Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.8e-279 965.3 510 100.0
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.1e-268 929.5 510 95.1
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 91.4
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 3.1e-258 894.8 510 91.2
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 4.0e-258 894.4 510 90.8
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 5.2e-258 894.0 510 91.6
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 90.4
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 91.0
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.6e-257 891.7 512 90.8
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 90.0
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 4.4e-257 891.0 511 89.8
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.2e-256 888.6 510 90.4
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 2.9e-256 888.3 510 90.2
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 6.4e-256 887.1 510 90.0
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 1.4e-255 885.9 510 90.2
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 1.4e-255 885.9 510 90.2
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.4e-255 885.9 510 90.4
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 3.2e-255 884.8 510 89.2
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 3.2e-255 884.8 510 90.0
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 90.0
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 7.1e-255 883.6 510 90.4
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.2e-254 882.9 510 90.2
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 1.6e-254 882.5 511 89.8
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 2.1e-254 882.1 510 89.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 2.7e-254 881.7 510 88.8
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 2.7e-254 881.7 510 88.6
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 2.7e-254 881.7 511 90.0
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 3.5e-254 881.3 511 89.4
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 3.5e-254 881.3 510 88.8
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 4.6e-254 880.9 510 88.6
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 6.0e-254 880.6 511 89.6
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.0e-253 879.8 511 89.4
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 1.7e-253 879.0 510 88.8
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 3.9e-253 877.9 510 88.0
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 3.9e-253 877.9 510 88.4
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 6.6e-253 877.1 511 89.4
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 8.6e-253 876.7 510 88.4
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.1e-252 876.3 510 88.0
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 88.4
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 88.8
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 3.3e-252 874.8 511 89.2
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.2
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 7.3e-252 873.6 510 88.4
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 1.6e-251 872.5 510 86.5
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.8e-251 871.7 510 88.0
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 3.6e-251 871.3 510 86.5
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.4e-250 869.4 510 87.8
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.4e-250 869.4 510 87.8
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.4e-250 869.4 510 88.0
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 1.8e-250 869.0 509 87.8
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 3.1e-250 868.2 510 86.3
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 4.0e-250 867.8 510 85.9
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.0e-250 867.8 510 87.8
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 86.1
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 86.5
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 86.1
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 2.0e-249 865.5 511 87.5
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.0e-249 865.5 510 86.3
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 2.6e-249 865.1 527 86.7
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 3.4e-249 864.8 510 87.5
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 86.3
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 86.7
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 87.1
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 9.9e-249 863.2 510 87.3
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 86.9
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 3.8e-248 861.3 511 86.9
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 1.1e-247 859.8 511 87.3
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.4e-247 859.4 510 85.7
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 3.2e-247 858.2 510 85.7
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 5.4e-247 857.4 510 86.3
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 5.4e-247 857.4 549 82.1
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 86.7
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 1.6e-246 855.9 511 86.7
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 87.5
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 85.1
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 87.5
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 6.0e-246 854.0 510 86.7
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.0e-245 851.7 510 86.1
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.9e-245 851.3 511 86.9
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 3.9e-245 851.3 510 84.9
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 5.1e-245 850.9 510 84.9
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 5.1e-245 850.9 510 86.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 6.6e-245 850.5 499 88.2
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 8.6e-245 850.1 510 84.9
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 1.1e-244 849.7 510 86.5
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 1.5e-244 849.4 510 84.5
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 3.3e-244 848.2 510 85.9
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 4.7e-243 844.3 510 84.7
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 4.7e-243 844.3 510 84.7
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 8.1e-243 843.6 524 83.8
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 86.7
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 5.2e-242 840.9 505 87.7
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 6.9e-242 840.5 510 85.3
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 6.9e-242 840.5 512 85.0
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 8.9e-242 840.1 510 84.5
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 1.5e-241 839.3 510 84.5
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 1.5e-241 839.3 511 85.7
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 2.0e-241 839.0 512 85.7
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 1.1e-239 833.2 510 83.7
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.1e-239 833.2 510 83.9
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 3.2e-239 831.6 494 85.4
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 3.2e-239 831.6 510 83.5
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.2e-239 831.6 510 83.5
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.2e-239 831.6 510 83.5
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 9.3e-239 830.1 492 86.4
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.6e-238 827.8 510 83.5
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.7e-237 825.9 511 83.6
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 6.6e-237 823.9 503 86.1
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 1.1e-236 823.2 510 82.4
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 1.5e-236 822.8 510 82.2
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 1.5e-236 822.8 510 82.2
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 4.3e-236 821.2 510 82.0
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 5.6e-236 820.8 494 85.0
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 2.1e-235 818.9 556 79.3
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 2.0e-233 812.4 472 89.6
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 4.5e-233 811.2 494 86.0
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 9.9e-233 810.1 511 82.2
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 9.9e-233 810.1 511 81.2
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 3.8e-232 808.1 547 78.8
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.3e-229 799.7 511 81.2
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-228 796.2 494 83.0
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 1.3e-227 793.1 511 80.0
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 1.7e-224 782.7 512 80.7
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.6e-222 776.2 512 79.9
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 2.1e-222 775.8 510 80.0
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 6.7e-221 770.8 524 78.6
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 6.7e-221 770.8 524 78.6
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.9e-220 769.2 510 79.2
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 8.7e-213 743.8 440 85.5
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 1.9e-204 716.1 472 81.4
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 5.7e-204 714.5 511 75.9
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 1.1e-202 710.3 413 89.3
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 3.4e-201 705.3 503 75.7
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.8e-200 701.8 510 74.5
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 6.7e-189 664.5 514 65.8
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.5e-185 651.7 503 68.0
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.6e-182 643.3 375 87.5
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 5.3e-178 628.2 468 71.2
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 4.7e-174 615.1 514 61.3
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 5.4e-170 601.7 365 86.3
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 2.7e-169 599.4 379 82.1
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.7e-168 596.7 522 60.5
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 6.5e-168 594.7 364 84.9
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 4.4e-164 582.0 511 58.7
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 8.3e-163 577.8 506 64.6
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.8e-161 571.2 494 59.3
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.2e-158 563.9 325 91.1
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.2e-156 557.4 347 84.4
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 9.2e-154 547.7 499 54.7
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.0e-152 542.7 457 69.1
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 4.1e-146 522.3 307 89.3
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.4e-140 502.7 284 93.3
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 4.1e-130 469.2 383 62.7
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.5e-124 450.7 254 90.2
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.4e-114 417.5 508 46.9
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.6e-113 412.5 245 89.4
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.2e-105 387.9 268 78.0
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.6e-105 386.0 386 53.9
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 1.5e-103 380.9 487 43.7
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 1.1e-93 348.2 519 37.6
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.2e-86 323.9 199 87.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-70 270.8 343 46.1
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 5.0e-67 259.6 503 37.6
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 5.0e-59 233.0 142 85.9
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.7e-57 226.5 289 45.7
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.0e-56 223.8 367 42.0
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 5.2e-48 196.4 117 83.8
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.4e-47 193.7 164 69.5
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 9.2e-45 185.7 211 52.1
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.9e-43 180.6 197 52.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 2.0e-31 141.4 392 32.1
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-30 137.9 119 56.3
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.5e-26 125.2 82 81.7
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 3.5e-20 104.0 122 59.8
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.0e-11 75.9 64 60.9
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 3.6e-09 67.4 37 86.5
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 1.4e-08 65.5 85 52.9


User provided reference genes

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