Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 6.0e-166 587.4 294 100.0
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.0e-117 427.2 294 69.0
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 5.0e-112 408.3 295 69.8
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 8.8e-109 397.5 295 66.4
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.5e-108 396.7 294 65.6
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.5e-108 396.7 294 65.6
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.5e-108 396.7 293 64.5
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.4e-108 395.2 295 67.8
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 9.8e-108 394.0 295 65.4
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.7e-107 393.3 295 65.4
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 4.9e-107 391.7 294 66.7
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.2e-105 387.1 295 64.7
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 2.3e-104 382.9 300 65.0
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 2.5e-103 379.4 297 64.0
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 3.3e-103 379.0 295 64.4
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 5.6e-103 378.3 294 64.3
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.2e-102 377.1 295 63.7
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 2.8e-102 375.9 295 63.4
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 3.6e-102 375.6 296 62.2
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 5.2e-101 371.7 294 61.9
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 6.8e-101 371.3 295 63.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.2e-100 370.5 295 62.0
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.4e-100 368.6 294 62.9
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 5.7e-100 368.2 296 64.2
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 7.5e-100 367.9 295 60.7
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.3e-99 367.1 294 62.9
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-99 366.7 296 61.8
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.2e-99 366.3 294 62.2
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 3.7e-99 365.5 295 62.0
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.9e-99 365.2 296 61.5
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 4.9e-99 365.2 294 62.2
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 6.4e-99 364.8 295 60.7
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 8.3e-99 364.4 296 61.5
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 2.4e-98 362.8 297 62.0
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 7.0e-98 361.3 294 60.2
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 2.7e-97 359.4 295 60.7
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 5.9e-97 358.2 294 60.2
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 7.8e-97 357.8 290 61.0
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 7.8e-97 357.8 277 63.2
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 7.8e-97 357.8 295 60.7
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.0e-96 357.5 295 61.4
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.3e-96 357.1 296 61.8
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 3.9e-96 355.5 293 61.4
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 5.0e-96 355.1 293 60.8
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 5.0e-96 355.1 293 61.1
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 8.6e-96 354.4 295 60.7
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.9e-95 353.2 295 60.7
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.5e-95 352.8 294 61.6
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 2.5e-95 352.8 296 59.8
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 6.2e-94 348.2 292 59.9
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 8.0e-94 347.8 293 60.8
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 1.0e-93 347.4 293 60.8
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.4e-93 347.1 295 59.7
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.3e-93 346.3 295 59.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 6.8e-93 344.7 295 59.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 4.4e-92 342.0 293 59.7
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 5.8e-92 341.7 294 58.2
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 7.5e-92 341.3 295 59.3
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 2.2e-91 339.7 295 58.3
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 3.7e-91 339.0 293 58.4
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 6.4e-91 338.2 293 58.4
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 1.4e-90 337.0 294 57.5
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 9.2e-90 334.3 294 58.2
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.2e-89 334.0 294 58.2
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 1.6e-89 333.6 294 55.8
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 3.5e-89 332.4 294 57.1
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 4.6e-89 332.0 294 56.5
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.6e-89 332.0 296 58.1
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.1e-87 327.4 296 57.4
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 3.3e-87 325.9 297 54.9
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 3.3e-87 325.9 303 57.1
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 5.6e-87 325.1 297 56.2
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 9.5e-87 324.3 296 55.1
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.8e-86 322.8 296 54.4
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 4.7e-86 322.0 298 54.7
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.4e-85 320.5 295 54.2
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.8e-85 320.1 294 54.1
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 3.1e-85 319.3 295 56.6
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 5.2e-85 318.5 294 54.1
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 6.8e-85 318.2 298 54.7
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.2e-84 317.4 334 52.1
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 1.5e-84 317.0 295 54.9
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 4.4e-84 315.5 297 53.2
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 6.4e-83 311.6 295 54.6
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 5.4e-82 308.5 258 61.2
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.2e-81 307.4 286 52.8
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 1.6e-81 307.0 295 55.3
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 2.3e-77 293.1 267 55.8
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 2.9e-75 286.2 253 56.1
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.4e-74 283.1 294 51.4
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 8.1e-70 268.1 267 53.9
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 4.8e-62 242.3 294 43.2
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 9.9e-60 234.6 296 42.6
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 6.4e-59 231.9 294 42.2
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.6e-57 227.3 254 48.0
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.6e-57 227.3 254 48.0
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 2.5e-55 219.9 251 46.6
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 4.9e-51 205.7 299 40.5
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.1e-47 194.5 166 60.2
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.8e-46 189.9 150 60.7
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 4.0e-45 186.0 150 59.3
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.5e-44 182.6 154 57.8
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 1.1e-37 161.4 146 53.4
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 6.9e-37 158.7 120 61.7
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 7.4e-31 138.7 117 55.6
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.0e-27 128.3 96 66.7
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 1.7e-27 127.5 108 54.6
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.6e-23 113.6 111 52.3
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 6.5e-19 99.0 53 84.9
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.4e-18 95.1 99 49.5
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.1e-09 67.4 86 44.2
TAR626G1040 Trochodendron aralioides HOM05D006903 ORTHO05D416170 2.3e-08 63.9 65 56.9
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.0e-07 60.8 50 62.0
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 2.8e-06 57.0 53 54.7


User provided reference genes

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