Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 4.7e-24 113.6 54 100.0
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 6.6e-18 93.2 53 77.4
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 8.6e-18 92.8 54 77.8
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 2.5e-17 91.3 52 73.1
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 4.2e-17 90.5 52 75.0
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 5.5e-17 90.1 50 78.0
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 7.2e-17 89.7 50 78.0
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.2e-16 89.0 49 79.6
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 2.1e-16 88.2 52 73.1
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 2.8e-16 87.8 49 75.5
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 4.7e-16 87.0 53 73.6
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 6.1e-16 86.7 52 69.2
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 8.0e-16 86.3 51 70.6
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 8.0e-16 86.3 51 70.6
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 1.8e-15 85.1 52 73.1
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 1.8e-15 85.1 54 70.4
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 2.3e-15 84.7 52 73.1
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 3.0e-15 84.3 53 67.9
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 4.0e-15 84.0 51 68.6
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 4.0e-15 84.0 50 70.0
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 6.8e-15 83.2 52 65.4
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 6.8e-15 83.2 47 74.5
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 2.0e-14 81.6 52 75.0
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 2.0e-14 81.6 52 75.0
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 2.0e-14 81.6 52 67.3
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 2.6e-14 81.3 52 65.4
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 3.4e-14 80.9 47 74.5
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 5.7e-14 80.1 51 64.7
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 5.7e-14 80.1 49 67.3
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 5.7e-14 80.1 45 75.6
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 1.3e-13 79.0 49 67.3
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 1.7e-13 78.6 48 70.8
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 2.2e-13 78.2 48 66.7
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 2.2e-13 78.2 48 66.7
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 2.2e-13 78.2 50 66.0
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 2.2e-13 78.2 50 68.0
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 2.2e-13 78.2 56 62.5
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 3.7e-13 77.4 47 66.0
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 3.7e-13 77.4 48 68.8
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 4.9e-13 77.0 49 63.3
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 8.3e-13 76.3 48 64.6
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 8.3e-13 76.3 48 64.6
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 8.3e-13 76.3 48 64.6
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 8.3e-13 76.3 49 67.3
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 1.1e-12 75.9 41 82.9
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.4e-12 75.5 48 62.5
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.4e-12 75.5 48 62.5
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 1.8e-12 75.1 48 60.4
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 2.4e-12 74.7 50 68.0
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 3.2e-12 74.3 42 73.8
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 4.1e-12 73.9 42 73.8
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 4.1e-12 73.9 47 63.8
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 5.4e-12 73.6 52 59.6
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 5.4e-12 73.6 48 60.4
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 7.0e-12 73.2 53 58.5
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 9.2e-12 72.8 43 69.8
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 1.2e-11 72.4 43 69.8
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 2.0e-11 71.6 48 58.3
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 2.0e-11 71.6 49 61.2
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 2.7e-11 71.2 46 60.9
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 4.5e-11 70.5 39 74.4
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 4.5e-11 70.5 53 60.4
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 1.6e-08 62.0 38 65.8
HanXRQChr16g0507891 Helianthus annuus HOM05D008199 ORTHO05D010334 3.1e-07 57.8 49 55.1
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 3.1e-07 57.8 38 60.5
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 1.5e-06 55.5 68 41.2


User provided reference genes

Program Settings