Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0170 Trochodendron aralioides HOM05D005436 ORTHO05D006215 6.7e-50 201.1 163 100.0
TAR371G0328 Trochodendron aralioides HOM05D005436 ORTHO05D006215 5.9e-22 108.2 149 82.6
TAR633G1814 Trochodendron aralioides HOM05D005436 ORTHO05D006215 2.9e-21 105.9 126 88.9
TAR629G0589 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.1e-20 104.0 122 91.0
TAR629G3419 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.1e-20 104.0 122 91.0
Lj3A1057T77 Lonicera japonica HOM05D005436 ORTHO05D006215 1.8e-18 96.7 122 90.2
TAR371G0429 Trochodendron aralioides HOM05D044080 ORTHO05D006215 1.8e-18 96.7 126 69.0
PSO832G1925 Papaver somniferum HOM05D005436 ORTHO05D006215 4.0e-18 95.5 134 80.6
CSS0002796 Camellia sinensis var. sinensis HOM05D005436 ORTHO05D006215 1.2e-17 94.0 135 83.0
Manes.13G025400 Manihot esculenta HOM05D005436 ORTHO05D006215 1.2e-17 94.0 122 87.7
QL03p058434 Quercus lobata HOM05D005436 ORTHO05D006215 1.5e-17 93.6 122 88.5
Cfa009203 Carpinus fangiana HOM05D005436 ORTHO05D006215 2.6e-17 92.8 135 83.0
Potri.010G045300 Populus trichocarpa HOM05D005436 ORTHO05D006215 5.8e-17 91.7 122 86.9
Ciclev10032010m.g Citrus clementina HOM05D005436 ORTHO05D006215 1.7e-16 90.1 122 84.4
Atru.chr11.2113 Acer truncatum HOM05D005436 ORTHO05D006215 2.9e-16 89.4 122 86.9
Atru.chr11.2128 Acer truncatum HOM05D005436 ORTHO05D006215 2.9e-16 89.4 122 86.9
Rhsim12G0040900 Rhododendron simsii HOM05D005436 ORTHO05D006215 3.7e-16 89.0 134 81.3
SGA_v2.0_scaffold87G27081 Striga asiatica HOM05D005436 ORTHO05D006215 3.7e-16 89.0 122 83.6
Gohir.D01G151000 Gossypium hirsutum HOM05D005436 ORTHO05D006215 1.1e-15 87.4 135 80.7
Gorai.002G187200 Gossypium raimondii HOM05D005436 ORTHO05D006215 1.1e-15 87.4 135 80.7
Lsat_1_v5_gn_8_150780 Lactuca sativa HOM05D005436 ORTHO05D006215 1.4e-15 87.0 121 86.8
Manes.12G023900 Manihot esculenta HOM05D005436 ORTHO05D006215 1.4e-15 87.0 122 85.2
Migut.L01484 Erythranthe guttata HOM05D005436 ORTHO05D006215 1.9e-15 86.7 122 83.6
GSVIVG01004082001 Vitis vinifera HOM05D005436 ORTHO05D006215 1.9e-15 86.7 121 85.1
Aqoxy5G03784 Aquilegia oxysepala HOM05D005436 ORTHO05D006215 3.2e-15 85.9 122 86.1
HanXRQChr08g0208111 Helianthus annuus HOM05D005436 ORTHO05D006215 4.1e-15 85.5 121 86.8
Actinidia27803 Actinidia chinensis HOM05D005436 ORTHO05D006215 5.4e-15 85.1 125 82.4
CiPaw.05G183100 Carya illinoinensis HOM05D005436 ORTHO05D006215 9.2e-15 84.3 135 80.0
COL.COLO4_24251 Corchorus olitorius HOM05D005436 ORTHO05D006215 9.2e-15 84.3 135 80.7
Duzib251G0682 Durio zibethinus HOM05D005436 ORTHO05D006215 9.2e-15 84.3 135 80.7
Gohir.A01G159300 Gossypium hirsutum HOM05D005436 ORTHO05D006215 1.2e-14 84.0 135 81.5
Prupe.1G243200 Prunus persica HOM05D005436 ORTHO05D006215 1.2e-14 84.0 135 80.7
Lalb_Chr09g0326141 Lupinus albus HOM05D005436 ORTHO05D006215 1.6e-14 83.6 122 80.3
Sc14g0008720 Simmondsia chinensis HOM05D005436 ORTHO05D006215 2.0e-14 83.2 122 85.2
Hund25385 Selenicereus undatus HOM05D005436 ORTHO05D006215 2.7e-14 82.8 122 85.2
Lalb_Chr16g0381971 Lupinus albus HOM05D005436 ORTHO05D006215 3.5e-14 82.4 122 82.0
MSTRG.2420 Avicennia marina HOM05D005436 ORTHO05D006215 4.6e-14 82.0 135 77.8
TAR314G0002 Trochodendron aralioides HOM05D005436 ORTHO05D006215 6.0e-14 81.6 41 90.2
Cc11_g15600 Coffea canephora HOM05D005436 ORTHO05D006215 7.8e-14 81.3 121 81.8
Migut.E00197 Erythranthe guttata HOM05D005436 ORTHO05D006215 7.8e-14 81.3 125 81.6
Nitab4.5_0000740g0060 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.0e-13 80.9 125 79.2
AUR62024292 Chenopodium quinoa HOM05D005436 ORTHO05D006215 1.3e-13 80.5 135 77.8
FAN22G0693 Fragaria x ananassa HOM05D005436 ORTHO05D006215 1.3e-13 80.5 122 83.6
Nitab4.5_0002631g0010 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.3e-13 80.5 125 80.8
Sabra10G0023000 Salix brachista HOM05D005436 ORTHO05D006215 1.3e-13 80.5 122 81.1
MSTRG.7922 Avicennia marina HOM05D005436 ORTHO05D006215 1.7e-13 80.1 135 77.0
AUR62005449 Chenopodium quinoa HOM05D005436 ORTHO05D006215 1.7e-13 80.1 135 77.8
Eucgr.H02509 Eucalyptus grandis HOM05D005436 ORTHO05D006215 2.3e-13 79.7 122 82.0
Nitab4.5_0000069g0320 Nicotiana tabacum HOM05D005436 ORTHO05D006215 2.3e-13 79.7 125 78.4
PGR119G1276 Punica granatum HOM05D005436 ORTHO05D006215 2.3e-13 79.7 122 84.4
TAR371G0549 Trochodendron aralioides HOM05D005436 ORTHO05D006215 2.3e-13 79.7 42 85.7
EL10Ac6g13796 Beta vulgaris HOM05D005436 ORTHO05D006215 3.0e-13 79.3 135 77.0
Actinidia08140 Actinidia chinensis HOM05D005436 ORTHO05D006215 5.0e-13 78.6 117 84.6
Peaxi162Scf00128g00005 Petunia axillaris HOM05D005436 ORTHO05D006215 5.0e-13 78.6 119 81.5
Sopen05g008220 Solanum pennellii HOM05D005436 ORTHO05D006215 5.0e-13 78.6 122 79.5
CANSAT01G1386 Cannabis sativa HOM05D005436 ORTHO05D006215 6.6e-13 78.2 123 62.6
Ca_04576_v3 Cicer arietinum L. HOM05D005436 ORTHO05D006215 6.6e-13 78.2 122 79.5
Glyma.01G026500 Glycine max HOM05D005436 ORTHO05D006215 6.6e-13 78.2 123 71.5
Gohir.A05G312700 Gossypium hirsutum HOM05D005436 ORTHO05D006215 8.6e-13 77.8 135 78.5
Gorai.009G335800 Gossypium raimondii HOM05D005436 ORTHO05D006215 8.6e-13 77.8 135 78.5
FAN07G0404 Fragaria x ananassa HOM05D005436 ORTHO05D006215 1.1e-12 77.4 122 82.8
PGSC0003DMG400018621 Solanum tuberosum HOM05D005436 ORTHO05D006215 1.1e-12 77.4 122 82.0
Thecc.02G258400 Theobroma cacao HOM05D005436 ORTHO05D006215 1.1e-12 77.4 135 77.8
CAN.G227.4 Capsicum annuum HOM05D005436 ORTHO05D006215 1.5e-12 77.0 119 82.4
VMungo1215G1754 Vigna mungo HOM05D005436 ORTHO05D006215 1.5e-12 77.0 123 69.9
FvH4_4g25470 Fragaria vesca HOM05D005436 ORTHO05D006215 1.9e-12 76.6 122 82.8
Thhalv10018848m.g Eutrema salsugineum HOM05D005436 ORTHO05D006215 2.5e-12 76.3 121 83.5
CARHR063810 Cardamine hirsuta HOM05D005436 ORTHO05D006215 3.3e-12 75.9 121 81.8
Medtr5g033210 Medicago truncatula HOM05D005436 ORTHO05D006215 3.3e-12 75.9 121 78.5
SHI17740 Sapria himalayana HOM05D005436 ORTHO05D006215 4.3e-12 75.5 122 79.5
Sp5g25750 Schrenkiella parvula HOM05D005436 ORTHO05D006215 4.3e-12 75.5 121 81.0
AL2G30010 Arabidopsis lyrata HOM05D005436 ORTHO05D006215 5.6e-12 75.1 121 81.8
Carub.0002s1732 Capsella rubella HOM05D005436 ORTHO05D006215 7.3e-12 74.7 119 83.2
MD13G1102600 Malus domestica HOM05D005436 ORTHO05D006215 7.3e-12 74.7 122 82.0
Nitab4.5_0004301g0010 Nicotiana tabacum HOM05D005436 ORTHO05D006215 7.3e-12 74.7 125 78.4
RcHm_v2.0_Chr4g0432791 Rosa chinensis HOM05D005436 ORTHO05D006215 7.3e-12 74.7 122 83.6
Solyc05g013410.3 Solanum lycopersicum HOM05D005436 ORTHO05D006215 7.3e-12 74.7 122 78.7
AT1G70590 Arabidopsis thaliana HOM05D005436 ORTHO05D006215 9.5e-12 74.3 121 83.5
CsaV3_2G024910 Cucumis sativus L. HOM05D005436 ORTHO05D006215 9.5e-12 74.3 120 83.3
FAN17G0814 Fragaria x ananassa HOM05D005436 ORTHO05D006215 9.5e-12 74.3 122 82.0
Phvul.002G150600 Phaseolus vulgaris HOM05D005436 ORTHO05D006215 9.5e-12 74.3 123 65.0
vmacro01128 Vaccinium macrocarpon HOM05D005436 ORTHO05D006215 9.5e-12 74.3 138 74.6
ClCG08G017720 Citrullus lanatus HOM05D005436 ORTHO05D006215 1.2e-11 73.9 120 83.3
A07p37030 Brassica napus HOM05D005436 ORTHO05D006215 2.1e-11 73.2 121 80.2
BraA07t31265Z Brassica rapa HOM05D005436 ORTHO05D006215 2.1e-11 73.2 121 80.2
Lj2g0004338 Lotus japonicus HOM05D005436 ORTHO05D006215 2.1e-11 73.2 122 79.5
Ah.03g133110 Amaranthus hybridus HOM05D005436 ORTHO05D006215 2.8e-11 72.8 122 82.0
ECA233G4095 Erigeron canadensis HOM05D005436 ORTHO05D006215 6.2e-11 71.6 124 76.6
ATR0686G177 Amborella trichopoda HOM05D005436 ORTHO05D006215 1.4e-10 70.5 122 77.9
Cpa.g.sc33.9 Carica papaya HOM05D005436 ORTHO05D006215 1.4e-10 70.5 122 74.6
TWI36G0572 Tripterygium wilfordii HOM05D005436 ORTHO05D006215 1.4e-10 70.5 122 80.3
C06p44590 Brassica napus HOM05D005436 ORTHO05D006215 1.8e-10 70.1 121 79.3
CDE07G1825 Ceratophyllum demersum HOM05D005436 ORTHO05D006215 1.8e-10 70.1 121 77.7
Oeu001711.1 Olea europaea HOM05D005436 ORTHO05D006215 1.8e-10 70.1 122 81.1
THA.LOC104822162 Tarenaya hassleriana HOM05D005436 ORTHO05D006215 1.8e-10 70.1 121 80.2
arahy.Tifrunner.gnm1.ann1.9TCE4B Arachis hypogaea HOM05D005436 ORTHO05D006215 3.1e-10 69.3 122 77.9
Haze_12240 Corylus avellana HOM05D005436 ORTHO05D006215 3.1e-10 69.3 55 67.3
SEGI_41390 Sequoiadendron giganteum HOM05D005436 ORTHO05D006215 3.1e-10 69.3 122 76.2
BolC6t39523H Brassica oleracea HOM05D005436 ORTHO05D006215 4.0e-10 68.9 121 79.3
Glyma.02G038300 Glycine max HOM05D005436 ORTHO05D006215 4.0e-10 68.9 123 59.3
Nn4g22635 Nelumbo nucifera HOM05D005436 ORTHO05D006215 4.0e-10 68.9 40 77.5
DCAR_024434 Daucus carota HOM05D005436 ORTHO05D006215 5.2e-10 68.6 121 79.3
arahy.Tifrunner.gnm1.ann1.RINP63 Arachis hypogaea HOM05D005436 ORTHO05D006215 6.8e-10 68.2 121 77.7
unitig_744.g24291 Utricularia gibba HOM05D005436 ORTHO05D006215 1.2e-09 67.4 119 72.3
CAN.G282.54 Capsicum annuum HOM05D005436 ORTHO05D006215 2.6e-09 66.2 125 76.0
Sed0020021 Sechium edule HOM05D005436 ORTHO05D006215 2.6e-09 66.2 122 54.1
Sopen01g003470 Solanum pennellii HOM05D005436 ORTHO05D006215 4.4e-09 65.5 124 74.2
PGSC0003DMG400016374 Solanum tuberosum HOM05D005436 ORTHO05D006215 4.4e-09 65.5 124 75.8
Dinv15239 Davidia involucrata HOM05D005436 ORTHO05D006215 5.8e-09 65.1 42 69.0
Solyc01g007930.4 Solanum lycopersicum HOM05D005436 ORTHO05D006215 7.5e-09 64.7 124 75.0
FAN12G3651 Fragaria x ananassa HOM05D005436 ORTHO05D006215 9.8e-09 64.3 42 71.4
Aa31LG4G10370 Aethionema arabicum HOM05D005436 ORTHO05D006215 3.7e-08 62.4 122 77.0
Pp3c16_22820 Physcomitrium patens HOM05D005436 ORTHO05D006215 3.7e-08 62.4 116 79.3
MELO3C010688.2 Cucumis melo HOM05D005436 ORTHO05D006215 4.9e-08 62.0 141 33.3
Potri.008G187200 Populus trichocarpa HOM05D005436 ORTHO05D006215 1.9e-07 60.1 35 74.3
RcHm_v2.0_Chr2g0120671 Rosa chinensis HOM05D009478 ORTHO05D010213 4.1e-07 58.9 40 67.5
Gohir.D05G314200 Gossypium hirsutum HOM05D005436 ORTHO05D006215 5.4e-07 58.5 55 58.2
TPR.G38771 Trifolium pratense HOM05D005436 ORTHO05D006215 5.4e-07 58.5 42 57.1
BcaB03g14825 Brassica carinata HOM05D005436 ORTHO05D006215 1.6e-06 57.0 55 54.5
FAN04G3213 Fragaria x ananassa HOM05D036052 ORTHO05D006215 2.7e-06 56.2 36 75.0
FAN09G1413 Fragaria x ananassa HOM05D036052 ORTHO05D006215 2.7e-06 56.2 36 75.0


User provided reference genes

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