Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0009 Trochodendron aralioides HOM05D006892 ORTHO05D414936 8.1e-163 577.0 291 100.0
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 1.3e-19 101.3 70 72.9
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 2.2e-19 100.5 68 77.9
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 2.1e-14 84.0 78 57.7
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 4.0e-13 79.7 71 59.2
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 6.9e-13 79.0 70 60.0
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 5.8e-12 75.9 126 36.5
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 7.6e-12 75.5 70 54.3
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 1.3e-11 74.7 65 55.4
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 1.3e-11 74.7 65 55.4
FAN25G3555 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.1e-10 71.6 145 34.5
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 1.9e-10 70.9 62 50.0
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 4.2e-10 69.7 152 32.2
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 5.5e-10 69.3 78 48.7
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 5.5e-10 69.3 76 43.4
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 7.1e-10 68.9 62 48.4
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 7.1e-10 68.9 78 47.4
Nn2g13529 Nelumbo nucifera HOM05D001463 ORTHO05D001282 7.1e-10 68.9 132 33.3
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 9.3e-10 68.6 76 47.4
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 9.3e-10 68.6 76 46.1
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 9.3e-10 68.6 76 48.7
CSS0014654 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.1e-09 67.4 68 51.5
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 2.1e-09 67.4 62 46.8
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 2.1e-09 67.4 76 47.4
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 2.7e-09 67.0 78 48.7
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 3.5e-09 66.6 62 46.8
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 3.5e-09 66.6 71 45.1
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 4.6e-09 66.2 76 48.7
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 6.0e-09 65.9 62 45.2
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 1.0e-08 65.1 76 44.7
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 1.0e-08 65.1 76 43.4
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 1.3e-08 64.7 123 32.5
FAN16G2865 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.8e-08 64.3 148 32.4
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 2.3e-08 63.9 78 47.4
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 2.3e-08 63.9 68 45.6
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 3.0e-08 63.5 74 45.9
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.1e-08 62.8 53 52.8
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 5.1e-08 62.8 71 46.5
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 8.7e-08 62.0 77 46.8
Actinidia02902 Actinidia chinensis HOM05D001463 ORTHO05D001282 1.5e-07 61.2 41 65.9
CANSAT54G2006 Cannabis sativa HOM05D001463 ORTHO05D001282 1.5e-07 61.2 125 31.2
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 1.9e-07 60.8 76 39.5
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.7e-07 59.3 80 46.2
Rhsim05G0199800 Rhododendron simsii HOM05D006892 ORTHO05D008592 5.7e-07 59.3 78 46.2
TAR636G3077 Trochodendron aralioides HOM05D001463 ORTHO05D001282 5.7e-07 59.3 37 70.3
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 7.4e-07 58.9 75 42.7
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 7.4e-07 58.9 121 33.1
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 7.4e-07 58.9 70 44.3
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 9.6e-07 58.5 80 48.8
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 9.6e-07 58.5 79 49.4
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 9.6e-07 58.5 123 30.1
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 9.6e-07 58.5 28 82.1
Potri.016G103900 Populus trichocarpa HOM05D006892 ORTHO05D008592 9.6e-07 58.5 45 55.6
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 1.3e-06 58.2 26 88.5
FAN21G1105 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.3e-06 58.2 141 30.5
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 1.3e-06 58.2 76 43.4
Thecc.09G312500 Theobroma cacao HOM05D001463 ORTHO05D001282 1.3e-06 58.2 58 46.6
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 1.6e-06 57.8 60 55.0
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.6e-06 57.8 74 43.2
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.6e-06 57.8 66 47.0
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.6e-06 57.8 74 43.2
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.6e-06 57.8 74 43.2
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.6e-06 57.8 66 47.0
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 1.6e-06 57.8 71 40.8
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 2.1e-06 57.4 73 39.7
Sabra09G0027300 Salix brachista HOM05D001463 ORTHO05D001282 2.1e-06 57.4 48 54.2
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 2.1e-06 57.4 57 49.1
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.8e-06 57.0 79 48.1
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 2.8e-06 57.0 66 48.5
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 2.8e-06 57.0 76 40.8
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 2.8e-06 57.0 76 39.5
Nn2g11290 Nelumbo nucifera HOM05D001463 ORTHO05D001282 2.8e-06 57.0 119 33.6
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.8e-06 57.0 115 34.8
CDE02G2266 Ceratophyllum demersum HOM05D006892 ORTHO05D008592 3.7e-06 56.6 65 46.2
arahy.Tifrunner.gnm1.ann1.AC77RP Arachis hypogaea HOM05D006892 ORTHO05D008592 4.8e-06 56.2 76 39.5
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 4.8e-06 56.2 72 45.8
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 4.8e-06 56.2 28 78.6
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 4.8e-06 56.2 101 33.7
Duzib150G0778 Durio zibethinus HOM05D001463 ORTHO05D001282 6.2e-06 55.8 64 40.6
RcHm_v2.0_Chr5g0066931 Rosa chinensis HOM05D001463 ORTHO05D001282 6.2e-06 55.8 117 30.8
GSVIVG01034067001 Vitis vinifera HOM05D006892 ORTHO05D008592 6.2e-06 55.8 63 47.6
arahy.Tifrunner.gnm1.ann1.71B432 Arachis hypogaea HOM05D006892 ORTHO05D008592 8.2e-06 55.5 76 39.5
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.2e-06 55.5 58 46.6
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 8.2e-06 55.5 74 40.5
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 8.2e-06 55.5 66 47.0


User provided reference genes

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