Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.1e-201 706.4 358 100.0
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 4.5e-139 498.4 317 81.1
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 1.1e-137 493.8 319 78.4
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.1e-134 483.8 320 78.4
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 5.0e-130 468.4 319 76.5
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 2.8e-125 452.6 323 72.1
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 1.4e-124 450.3 323 73.1
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.2e-123 447.2 318 73.6
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 2.6e-123 446.0 322 73.9
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 3.4e-123 445.7 321 70.7
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 2.9e-122 442.6 317 71.6
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 2.9e-122 442.6 319 71.5
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 6.5e-122 441.4 317 71.0
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 3.2e-121 439.1 317 70.3
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.6e-120 436.8 320 72.8
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.1e-120 436.4 309 74.4
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.8e-119 433.3 319 71.2
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 2.3e-119 433.0 309 71.8
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.9e-119 432.2 325 68.3
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 5.2e-119 431.8 323 70.3
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 5.2e-119 431.8 325 68.0
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 8.8e-119 431.0 325 68.0
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.5e-118 430.3 317 69.7
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 1.5e-118 430.3 308 70.5
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.0e-118 429.9 325 68.0
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.6e-118 429.5 325 67.7
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.3e-117 427.2 342 66.1
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.1e-116 424.1 319 68.3
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.1e-116 424.1 308 71.8
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.4e-116 423.7 308 69.5
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 1.8e-116 423.3 315 70.5
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 4.1e-116 422.2 316 69.3
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 4.1e-116 422.2 321 67.0
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 7.0e-116 421.4 322 67.7
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 7.0e-116 421.4 309 70.6
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 7.0e-116 421.4 325 66.8
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 9.1e-116 421.0 348 64.4
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 7.7e-115 417.9 322 66.1
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 2.9e-114 416.0 308 68.5
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 3.8e-114 415.6 318 71.4
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 5.0e-114 415.2 319 68.0
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 1.1e-113 414.1 326 65.3
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.5e-113 412.9 365 63.8
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 4.2e-113 412.1 321 66.0
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 9.4e-113 411.0 353 62.6
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 9.4e-113 411.0 317 67.5
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 9.4e-113 411.0 325 65.2
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 3.6e-112 409.1 308 68.2
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 4.7e-112 408.7 343 63.6
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 1.8e-111 406.8 324 66.0
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 2.3e-111 406.4 327 64.2
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 6.7e-111 404.8 317 65.3
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 6.7e-111 404.8 341 66.0
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 8.8e-111 404.4 350 60.6
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.5e-110 403.7 352 63.6
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 2.0e-110 403.3 309 68.6
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 7.5e-110 401.4 329 64.7
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 2.2e-109 399.8 327 65.7
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.1e-108 397.5 310 66.1
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 7.0e-108 394.8 308 66.2
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 9.1e-108 394.4 308 66.9
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 2.7e-107 392.9 308 66.9
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 2.7e-107 392.9 339 64.9
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 6.5e-106 388.3 362 58.8
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 1.5e-105 387.1 333 64.0
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 4.2e-105 385.6 323 65.6
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 1.2e-104 384.0 309 64.4
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 2.1e-104 383.3 314 65.3
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 4.7e-104 382.1 328 64.0
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 4.0e-103 379.0 321 64.2
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 8.8e-103 377.9 361 57.3
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 6.3e-101 371.7 340 58.5
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 8.3e-101 371.3 352 56.8
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 4.1e-100 369.0 329 61.7
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 5.4e-100 368.6 385 55.3
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 7.0e-100 368.2 369 56.6
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 7.0e-100 368.2 385 55.3
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 4.5e-99 365.5 338 60.4
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 2.9e-98 362.8 351 57.8
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 1.5e-94 350.5 343 59.5
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.5e-94 350.5 319 60.5
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 7.5e-94 348.2 319 59.9
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 3.7e-93 345.9 320 60.0
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.1e-92 344.4 309 58.9
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 3.1e-92 342.8 331 58.9
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 3.1e-92 342.8 386 51.6
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.6e-91 340.5 331 58.6
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.6e-91 340.5 331 58.6
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 3.5e-91 339.3 338 56.5
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 3.5e-91 339.3 333 57.4
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 7.8e-91 338.2 332 55.7
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 1.0e-90 337.8 319 63.3
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 3.8e-90 335.9 330 57.0
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 5.0e-90 335.5 331 57.7
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 6.1e-88 328.6 334 57.2
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 1.8e-87 327.0 339 54.6
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 1.8e-87 327.0 320 56.2
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 5.2e-87 325.5 312 60.9
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 2.0e-86 323.6 322 57.1
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 2.6e-86 323.2 403 48.4
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 6.4e-85 318.5 320 55.0
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 1.1e-84 317.8 344 51.7
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.6e-83 313.9 330 54.5
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 5.6e-81 305.4 221 73.8
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 7.3e-81 305.1 326 53.7
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 2.5e-73 280.0 402 43.5
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 2.6e-62 243.4 204 64.2
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 4.9e-61 239.2 152 76.3
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 4.2e-60 236.1 211 58.3
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 2.7e-59 233.4 221 55.7
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 8.7e-58 228.4 170 67.6
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 2.5e-57 226.9 170 67.1
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 9.6e-57 224.9 170 67.1
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 5.2e-55 219.2 256 49.6
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 1.5e-49 201.1 341 37.8
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 5.1e-42 176.0 354 36.7
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.1e-39 168.3 331 37.2
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 4.5e-38 162.9 343 36.2
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 4.6e-35 152.9 314 33.1
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 3.0e-34 150.2 314 34.1
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 1.6e-32 144.4 127 59.1
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 4.5e-30 136.3 209 43.1
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 2.1e-27 127.5 323 31.6
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 6.0e-27 125.9 101 65.3
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.3e-26 124.8 146 43.8
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.3e-24 118.2 70 84.3
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 4.1e-23 113.2 103 56.3
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 1.4e-10 71.6 41 78.0
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 2.0e-09 67.8 57 59.6
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 1.3e-08 65.1 41 75.6


User provided reference genes

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