Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.4e-115 418.3 205 100.0
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.4e-46 188.7 99 93.9
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.4e-46 188.7 99 93.9
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.4e-46 188.7 99 93.9
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.7e-45 185.7 99 92.9
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 8.2e-45 184.5 98 91.8
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.1e-44 182.2 99 90.9
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.9e-44 181.4 99 89.9
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.8e-23 111.3 91 64.8
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 3.4e-22 109.4 90 63.3
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 1.1e-20 104.4 75 65.3
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.4e-20 104.0 72 66.7
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.4e-20 103.2 71 70.4
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.4e-20 103.2 71 70.4
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 7.0e-20 101.7 72 66.7
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 9.1e-20 101.3 95 54.7
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 9.1e-20 101.3 72 65.3
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 9.1e-20 101.3 91 56.0
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 2.0e-19 100.1 72 66.7
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 2.0e-19 100.1 71 64.8
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 2.0e-19 100.1 91 54.9
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 7.7e-19 98.2 71 67.6
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 1.7e-18 97.1 93 54.8
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 1.7e-18 97.1 92 57.6
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.3e-18 96.7 139 43.2
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.9e-18 96.3 71 64.8
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 2.9e-18 96.3 71 60.6
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.8e-18 95.9 96 53.1
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 3.8e-18 95.9 96 53.1
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 5.0e-18 95.5 71 62.0
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 5.0e-18 95.5 72 65.3
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 8.6e-18 94.7 96 52.1
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.1e-17 94.4 93 54.8
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 2.5e-17 93.2 71 63.4
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.5e-17 93.2 81 60.5
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 3.2e-17 92.8 96 54.2
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 4.2e-17 92.4 71 62.0
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 4.2e-17 92.4 118 48.3
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 9.5e-17 91.3 74 63.5
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.2e-16 90.9 98 50.0
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 1.2e-16 90.9 75 61.3
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 1.2e-16 90.9 99 50.5
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 1.6e-16 90.5 110 48.2
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 1.6e-16 90.5 81 59.3
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 2.1e-16 90.1 110 48.2
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.1e-16 90.1 81 59.3
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 2.1e-16 90.1 75 58.7
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 2.8e-16 89.7 96 54.2
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 2.8e-16 89.7 89 53.9
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 2.8e-16 89.7 71 62.0
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 2.8e-16 89.7 111 48.6
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 3.6e-16 89.4 110 47.3
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 3.6e-16 89.4 72 62.5
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 3.6e-16 89.4 72 59.7
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 6.1e-16 88.6 62 67.7
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 6.1e-16 88.6 70 61.4
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 6.1e-16 88.6 99 49.5
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 6.1e-16 88.6 81 56.8
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 8.0e-16 88.2 74 60.8
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 8.0e-16 88.2 71 60.6
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.0e-15 87.8 75 58.7
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 1.0e-15 87.8 110 46.4
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.0e-15 87.8 75 58.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.0e-15 87.8 109 48.6
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 1.4e-15 87.4 75 57.3
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 1.4e-15 87.4 72 59.7
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.4e-15 87.4 72 59.7
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.4e-15 87.4 67 64.2
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.8e-15 87.0 75 58.7
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 1.8e-15 87.0 72 59.7
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 2.3e-15 86.7 110 47.3
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 2.3e-15 86.7 71 59.2
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.3e-15 86.7 71 59.2
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.3e-15 86.7 71 59.2
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.3e-15 86.7 71 59.2
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.3e-15 86.7 71 59.2
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 2.3e-15 86.7 72 58.3
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 2.3e-15 86.7 75 57.3
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 2.3e-15 86.7 75 56.0
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 3.0e-15 86.3 71 60.6
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.0e-15 85.9 71 57.7
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.0e-15 85.9 71 57.7
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 4.0e-15 85.9 75 56.0
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 4.0e-15 85.9 71 59.2
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 5.2e-15 85.5 90 51.1
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 5.2e-15 85.5 96 49.0
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 5.2e-15 85.5 71 59.2
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 6.8e-15 85.1 75 56.0
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 8.8e-15 84.7 61 63.9
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.2e-14 84.3 96 44.8
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 1.5e-14 84.0 71 57.7
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.5e-14 84.0 71 56.3
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 2.0e-14 83.6 75 56.0
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 2.0e-14 83.6 70 57.1
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 3.4e-14 82.8 89 50.6
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 3.4e-14 82.8 82 54.9
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 5.7e-14 82.0 81 55.6
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 5.7e-14 82.0 81 55.6
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 7.5e-14 81.6 70 55.7
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.3e-13 80.9 72 54.2
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 3.7e-13 79.3 62 61.3
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 4.9e-13 79.0 74 55.4
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 6.3e-13 78.6 163 37.4
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 6.3e-13 78.6 72 52.8
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 6.3e-13 78.6 86 51.2
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 2.4e-12 76.6 58 63.8
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 1.6e-11 73.9 72 55.6
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 3.5e-11 72.8 73 47.9
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 6.6e-10 68.6 61 50.8
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 4.3e-09 65.9 71 50.7
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.0e-07 59.7 80 41.2
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 5.7e-06 55.5 33 75.8
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 5.7e-06 55.5 33 75.8


User provided reference genes

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