Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0239 Trochodendron aralioides HOM05D002759 ORTHO05D021026 4.5e-68 261.2 133 100.0
TAR629G0124 Trochodendron aralioides HOM05D002759 ORTHO05D021026 3.4e-52 208.4 109 97.2
TAR628G0627 Trochodendron aralioides HOM05D002759 ORTHO05D021026 5.0e-35 151.4 80 95.0
TAR628G1230 Trochodendron aralioides HOM05D002759 ORTHO05D021026 1.5e-34 149.8 80 93.8
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 1.5e-23 113.2 71 80.3
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 5.6e-10 68.2 69 52.2
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 7.3e-10 67.8 113 45.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 2.1e-09 66.2 75 50.7
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 2.8e-09 65.9 59 52.5
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 3.6e-09 65.5 73 47.9
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 6.1e-09 64.7 115 37.4
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 3.1e-08 62.4 75 49.3
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 4.0e-08 62.0 61 47.5
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 4.0e-08 62.0 61 47.5
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 5.2e-08 61.6 74 44.6
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 6.8e-08 61.2 69 43.5
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 8.9e-08 60.8 93 39.8
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.2e-07 60.5 75 45.3
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.2e-07 60.5 119 37.8
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 1.5e-07 60.1 69 46.4
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 2.0e-07 59.7 68 44.1
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 3.4e-07 58.9 63 49.2
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 7.5e-07 57.8 63 47.6
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 7.5e-07 57.8 73 41.1
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 9.8e-07 57.4 71 42.3
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 1.3e-06 57.0 69 44.9
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 2.2e-06 56.2 86 38.4
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 2.9e-06 55.8 112 35.7
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 2.9e-06 55.8 75 41.3
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 2.9e-06 55.8 77 37.7
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 3.7e-06 55.5 125 32.8
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 3.7e-06 55.5 125 32.8
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 3.7e-06 55.5 71 42.3
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 4.9e-06 55.1 112 33.9
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 6.4e-06 54.7 63 49.2
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 6.4e-06 54.7 71 49.3
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 8.3e-06 54.3 72 43.1
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 8.3e-06 54.3 74 48.6


User provided reference genes

Program Settings