Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 9.9e-194 679.9 325 100.0
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 3.3e-141 505.4 311 73.6
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.1e-139 500.4 323 73.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.5e-138 496.5 338 68.3
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 2.6e-138 495.7 314 72.6
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 3.4e-138 495.4 325 71.1
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 8.5e-137 490.7 324 71.9
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.1e-136 490.3 308 74.4
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 1.9e-136 489.6 312 71.5
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 5.5e-136 488.0 291 79.0
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 2.3e-134 482.6 317 68.8
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 2.0e-133 479.6 324 68.2
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 2.6e-133 479.2 302 71.9
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.6e-130 469.9 301 72.4
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.6e-130 469.9 301 72.4
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 2.0e-130 469.5 312 67.9
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 3.5e-130 468.8 315 69.5
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.7e-129 466.5 318 67.6
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 2.2e-129 466.1 325 67.7
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 5.0e-129 464.9 302 70.2
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 6.5e-129 464.5 310 66.8
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 1.2e-127 460.3 306 69.3
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.2e-127 460.3 301 71.4
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.6e-127 459.9 306 69.0
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 2.1e-127 459.5 314 66.2
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 6.1e-127 458.0 310 67.1
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 8.8e-126 454.1 348 61.2
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 1.1e-125 453.8 312 66.3
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.5e-125 453.4 299 70.9
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 2.6e-125 452.6 323 64.4
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 4.4e-125 451.8 296 69.9
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 1.7e-124 449.9 308 67.9
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.7e-124 449.9 300 68.3
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 2.8e-124 449.1 296 69.3
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 4.8e-124 448.4 313 66.5
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 3.1e-123 445.7 302 65.6
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 4.1e-123 445.3 299 67.6
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 5.3e-123 444.9 301 68.4
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 7.0e-123 444.5 315 66.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 1.6e-122 443.4 305 66.6
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.6e-122 443.4 295 67.5
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 1.6e-122 443.4 298 67.1
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 3.5e-122 442.2 301 65.8
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 3.5e-122 442.2 307 67.1
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 5.9e-122 441.4 302 65.9
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 1.3e-121 440.3 324 63.3
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.2e-121 439.5 306 66.7
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 3.8e-121 438.7 306 66.3
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.5e-120 436.8 307 66.4
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 2.5e-120 436.0 321 63.9
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 9.4e-120 434.1 302 65.9
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.6e-119 432.2 298 72.5
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 2.3e-118 429.5 305 65.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.4e-117 425.6 331 61.3
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 3.4e-117 425.6 296 65.9
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 7.5e-117 424.5 307 68.7
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 1.3e-116 423.7 325 61.5
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 2.8e-116 422.5 302 64.9
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 3.7e-116 422.2 295 66.4
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 4.8e-116 421.8 298 66.8
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 6.3e-116 421.4 295 67.1
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 6.3e-116 421.4 319 61.4
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 6.3e-116 421.4 289 66.4
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 8.3e-116 421.0 301 64.5
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 8.3e-116 421.0 298 66.1
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 1.1e-115 420.6 298 64.8
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 1.1e-115 420.6 299 66.6
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 4.1e-115 418.7 298 66.4
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 4.1e-115 418.7 312 62.5
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 5.4e-115 418.3 298 64.8
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 9.1e-115 417.5 305 63.6
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 3.5e-114 415.6 296 64.5
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.5e-114 415.6 291 65.6
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 7.7e-114 414.5 298 64.1
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 1.3e-113 413.7 435 50.3
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 5.0e-113 411.8 300 64.7
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 8.5e-113 411.0 298 63.8
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.6e-111 406.8 292 65.1
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 2.7e-111 406.0 298 63.1
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 3.6e-111 405.6 332 59.3
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 3.6e-111 405.6 305 62.6
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 6.1e-111 404.8 263 71.9
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 8.0e-111 404.4 302 64.6
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 4.0e-110 402.1 294 64.3
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 1.3e-108 397.1 300 61.3
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.0e-106 389.8 305 60.3
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.7e-106 389.4 300 61.3
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 2.3e-105 386.3 332 57.8
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.1e-104 384.0 325 57.2
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.9e-104 383.3 304 59.9
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 5.6e-104 381.7 446 46.9
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 4.0e-102 375.6 290 61.0
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 8.3e-100 367.9 321 57.0
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 1.3e-97 360.5 299 57.9
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.7e-97 360.1 293 57.3
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.5e-96 357.1 298 56.7
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.4e-94 350.5 306 55.9
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.0e-89 334.3 305 52.8
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 2.2e-84 316.6 234 64.1
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 8.1e-79 298.1 293 46.8
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 2.4e-75 286.6 304 45.7
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.9e-72 276.9 295 46.1
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.6e-71 273.9 183 66.1
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 6.6e-65 251.9 151 74.8
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 7.9e-58 228.4 295 40.7
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.5e-53 212.6 256 43.0
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 1.2e-45 188.0 131 64.9
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.1e-40 171.4 129 62.8
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 5.3e-38 162.5 87 73.6
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 4.5e-13 79.7 70 55.7
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 1.7e-07 61.2 88 38.6


User provided reference genes

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