Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0107 Trochodendron aralioides HOM05D000231 ORTHO05D000132 5.9e-61 237.3 114 100.0
TAR623G0433 Trochodendron aralioides HOM05D000231 ORTHO05D000132 7.3e-43 177.2 110 73.6
Aqoxy1G00877 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 2.3e-28 129.0 93 62.4
Manes.09G092137 Manihot esculenta HOM05D000231 ORTHO05D000132 6.6e-28 127.5 114 57.0
Potri.006G088300 Populus trichocarpa HOM05D000231 ORTHO05D000132 3.1e-25 118.6 107 56.1
Sabra06G0067300 Salix brachista HOM05D000231 ORTHO05D000132 3.8e-23 111.7 116 50.9
GSVIVG01034128001 Vitis vinifera HOM05D000231 ORTHO05D000132 1.1e-22 110.2 113 49.6
MBI14_g08018_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 1.2e-21 106.7 110 49.1
Ciclev10012085m.g Citrus clementina HOM05D000231 ORTHO05D000132 6.0e-21 104.4 102 53.9
Hma1.2p1_0936F.1_g239000 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 3.0e-20 102.1 86 58.1
Duzib106G1367 Durio zibethinus HOM05D000231 ORTHO05D000132 7.3e-19 97.4 98 51.0
Rhsim04G0159000 Rhododendron simsii HOM05D000231 ORTHO05D000132 2.8e-18 95.5 105 46.7
CiPaw.09G195800 Carya illinoinensis HOM05D000231 ORTHO05D000132 4.8e-18 94.7 114 43.0
TWI74G1297 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 6.2e-18 94.4 113 47.8
Gohir.A04G083800 Gossypium hirsutum HOM05D000231 ORTHO05D000132 8.1e-18 94.0 113 46.0
Gohir.D04G122600 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.1e-17 93.6 113 46.0
Thecc.05G035500 Theobroma cacao HOM05D000231 ORTHO05D000132 1.1e-17 93.6 107 45.8
Gorai.012G105500 Gossypium raimondii HOM05D000231 ORTHO05D000132 1.4e-17 93.2 113 46.0
Rhsim04G0160700 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.2e-16 90.1 105 44.8
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 6.4e-15 84.3 106 45.3
PSO063G2174 Papaver somniferum HOM05D000231 ORTHO05D000132 8.4e-15 84.0 89 47.2
PSO339G1595 Papaver somniferum HOM05D000231 ORTHO05D000132 9.3e-14 80.5 96 40.6
MD12G1146100 Malus domestica HOM05D000231 ORTHO05D000132 1.2e-13 80.1 116 40.5
FvH4_6g13230 Fragaria vesca HOM05D000231 ORTHO05D000132 2.1e-13 79.3 114 41.2
FAN14G5516 Fragaria x ananassa HOM05D000231 ORTHO05D000132 2.1e-13 79.3 114 41.2
CDE06G1851 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 2.7e-13 79.0 104 41.3
Prupe.6G259300 Prunus persica HOM05D000231 ORTHO05D000132 2.7e-13 79.0 100 44.0
FAN02G0468 Fragaria x ananassa HOM05D000231 ORTHO05D000132 3.5e-13 78.6 122 40.2
FAN05G0090 Fragaria x ananassa HOM05D005320 ORTHO05D007922 4.6e-13 78.2 125 38.4
DCAR_028760 Daucus carota HOM05D000231 ORTHO05D000132 6.0e-13 77.8 71 50.7
PGR031G1929 Punica granatum HOM05D000231 ORTHO05D000132 7.9e-13 77.4 117 39.3
ATR0559G271 Amborella trichopoda HOM05D000231 ORTHO05D000132 1.8e-12 76.3 98 41.8
Eucgr.A01289 Eucalyptus grandis HOM05D000231 ORTHO05D000132 1.8e-12 76.3 91 42.9
TWI77G0617 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 2.3e-12 75.9 106 42.5
QL07p030111 Quercus lobata HOM05D000231 ORTHO05D000132 3.9e-12 75.1 93 45.2
QL07p030901 Quercus lobata HOM05D000231 ORTHO05D000132 3.9e-12 75.1 93 45.2
CiPaw.09G197000 Carya illinoinensis HOM05D000231 ORTHO05D000132 6.7e-12 74.3 86 45.3
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 8.7e-12 73.9 123 39.8
Nitab4.5_0003394g0040 Nicotiana tabacum HOM05D000231 ORTHO05D000132 1.1e-11 73.6 116 37.9
Glyma.03G069200 Glycine max HOM05D000231 ORTHO05D000132 2.5e-11 72.4 83 43.4
Nitab4.5_0000705g0040 Nicotiana tabacum HOM05D000231 ORTHO05D000132 5.6e-11 71.2 116 37.1
RcHm_v2.0_Chr3g0466061 Rosa chinensis HOM05D000231 ORTHO05D000132 1.6e-10 69.7 108 38.0
Dinv37147 Davidia involucrata HOM05D005320 ORTHO05D007922 2.1e-10 69.3 50 64.0
Phvul.010G015500 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 2.8e-10 68.9 79 43.0
CDE07G1057 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 1.1e-09 67.0 95 37.9
Glyma.01G100000 Glycine max HOM05D000231 ORTHO05D000132 1.1e-09 67.0 78 39.7
Actinidia05325 Actinidia chinensis HOM05D000231 ORTHO05D000132 1.4e-09 66.6 57 56.1
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 4.0e-09 65.1 79 41.8
Cc06_g02330 Coffea canephora HOM05D000231 ORTHO05D000132 6.9e-09 64.3 114 37.7
Lsat_1_v5_gn_5_153960 Lactuca sativa HOM05D000231 ORTHO05D000132 1.3e-07 60.1 110 33.6
SGA_v2.0_scaffold126G33760 Striga asiatica HOM05D000231 ORTHO05D000132 8.4e-07 57.4 87 32.2
Oeu010103.1 Olea europaea HOM05D000231 ORTHO05D000397 1.1e-06 57.0 120 32.5


User provided reference genes

Program Settings