2e-15 85.9 183 39.9
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 7.1e-15 84.7 152 38.8
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 7.1e-15 84.7 163 38.7
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 2.1e-14 83.2 177 33.9
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 2.1e-14 83.2 148 39.9
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 2.1e-14 83.2 159 39.0
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 2.1e-14 83.2 163 39.3
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 3.5e-14 82.4 153 41.2
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 3.5e-14 82.4 158 38.0
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 6.0e-14 81.6 173 39.3
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 7.8e-14 81.3 174 37.4
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 1.3e-13 80.5 144 38.2
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 1.7e-13 80.1 167 34.7
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.3e-13 79.7 174 37.9
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 3.9e-13 79.0 148 36.5
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 5.1e-13 78.6 146 35.6
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 6.6e-13 78.2 174 36.2
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 8.7e-13 77.8 161 36.6
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 1.1e-12 77.4 168 39.9
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 1.1e-12 77.4 173 38.2
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 1.1e-12 77.4 146 37.7
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 1.1e-12 77.4 162 35.8
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 2.5e-12 76.3 163 36.2
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 2.5e-12 76.3 151 35.1
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 2.5e-12 76.3 164 37.8
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 2.5e-12 76.3 191 34.0
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 4.3e-12 75.5 157 34.4
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 5.6e-12 75.1 149 37.6
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.6e-11 73.6 147 36.7
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 2.1e-11 73.2 75 57.3
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 2.8e-11 72.8 180 35.6
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 3.6e-11 72.4 141 37.6
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 6.2e-11 71.6 153 37.3
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.1e-10 70.9 145 35.9
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.4e-10 70.5 142 38.0
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 1.4e-10 70.5 100 44.0
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 1.4e-10 70.5 138 34.8
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 1.4e-10 70.5 166 36.7
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 1.8e-10 70.1 142 39.4
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 6.9e-10 68.2 171 38.0
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 6.9e-10 68.2 145 36.6
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 6.9e-10 68.2 142 38.7
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 9.0e-10 67.8 145 36.6
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 4.4e-09 65.5 74 50.0
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 9.9e-09 64.3 111 37.8
CAN.G1166.17 Capsicum annuum HOM05D001841 ORTHO05D001767 3.8e-08 62.4 127 35.4
vmacro19487 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 3.8e-08 62.4 164 33.5
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 4.9e-08 62.0 148 36.5
AUR62016627 Chenopodium quinoa HOM05D001841 ORTHO05D001767 1.1e-07 60.8 159 30.8
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 1.1e-07 60.8 141 34.0
PGR142G1787 Punica granatum HOM05D001841 ORTHO05D001767 1.1e-07 60.8 179 34.1
MSTRG.20139 Avicennia marina HOM05D001841 ORTHO05D001767 1.4e-07 60.5 168 31.5
SHI19885 Sapria himalayana HOM05D003270 ORTHO05D003662 1.4e-07 60.5 109 36.7
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 1.9e-07 60.1 148 35.8
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 4.2e-07 58.9 151 36.4
Thhalv10022784m.g Eutrema salsugineum HOM05D001841 ORTHO05D001767 5.4e-07 58.5 117 36.8
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 5.4e-07 58.5 132 36.4
Nitab4.5_0001413g0010 Nicotiana tabacum HOM05D001841 ORTHO05D001767 5.4e-07 58.5 123 35.8
Lsat_1_v5_gn_5_113300 Lactuca sativa HOM05D001841 ORTHO05D001767 7.1e-07 58.2 146 32.9
Oeu007260.1 Olea europaea HOM05D001841 ORTHO05D001767 9.3e-07 57.8 161 32.3
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 2.1e-06 56.6 149 32.9
SEGI_11594 Sequoiadendron giganteum HOM05D003270 ORTHO05D003662 2.1e-06 56.6 135 32.6
ATR0097G009 Amborella trichopoda HOM05D001841 ORTHO05D001767 2.7e-06 56.2 186 30.6
MSTRG.16762 Avicennia marina HOM05D001841 ORTHO05D001767 2.7e-06 56.2 160 31.9
PGSC0003DMG400018102 Solanum tuberosum HOM05D001841 ORTHO05D001767 2.7e-06 56.2 170 31.2
Pp3c23_5150 Physcomitrium patens HOM05D016149 ORTHO05D018358 3.5e-06 55.8 170 28.2
BcaB03g16318 Brassica carinata HOM05D001841 ORTHO05D001767 4.6e-06 55.5 113 36.3
AUR62011434 Chenopodium quinoa HOM05D001841 ORTHO05D001767 4.6e-06 55.5 160 29.4
HanXRQChr11g0324211 Helianthus annuus HOM05D001841 ORTHO05D001767 6.0e-06 55.1 156 32.7
AL3G47510 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 7.8e-06 54.7 110 34.5


User provided reference genes

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