Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3406 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.3e-134 483.0 239 100.0
TAR633G2814 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.0e-22 111.3 73 82.2
Nn2g10984 Nelumbo nucifera HOM05D000842 ORTHO05D000650 1.1e-16 91.3 73 65.8
CDE06G1580 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 1.3e-14 84.3 73 58.9
TAR381G1127 Trochodendron aralioides HOM05D000015 ORTHO05D000734 1.8e-14 84.0 46 80.4
Dinv28686 Davidia involucrata HOM05D000842 ORTHO05D000650 2.3e-14 83.6 73 60.3
MBI03_g33624_MAGBIO Magnolia biondii HOM05D000842 ORTHO05D000650 9.7e-13 78.2 73 60.3
CiPaw.13G071300 Carya illinoinensis HOM05D000842 ORTHO05D000650 1.3e-12 77.8 67 62.7
Manes.02G216400 Manihot esculenta HOM05D000842 ORTHO05D000650 1.3e-12 77.8 73 58.9
CSS0048360 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 2.8e-12 76.6 73 57.5
Haze_24396 Corylus avellana HOM05D000842 ORTHO05D000650 6.3e-12 75.5 73 54.8
Peaxi162Scf00239g00098 Petunia axillaris HOM05D000842 ORTHO05D000650 6.3e-12 75.5 67 58.2
CSS0023437 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 8.2e-12 75.1 73 56.2
Cfa011759 Carpinus fangiana HOM05D000842 ORTHO05D000650 1.1e-11 74.7 73 54.8
Actinidia34476 Actinidia chinensis HOM05D000842 ORTHO05D000650 4.1e-11 72.8 73 53.4
Lj1A127G60 Lonicera japonica HOM05D000842 ORTHO05D000650 5.3e-11 72.4 72 52.8
Hma1.2p1_2630F.1_g325720 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 1.5e-10 70.9 88 52.3
Potri.001G281400 Populus trichocarpa HOM05D000842 ORTHO05D000650 2.6e-10 70.1 73 47.9
Nitab4.5_0012182g0010 Nicotiana tabacum HOM05D000842 ORTHO05D000650 3.4e-10 69.7 69 52.2
CAN.G1477.1 Capsicum annuum HOM05D000842 ORTHO05D000650 4.5e-10 69.3 67 52.2
Duzib168G0310 Durio zibethinus HOM05D000842 ORTHO05D000650 4.5e-10 69.3 76 46.1
Hund05032 Selenicereus undatus HOM05D000842 ORTHO05D000650 4.5e-10 69.3 72 48.6
Cc11_g10160 Coffea canephora HOM05D000842 ORTHO05D000650 7.7e-10 68.6 87 44.8
Lsat_1_v5_gn_9_18420 Lactuca sativa HOM05D000842 ORTHO05D000650 7.7e-10 68.6 72 51.4
ATR0680G176 Amborella trichopoda HOM05D000842 ORTHO05D000650 2.2e-09 67.0 73 49.3
SEGI_02504 Sequoiadendron giganteum HOM05D000842 ORTHO05D000650 2.2e-09 67.0 73 43.8
CDE09G1082 Ceratophyllum demersum HOM05D001943 ORTHO05D001969 2.9e-09 66.6 48 68.8
MELO3C020505.2 Cucumis melo HOM05D000842 ORTHO05D000650 2.9e-09 66.6 67 50.7
ATR0307G011 Amborella trichopoda HOM05D000842 ORTHO05D000650 5.0e-09 65.9 82 43.9
MBI04_g12219_MAGBIO Magnolia biondii HOM05D001943 ORTHO05D001969 5.0e-09 65.9 49 67.3
Psat6g139640 Pisum sativum HOM05D000842 ORTHO05D000650 1.4e-08 64.3 92 38.0
SEGI_10988 Sequoiadendron giganteum HOM05D000842 ORTHO05D000650 1.9e-08 63.9 67 46.3
Glyma.02G230700 Glycine max HOM05D000842 ORTHO05D000650 2.5e-08 63.5 73 47.9
CsaV3_4G032790 Cucumis sativus L. HOM05D000842 ORTHO05D000650 4.2e-08 62.8 67 46.3
CDE11G0325 Ceratophyllum demersum HOM05D001943 ORTHO05D001969 5.5e-08 62.4 48 64.6
AUR62006390 Chenopodium quinoa HOM05D001943 ORTHO05D001969 7.2e-08 62.0 46 60.9
AUR62029730 Chenopodium quinoa HOM05D001943 ORTHO05D001969 7.2e-08 62.0 46 60.9
Hund04789 Selenicereus undatus HOM05D001943 ORTHO05D001969 7.2e-08 62.0 46 60.9
Thecc.09G355800 Theobroma cacao HOM05D000842 ORTHO05D000650 7.2e-08 62.0 66 45.5
ATR0584G225 Amborella trichopoda HOM05D001943 ORTHO05D001969 9.4e-08 61.6 45 66.7
EL10Ac4g08436 Beta vulgaris HOM05D000842 ORTHO05D000650 9.4e-08 61.6 73 42.5
Cpa.g.sc25.65 Carica papaya HOM05D000842 ORTHO05D000650 9.4e-08 61.6 80 43.8
CDE04G0048 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 9.4e-08 61.6 90 41.1
Sopen09g018970 Solanum pennellii HOM05D000842 ORTHO05D000650 9.4e-08 61.6 64 51.6
Actinidia18540 Actinidia chinensis HOM05D001943 ORTHO05D001969 1.2e-07 61.2 48 64.6
EL10Ac3g05416 Beta vulgaris HOM05D001943 ORTHO05D001969 1.2e-07 61.2 46 60.9
Gohir.D05G108600 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.2e-07 61.2 66 42.4
Gohir.D05G337400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.6e-07 60.8 73 42.5
QL01p040006 Quercus lobata HOM05D000842 ORTHO05D000650 1.6e-07 60.8 72 43.1
SHI19196 Sapria himalayana HOM05D000842 ORTHO05D000650 1.6e-07 60.8 70 44.3
TAR629G1252 Trochodendron aralioides HOM05D001943 ORTHO05D001969 1.6e-07 60.8 58 53.4
Gohir.A04G045400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 2.1e-07 60.5 73 42.5
Gorai.009G361700 Gossypium raimondii HOM05D000842 ORTHO05D000650 2.1e-07 60.5 73 42.5
Aqoxy7G04070 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 2.7e-07 60.1 80 40.0
COL.COLO4_03606 Corchorus olitorius HOM05D000842 ORTHO05D000650 2.7e-07 60.1 73 41.1
Gorai.002G046000 Gossypium raimondii HOM05D000842 ORTHO05D000650 2.7e-07 60.1 73 41.1
GSVIVG01024666001 Vitis vinifera HOM05D000842 ORTHO05D000650 2.7e-07 60.1 73 46.6
Zm00001eb140330 Zea mays HOM05D001943 ORTHO05D001969 2.7e-07 60.1 48 58.3
CiPaw.01G225800 Carya illinoinensis HOM05D000842 ORTHO05D000650 3.6e-07 59.7 90 36.7
Gohir.D01G037700 Gossypium hirsutum HOM05D000842 ORTHO05D000650 3.6e-07 59.7 73 41.1
Gorai.009G112800 Gossypium raimondii HOM05D000842 ORTHO05D000650 3.6e-07 59.7 66 42.4
Actinidia20149 Actinidia chinensis HOM05D001943 ORTHO05D001969 4.6e-07 59.3 75 46.7
HanXRQChr12g0381091 Helianthus annuus HOM05D001943 ORTHO05D001969 4.6e-07 59.3 41 61.0
MBI11_g02028_MAGBIO Magnolia biondii HOM05D001943 ORTHO05D001969 4.6e-07 59.3 47 66.0
SEGI_26230 Sequoiadendron giganteum HOM05D001943 ORTHO05D001969 4.6e-07 59.3 49 61.2
SEGI_40339 Sequoiadendron giganteum HOM05D001943 ORTHO05D001969 4.6e-07 59.3 49 61.2
TAR374G0444 Trochodendron aralioides HOM05D001943 ORTHO05D001969 4.6e-07 59.3 54 55.6
TAR375G0423 Trochodendron aralioides HOM05D001943 ORTHO05D001969 4.6e-07 59.3 44 63.6
FAN09G1652 Fragaria x ananassa HOM05D000842 ORTHO05D000650 6.1e-07 58.9 109 33.0
Potri.017G146700 Populus trichocarpa HOM05D001943 ORTHO05D001969 6.1e-07 58.9 48 58.3
arahy.Tifrunner.gnm1.ann1.Y57QNR Arachis hypogaea HOM05D000842 ORTHO05D000650 7.9e-07 58.5 66 47.0
Dinv43853 Davidia involucrata HOM05D001943 ORTHO05D001969 7.9e-07 58.5 48 60.4
Nn6g33282 Nelumbo nucifera HOM05D001943 ORTHO05D001969 7.9e-07 58.5 42 66.7
Solyc09g055700.4 Solanum lycopersicum HOM05D000842 ORTHO05D000650 7.9e-07 58.5 64 50.0
Migut.D00852 Erythranthe guttata HOM05D000842 ORTHO05D000650 1.0e-06 58.2 66 47.0
FAN14G1725 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.0e-06 58.2 109 33.0
Gohir.A01G047000 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.0e-06 58.2 73 39.7
Lsat_1_v5_gn_5_174501 Lactuca sativa HOM05D000842 ORTHO05D000650 1.0e-06 58.2 67 46.3
Rhsim09G0108200 Rhododendron simsii HOM05D000842 ORTHO05D000650 1.0e-06 58.2 88 34.1
CSS0029835 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 1.4e-06 57.8 73 45.2
FAN02G3656 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.4e-06 57.8 109 33.0
PGR102G2939 Punica granatum HOM05D000842 ORTHO05D000650 1.4e-06 57.8 67 44.8
Sabra16G0252400 Salix brachista HOM05D000842 ORTHO05D000650 1.4e-06 57.8 73 39.7
Sc03g0010740 Simmondsia chinensis HOM05D000842 ORTHO05D000650 1.4e-06 57.8 73 43.8
SGA_v2.0_scaffold60G21114 Striga asiatica HOM05D001943 ORTHO05D001969 1.4e-06 57.8 47 57.4
HPP92_026124 Vanilla planifolia HOM05D000842 ORTHO05D000650 1.4e-06 57.8 70 42.9
Hma1.2p1_1116F.1_g258940 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 1.8e-06 57.4 82 39.0
LjContig00141g0019488 Lotus japonicus HOM05D000842 ORTHO05D000650 1.8e-06 57.4 92 38.0
Aqoxy3G00304 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 2.3e-06 57.0 86 31.4
Peaxi162Scf00038g01435 Petunia axillaris HOM05D000842 ORTHO05D000650 2.3e-06 57.0 88 35.2
Potri.001G382700 Populus trichocarpa HOM05D000842 ORTHO05D000650 2.3e-06 57.0 73 39.7
Thecc.07G134900 Theobroma cacao HOM05D000842 ORTHO05D000650 2.3e-06 57.0 73 41.1
GSVIVG01019409001 Vitis vinifera HOM05D001943 ORTHO05D001969 2.3e-06 57.0 43 62.8
Atru.chr1.4096 Acer truncatum HOM05D000842 ORTHO05D000650 3.0e-06 56.6 73 37.0
Atru.chr8.779 Acer truncatum HOM05D000842 ORTHO05D000650 3.0e-06 56.6 73 37.0
Actinidia39116 Actinidia chinensis HOM05D000842 ORTHO05D000650 3.0e-06 56.6 86 34.9
AUR62013943 Chenopodium quinoa HOM05D000842 ORTHO05D000650 3.0e-06 56.6 73 41.1
Eucgr.B02221 Eucalyptus grandis HOM05D000842 ORTHO05D000650 3.0e-06 56.6 67 44.8
SalBow6G4852 Salvia bowleyana HOM05D000842 ORTHO05D000650 3.0e-06 56.6 73 38.4
Potri.005G040100 Populus trichocarpa HOM05D001943 ORTHO05D001969 3.9e-06 56.2 48 56.2
vmacro22857 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 3.9e-06 56.2 99 33.3
arahy.Tifrunner.gnm1.ann1.BXGR3K Arachis hypogaea HOM05D000842 ORTHO05D000650 5.1e-06 55.8 66 43.9
Lsat_1_v5_gn_8_6540 Lactuca sativa HOM05D001943 ORTHO05D001969 5.1e-06 55.8 39 61.5
Medtr5g072760 Medicago truncatula HOM05D000842 ORTHO05D000650 5.1e-06 55.8 92 34.8
Nitab4.5_0000046g0050 Nicotiana tabacum HOM05D000842 ORTHO05D000650 5.1e-06 55.8 69 43.5
Nitab4.5_0002420g0040 Nicotiana tabacum HOM05D001943 ORTHO05D001969 5.1e-06 55.8 42 57.1
Nitab4.5_0005281g0020 Nicotiana tabacum HOM05D000842 ORTHO05D000650 5.1e-06 55.8 88 34.1
Peaxi162Scf00037g01127 Petunia axillaris HOM05D001943 ORTHO05D001969 5.1e-06 55.8 43 55.8
vmacro16990 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 5.1e-06 55.8 80 37.5
ATR0121G006 Amborella trichopoda HOM05D000842 ORTHO05D000650 6.7e-06 55.5 67 40.3
Migut.D00973 Erythranthe guttata HOM05D000842 ORTHO05D000650 6.7e-06 55.5 80 37.5
Gohir.A02G115500 Gossypium hirsutum HOM05D000842 ORTHO05D000650 6.7e-06 55.5 80 36.2
Gohir.D03G056500 Gossypium hirsutum HOM05D000842 ORTHO05D000650 6.7e-06 55.5 80 36.2
Gorai.003G059600 Gossypium raimondii HOM05D000842 ORTHO05D000650 6.7e-06 55.5 80 36.2
HanXRQChr09g0265371 Helianthus annuus HOM05D001943 ORTHO05D001969 6.7e-06 55.5 46 54.3
Prupe.6G050600 Prunus persica HOM05D000842 ORTHO05D000650 6.7e-06 55.5 67 43.3
Rhsim12G0205300 Rhododendron simsii HOM05D000842 ORTHO05D000650 6.7e-06 55.5 80 37.5
unitig_736.g22784 Utricularia gibba HOM05D001943 ORTHO05D001969 6.7e-06 55.5 42 57.1
Atru.chr2.1899 Acer truncatum HOM05D000842 ORTHO05D000650 8.8e-06 55.1 67 41.8
CANSAT54G1405 Cannabis sativa HOM05D000842 ORTHO05D000650 8.8e-06 55.1 66 45.5
AUR62019667 Chenopodium quinoa HOM05D000842 ORTHO05D000650 8.8e-06 55.1 73 39.7
CsaV3_1G036640 Cucumis sativus L. HOM05D000842 ORTHO05D000650 8.8e-06 55.1 73 39.7
Oeu002510.1 Olea europaea HOM05D000842 ORTHO05D000650 8.8e-06 55.1 73 35.6
RcHm_v2.0_Chr2g0142861 Rosa chinensis HOM05D000842 ORTHO05D000650 8.8e-06 55.1 103 33.0
Solyc12g096540.2 Solanum lycopersicum HOM05D001943 ORTHO05D001969 8.8e-06 55.1 41 58.5
Sopen12g032370 Solanum pennellii HOM05D001943 ORTHO05D001969 8.8e-06 55.1 41 58.5
PGSC0003DMG402029274 Solanum tuberosum HOM05D001943 ORTHO05D001969 8.8e-06 55.1 41 58.5


User provided reference genes

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