Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3489 Trochodendron aralioides HOM05D010626 ORTHO05D012901 9.1e-37 156.4 78 100.0
TAR629G1463 Trochodendron aralioides HOM05D010626 ORTHO05D012901 1.7e-35 152.1 78 97.4
Nn1g00060 Nelumbo nucifera HOM05D010626 ORTHO05D012901 2.5e-18 95.1 78 56.4
Nn1g09010 Nelumbo nucifera HOM05D010626 ORTHO05D012901 2.5e-18 95.1 78 56.4
Nn1g04342 Nelumbo nucifera HOM05D010626 ORTHO05D012901 5.9e-12 73.9 79 51.9
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 5.9e-12 73.9 80 53.8
Potri.019G091100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.1e-10 69.7 80 50.0
Potri.011G063700 Populus trichocarpa HOM05D010626 ORTHO05D012901 1.5e-10 69.3 79 46.8
Manes.16G035800 Manihot esculenta HOM05D010626 ORTHO05D012901 3.3e-10 68.2 75 49.3
DCAR_019589 Daucus carota HOM05D013347 ORTHO05D025247 2.1e-09 65.5 78 43.6
Migut.M00747 Erythranthe guttata HOM05D013347 ORTHO05D015592 2.1e-09 65.5 78 47.4
QL05p044482 Quercus lobata HOM05D010626 ORTHO05D012901 2.1e-09 65.5 79 45.6
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 2.8e-09 65.1 84 47.6
Cfa014706 Carpinus fangiana HOM05D017147 ORTHO05D011251 4.7e-09 64.3 82 53.7
Prupe.4G170900 Prunus persica HOM05D009672 ORTHO05D011357 8.9e-08 60.1 79 43.0
Sabra04G0035100 Salix brachista HOM05D010626 ORTHO05D012901 8.9e-08 60.1 79 45.6
Gohir.D10G031600 Gossypium hirsutum HOM05D013505 ORTHO05D013816 1.5e-07 59.3 83 43.4
Rhsim04G0024400 Rhododendron simsii HOM05D010626 ORTHO05D012901 1.5e-07 59.3 98 42.9
Haze_09355 Corylus avellana HOM05D009672 ORTHO05D011357 2.0e-07 58.9 78 42.3
Gohir.A10G030700 Gossypium hirsutum HOM05D013505 ORTHO05D013816 2.0e-07 58.9 83 42.2
Potri.004G053700 Populus trichocarpa HOM05D010626 ORTHO05D012901 2.0e-07 58.9 79 41.8
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 2.6e-07 58.5 82 42.7
Potri.001G376100 Populus trichocarpa HOM05D013347 ORTHO05D011357 2.6e-07 58.5 78 42.3
Haze_09356 Corylus avellana HOM05D009672 ORTHO05D011357 3.4e-07 58.2 78 41.0
Manes.17G053300 Manihot esculenta HOM05D010626 ORTHO05D012901 3.4e-07 58.2 78 46.2
THA.LOC104800858 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 4.4e-07 57.8 79 39.2
Thecc.06G175200 Theobroma cacao HOM05D013505 ORTHO05D013816 4.4e-07 57.8 84 46.4
DCAR_021013 Daucus carota HOM05D013347 ORTHO05D025247 5.8e-07 57.4 79 40.5
Manes.13G138500 Manihot esculenta HOM05D009623 ORTHO05D011251 5.8e-07 57.4 86 47.7
Manes.15G091300 Manihot esculenta HOM05D013347 ORTHO05D011357 5.8e-07 57.4 77 40.3
Haze_13332 Corylus avellana HOM05D017147 ORTHO05D011251 7.5e-07 57.0 82 48.8
Haze_13334 Corylus avellana HOM05D017147 ORTHO05D011251 7.5e-07 57.0 82 48.8
Gohir.D05G159500 Gossypium hirsutum HOM05D010626 ORTHO05D012901 7.5e-07 57.0 79 43.0
Gorai.011G033200 Gossypium raimondii HOM05D013505 ORTHO05D013816 9.8e-07 56.6 83 42.2
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 9.8e-07 56.6 82 39.0
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 1.3e-06 56.2 82 41.5
Cfa019597 Carpinus fangiana HOM05D009672 ORTHO05D011357 1.3e-06 56.2 78 41.0
Ciclev10017647m.g Citrus clementina HOM05D009623 ORTHO05D011251 1.3e-06 56.2 84 40.5
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 1.3e-06 56.2 85 41.2
CSS0031766 Camellia sinensis var. sinensis HOM05D015821 ORTHO05D013816 1.7e-06 55.8 80 45.0
Phvul.005G097000 Phaseolus vulgaris HOM05D018869 ORTHO05D020756 1.7e-06 55.8 78 39.7
Potri.011G096800 Populus trichocarpa HOM05D013347 ORTHO05D011357 1.7e-06 55.8 78 41.0
Thecc.06G175300 Theobroma cacao HOM05D013505 ORTHO05D013816 1.7e-06 55.8 83 43.4
Cfa019599 Carpinus fangiana HOM05D009672 ORTHO05D011357 2.2e-06 55.5 78 41.0
COL.COLO4_31344 Corchorus olitorius HOM05D010626 ORTHO05D012901 2.9e-06 55.1 83 44.6
Sabra13G0100500 Salix brachista HOM05D017147 ORTHO05D011251 2.9e-06 55.1 62 50.0
AUR62019556 Chenopodium quinoa HOM05D001807 ORTHO05D038258 3.7e-06 54.7 87 36.8
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 4.9e-06 54.3 84 39.3
Glyma.13G171450 Glycine max HOM05D041995 ORTHO05D035996 4.9e-06 54.3 79 44.3
Gorai.009G164400 Gossypium raimondii HOM05D010626 ORTHO05D012901 4.9e-06 54.3 79 40.5
Rhsim06G0204900 Rhododendron simsii HOM05D013347 ORTHO05D011357 4.9e-06 54.3 111 32.4


User provided reference genes

Program Settings