Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.3e-185 654.1 756 100.0
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 8.5e-55 219.5 659 68.7
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 3.0e-44 184.5 681 76.1
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 6.7e-44 183.3 672 78.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.8e-41 175.3 663 65.5
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 9.1e-41 172.9 657 69.3
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 4.5e-40 170.6 663 66.5
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 2.2e-39 168.3 695 72.9
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 3.8e-39 167.5 680 75.3
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 3.2e-38 164.5 682 72.3
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 3.2e-38 164.5 682 72.3
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 7.2e-38 163.3 138 65.2
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 7.2e-38 163.3 155 58.7
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 7.2e-38 163.3 658 74.3
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 9.4e-38 162.9 138 65.2
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 3.6e-37 161.0 672 76.2
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 8.0e-37 159.8 658 73.9
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 1.0e-36 159.5 656 69.4
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 1.4e-36 159.1 673 75.9
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 3.0e-36 157.9 130 67.7
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 3.0e-36 157.9 141 61.0
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.2e-35 156.0 674 74.9
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 1.5e-35 155.6 666 64.1
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.0e-35 155.2 130 63.1
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 2.0e-35 155.2 161 55.3
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 4.4e-35 154.1 152 55.3
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 4.4e-35 154.1 152 55.3
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.5e-35 153.3 289 51.9
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 9.8e-35 152.9 663 74.2
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.7e-34 152.1 148 56.1
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 1.7e-34 152.1 138 60.9
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 1.7e-34 152.1 667 67.8
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.7e-34 152.1 660 68.8
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 1.7e-34 152.1 660 68.8
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 1.7e-34 152.1 147 53.7
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 1.7e-34 152.1 676 73.5
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 2.2e-34 151.8 138 60.9
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 2.2e-34 151.8 693 58.6
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 2.8e-34 151.4 138 58.0
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 4.8e-34 150.6 682 73.5
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 8.3e-34 149.8 147 55.8
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.8e-33 148.7 147 55.1
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.8e-33 148.7 147 55.1
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.8e-33 148.7 136 60.3
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 2.4e-33 148.3 181 50.8
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.1e-33 147.5 132 59.1
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 5.4e-33 147.1 138 57.2
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 5.4e-33 147.1 145 55.9
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 7.0e-33 146.7 141 61.0
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 9.1e-33 146.4 132 59.1
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 9.1e-33 146.4 634 64.4
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 1.2e-32 146.0 149 53.7
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.2e-32 146.0 145 55.2
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.6e-32 145.6 142 55.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.0e-32 145.2 136 57.4
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 3.5e-32 144.4 151 56.3
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 3.5e-32 144.4 151 56.3
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 7.7e-32 143.3 147 55.8
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.7e-31 142.1 144 52.8
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 1.7e-31 142.1 152 55.9
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 2.9e-31 141.4 117 65.8
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 3.8e-31 141.0 173 48.0
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.8e-31 141.0 173 48.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 5.0e-31 140.6 165 52.1
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 5.0e-31 140.6 148 53.4
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 1.9e-30 138.7 151 54.3
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.9e-30 138.7 151 53.6
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 4.2e-30 137.5 148 52.7
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 5.5e-30 137.1 135 57.0
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 9.5e-30 136.3 143 54.5
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.6e-29 135.6 158 50.6
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 2.1e-29 135.2 156 51.3
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 3.6e-29 134.4 94 74.5
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 3.6e-29 134.4 125 58.4
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 6.1e-29 133.7 133 52.6
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 8.0e-29 133.3 150 51.3
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 1.0e-28 132.9 156 52.6
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 1.4e-28 132.5 151 53.0
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 1.4e-28 132.5 142 54.2
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 4.0e-28 131.0 115 62.6
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 6.8e-28 130.2 144 52.8
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 2.0e-27 128.6 136 54.4
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 2.6e-27 128.3 103 64.1
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 3.4e-27 127.9 147 49.7
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.3e-26 125.9 155 49.7
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.7e-26 125.6 145 53.1
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.7e-26 125.6 113 59.3
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.8e-26 124.8 165 46.1
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 4.9e-26 124.0 145 48.3
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.1e-25 122.9 85 67.1
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.8e-25 122.1 126 54.0
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 2.4e-25 121.7 111 59.5
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.4e-25 121.7 85 68.2
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 3.1e-25 121.3 178 44.4
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 5.4e-25 120.6 113 60.2
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 1.0e-23 116.3 82 69.5
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.5e-22 112.5 85 64.7
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 1.9e-22 112.1 145 44.1
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.3e-22 111.3 154 44.2
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 7.3e-22 110.2 154 43.5
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 6.1e-21 107.1 82 63.4
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 3.0e-20 104.8 139 46.0
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 7.8e-16 90.1 76 59.2
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.7e-15 89.0 109 48.6
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.9e-14 85.5 161 32.9
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 3.3e-14 84.7 145 36.6
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 4.3e-14 84.3 80 57.5
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 7.3e-14 83.6 108 40.7
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 1.6e-13 82.4 107 43.0
CDE07G1407 Ceratophyllum demersum HOM05D000186 ORTHO05D006806 2.1e-13 82.0 113 65.5
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.0e-12 79.7 60 61.7
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 4.0e-12 77.8 83 48.2
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 4.0e-12 77.8 83 48.2
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 3.4e-11 74.7 69 55.1
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.5e-11 73.6 50 72.0
Glyma.18G252502 Glycine max HOM05D026316 ORTHO05D029154 4.9e-10 70.9 109 72.5
Nitab4.5_0000029g0140 Nicotiana tabacum HOM05D026316 ORTHO05D029154 1.7e-07 62.4 115 49.6
Nitab4.5_0027863g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.0e-07 60.8 137 69.3
Haze_06041 Corylus avellana HOM05D026316 ORTHO05D029154 8.6e-07 60.1 125 45.6


User provided reference genes

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