Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3331 Trochodendron aralioides HOM05D002027 ORTHO05D004229 6.5e-82 307.4 158 100.0
TAR625G0172 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.4e-52 209.9 121 86.8
TAR374G0231 Trochodendron aralioides HOM05D002027 ORTHO05D004229 3.0e-47 192.2 116 82.8
TAR625G0926 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.5e-46 189.9 116 82.8
Dinv33435 Davidia involucrata HOM05D002027 ORTHO05D004229 7.0e-44 181.0 112 82.1
Peaxi162Scf00080g01317 Petunia axillaris HOM05D002027 ORTHO05D004229 5.9e-43 177.9 116 76.7
CSS0023947 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 1.7e-42 176.4 116 78.4
Manes.15G150400 Manihot esculenta HOM05D002027 ORTHO05D004229 5.0e-42 174.9 116 73.3
Nitab4.5_0002529g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 5.0e-42 174.9 116 74.1
PSO541G4249 Papaver somniferum HOM05D002027 ORTHO05D004229 5.0e-42 174.9 117 75.2
PSO541G4480 Papaver somniferum HOM05D002027 ORTHO05D004229 5.0e-42 174.9 117 75.2
TWI56G0726 Tripterygium wilfordii HOM05D002027 ORTHO05D004229 5.0e-42 174.9 117 72.6
PSO111G0085 Papaver somniferum HOM05D002027 ORTHO05D004229 6.5e-42 174.5 117 74.4
PSO754G0009 Papaver somniferum HOM05D002027 ORTHO05D004229 6.5e-42 174.5 117 74.4
TAR633G0456 Trochodendron aralioides HOM05D002027 ORTHO05D004229 8.5e-42 174.1 111 81.1
CAN.G1057.9 Capsicum annuum HOM05D002027 ORTHO05D004229 1.9e-41 172.9 116 74.1
GSVIVG01032392001 Vitis vinifera HOM05D002027 ORTHO05D004229 5.5e-41 171.4 112 75.0
PGSC0003DMG400006961 Solanum tuberosum HOM05D002027 ORTHO05D004229 9.5e-41 170.6 116 72.4
Solyc02g067870.3 Solanum lycopersicum HOM05D002027 ORTHO05D004229 1.2e-40 170.2 116 72.4
Cpa.g.c26638.2 Carica papaya HOM05D002027 ORTHO05D004229 1.6e-40 169.9 119 70.6
SGA_v2.0_scaffold18G08275 Striga asiatica HOM05D002027 ORTHO05D004229 1.6e-40 169.9 116 75.9
Actinidia36120 Actinidia chinensis HOM05D002027 ORTHO05D004229 2.1e-40 169.5 112 76.8
Nitab4.5_0001550g0100 Nicotiana tabacum HOM05D002027 ORTHO05D004229 2.1e-40 169.5 116 72.4
Sopen02g016990 Solanum pennellii HOM05D002027 ORTHO05D004229 2.1e-40 169.5 116 72.4
Ciclev10017779m.g Citrus clementina HOM05D002027 ORTHO05D004229 2.7e-40 169.1 116 71.6
Gohir.A07G223800 Gossypium hirsutum HOM05D002027 ORTHO05D004229 4.7e-40 168.3 112 72.3
COL.COLO4_29156 Corchorus olitorius HOM05D002027 ORTHO05D004229 8.0e-40 167.5 111 73.0
Hma1.2p1_1747F.1_g300460 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 8.0e-40 167.5 112 75.0
Hma1.2p1_2550F.1_g324240 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 8.0e-40 167.5 112 75.0
Aqoxy5G03756 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 1.0e-39 167.2 116 68.1
Prupe.3G292900 Prunus persica HOM05D002027 ORTHO05D004229 4.0e-39 165.2 112 74.1
Gohir.D07G230900 Gossypium hirsutum HOM05D002027 ORTHO05D004229 8.8e-39 164.1 112 71.4
Rhsim10G0015500 Rhododendron simsii HOM05D002027 ORTHO05D004229 3.4e-38 162.2 112 72.3
Oeu054624.1 Olea europaea HOM05D002027 ORTHO05D004229 5.7e-38 161.4 112 70.5
Rhsim10G0016600 Rhododendron simsii HOM05D002027 ORTHO05D004229 7.5e-38 161.0 112 71.4
Nitab4.5_0003318g0090 Nicotiana tabacum HOM05D002027 ORTHO05D004229 9.8e-38 160.6 110 73.6
Lju41A42G102 Lonicera japonica HOM05D002027 ORTHO05D004229 2.8e-37 159.1 112 70.5
Cc07_g01580 Coffea canephora HOM05D002027 ORTHO05D004229 3.7e-37 158.7 112 73.2
vmacro05869 Vaccinium macrocarpon HOM05D002027 ORTHO05D004229 3.7e-37 158.7 112 72.3
PSO754G0050 Papaver somniferum HOM05D002027 ORTHO05D004229 4.9e-37 158.3 119 68.1
Oeu018142.1 Olea europaea HOM05D002027 ORTHO05D004229 6.3e-37 157.9 112 69.6
PSO063G1117 Papaver somniferum HOM05D002027 ORTHO05D004229 1.1e-36 157.1 117 65.8
PSO111G0070 Papaver somniferum HOM05D002027 ORTHO05D004229 1.8e-36 156.4 115 69.6
MBI06_g16063_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D004229 3.1e-36 155.6 117 65.8
PGR142G2457 Punica granatum HOM05D002027 ORTHO05D004229 7.0e-36 154.5 112 66.1
Migut.H00065 Erythranthe guttata HOM05D002027 ORTHO05D004229 9.2e-36 154.1 117 69.2
Eucgr.I01736 Eucalyptus grandis HOM05D002027 ORTHO05D004229 3.5e-35 152.1 118 62.7
DCAR_021726 Daucus carota HOM05D002027 ORTHO05D004229 5.9e-35 151.4 111 66.7
Nn3g16699 Nelumbo nucifera HOM05D002027 ORTHO05D004229 1.3e-34 150.2 117 66.7
Nitab4.5_0001860g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 1.3e-34 150.2 114 70.2
TAR622G0767 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.1e-33 147.1 101 74.3
Cfa007348 Carpinus fangiana HOM05D002027 ORTHO05D004229 6.1e-32 141.4 116 61.2
Gorai.001G266000 Gossypium raimondii HOM05D002027 ORTHO05D004229 2.3e-31 139.4 112 64.3
Cfa007345 Carpinus fangiana HOM05D002027 ORTHO05D004229 3.0e-31 139.0 116 60.3
Aqoxy5G03754 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 4.0e-31 138.7 112 59.8
Cfa007350 Carpinus fangiana HOM05D002027 ORTHO05D004229 5.2e-31 138.3 116 58.6
Haze_14751 Corylus avellana HOM05D002027 ORTHO05D004229 1.2e-30 137.1 121 57.9
PGR142G3625 Punica granatum HOM05D002027 ORTHO05D004229 1.3e-29 133.7 116 58.6
ATR0824G228 Amborella trichopoda HOM05D002027 ORTHO05D004229 6.4e-29 131.3 116 56.0
HanXRQChr09g0255251 Helianthus annuus HOM05D002027 ORTHO05D004229 5.4e-28 128.3 112 58.9
ATR0751G184 Amborella trichopoda HOM05D002027 ORTHO05D004229 7.0e-28 127.9 116 50.0
CANSAT64G1847 Cannabis sativa HOM05D002027 ORTHO05D004229 1.3e-26 123.6 112 52.7
CDE08G0066 Ceratophyllum demersum HOM05D002027 ORTHO05D004229 3.9e-26 122.1 118 54.2
Lsat_1_v5_gn_4_184180 Lactuca sativa HOM05D002027 ORTHO05D004229 5.0e-26 121.7 112 57.1
Peaxi162Scf00129g01654 Petunia axillaris HOM05D002027 ORTHO05D004229 2.5e-25 119.4 87 70.1
ECA232G2124 Erigeron canadensis HOM05D002027 ORTHO05D004229 4.3e-25 118.6 112 50.9
Thecc.04G018400 Theobroma cacao HOM05D002027 ORTHO05D004229 4.4e-22 108.6 74 73.0
Hma1.2p1_2120F.1_g314440 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 9.2e-20 100.9 73 74.0
AagrBONN_evm.TU.Sc2ySwM_228.2504 Anthoceros agrestis HOM05D002027 ORTHO05D004229 3.9e-18 95.5 117 43.6
Pp3c11_25580 Physcomitrium patens HOM05D002027 ORTHO05D004229 1.9e-17 93.2 131 43.5
Dinv25731 Davidia involucrata HOM05D000001 ORTHO05D000003 2.5e-17 92.8 112 50.0
SEGI_28474 Sequoiadendron giganteum HOM05D002027 ORTHO05D004229 1.2e-16 90.5 123 41.5
FAN20G0815 Fragaria x ananassa HOM05D002027 ORTHO05D004229 1.6e-16 90.1 128 35.9
FvH4_2g23480 Fragaria vesca HOM05D002027 ORTHO05D004229 6.2e-16 88.2 123 36.6
FAN15G2640 Fragaria x ananassa HOM05D002027 ORTHO05D004229 6.2e-16 88.2 123 36.6
FAN24G0046 Fragaria x ananassa HOM05D002027 ORTHO05D004229 6.2e-16 88.2 123 36.6
FAN27G1909 Fragaria x ananassa HOM05D002027 ORTHO05D004229 6.2e-16 88.2 123 36.6
RcHm_v2.0_Chr6g0290951 Rosa chinensis HOM05D002027 ORTHO05D004229 2.3e-15 86.3 123 36.6
ECA248G3015 Erigeron canadensis HOM05D002027 ORTHO05D004229 5.8e-14 81.6 122 36.1
arahy.Tifrunner.gnm1.ann1.EWUD7T Arachis hypogaea HOM05D002027 ORTHO05D004229 9.8e-14 80.9 123 35.8
MD03G1263700 Malus domestica HOM05D002027 ORTHO05D004229 9.8e-14 80.9 130 34.6
MSTRG.21554 Avicennia marina HOM05D002027 ORTHO05D004229 1.7e-13 80.1 128 34.4
Prupe.8G240100 Prunus persica HOM05D002027 ORTHO05D004229 2.9e-13 79.3 123 34.1
QL12p021592 Quercus lobata HOM05D002027 ORTHO05D004229 2.9e-13 79.3 123 35.8
TPR.G9913 Trifolium pratense HOM05D002027 ORTHO05D004229 2.9e-13 79.3 131 34.4
VMungo1383G2240 Vigna mungo HOM05D002027 ORTHO05D004229 2.9e-13 79.3 123 35.8
Aqoxy2G03366 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 3.7e-13 79.0 120 35.0
Lsat_1_v5_gn_5_187880 Lactuca sativa HOM05D002027 ORTHO05D004229 3.7e-13 79.0 130 33.8
Phvul.001G152000 Phaseolus vulgaris HOM05D002027 ORTHO05D004229 6.4e-13 78.2 123 35.0
Psat0s4437g0040 Pisum sativum HOM05D002027 ORTHO05D004229 6.4e-13 78.2 131 34.4
arahy.Tifrunner.gnm1.ann1.EK6TEN Arachis hypogaea HOM05D002027 ORTHO05D004229 8.3e-13 77.8 123 34.1
Dinv32927 Davidia involucrata HOM05D002027 ORTHO05D004229 8.3e-13 77.8 131 34.4
CANSAT25G0400 Cannabis sativa HOM05D002027 ORTHO05D004229 1.1e-12 77.4 123 35.0
Ca_08605_v3 Cicer arietinum L. HOM05D002027 ORTHO05D004229 1.1e-12 77.4 131 34.4
Glyma.19G156900 Glycine max HOM05D002027 ORTHO05D004229 1.1e-12 77.4 123 34.1
Lalb_Chr01g0020131 Lupinus albus HOM05D002027 ORTHO05D004229 1.1e-12 77.4 123 34.1
Cc01_g19410 Coffea canephora HOM05D002027 ORTHO05D004229 1.4e-12 77.0 123 35.0
Cfa006149 Carpinus fangiana HOM05D002027 ORTHO05D004229 1.9e-12 76.6 142 31.7
Haze_04700 Corylus avellana HOM05D002027 ORTHO05D004229 1.9e-12 76.6 142 31.7
Sed0015956 Sechium edule HOM05D002027 ORTHO05D004229 2.4e-12 76.3 130 34.6
EL10Ac4g08964 Beta vulgaris HOM05D002027 ORTHO05D004229 3.2e-12 75.9 123 34.1
Lj1g0003544 Lotus japonicus HOM05D002027 ORTHO05D004229 3.2e-12 75.9 131 33.6
Medtr7g094980 Medicago truncatula HOM05D002027 ORTHO05D004229 3.2e-12 75.9 131 32.8
GSVIVG01001154001 Vitis vinifera HOM05D002027 ORTHO05D004229 3.2e-12 75.9 111 36.0
CiPaw.07G091100 Carya illinoinensis HOM05D002027 ORTHO05D004229 4.1e-12 75.5 131 34.4
Migut.D00305 Erythranthe guttata HOM05D002027 ORTHO05D004229 4.1e-12 75.5 120 32.5
HanXRQChr01g0003041 Helianthus annuus HOM05D002027 ORTHO05D004229 4.1e-12 75.5 130 31.5
Manes.05G077100 Manihot esculenta HOM05D002027 ORTHO05D004229 4.1e-12 75.5 131 32.8
Hund06892 Selenicereus undatus HOM05D002027 ORTHO05D004229 5.4e-12 75.1 123 33.3
Gohir.D08G204200 Gossypium hirsutum HOM05D002027 ORTHO05D004229 7.1e-12 74.7 131 31.3
Nn4g26280 Nelumbo nucifera HOM05D002027 ORTHO05D004229 7.1e-12 74.7 120 35.0
Nitab4.5_0008567g0020 Nicotiana tabacum HOM05D002027 ORTHO05D004229 7.1e-12 74.7 131 35.1
Oeu034963.2 Olea europaea HOM05D002027 ORTHO05D004229 7.1e-12 74.7 120 35.0
TAR365G0988 Trochodendron aralioides HOM05D002027 ORTHO05D004229 7.1e-12 74.7 123 33.3
ATR0332G016 Amborella trichopoda HOM05D002027 ORTHO05D004229 9.2e-12 74.3 115 35.7
DCAR_002729 Daucus carota HOM05D002027 ORTHO05D004229 9.2e-12 74.3 154 30.5
Gohir.A08G186100 Gossypium hirsutum HOM05D002027 ORTHO05D004229 9.2e-12 74.3 131 31.3
TWI59G0219 Tripterygium wilfordii HOM05D002027 ORTHO05D004229 9.2e-12 74.3 123 34.1
ClCG09G007090 Citrullus lanatus HOM05D002027 ORTHO05D004229 1.2e-11 73.9 113 37.2
CsaV3_7G028080 Cucumis sativus L. HOM05D002027 ORTHO05D004229 1.2e-11 73.9 130 33.8
Gorai.004G216200 Gossypium raimondii HOM05D002027 ORTHO05D004229 1.2e-11 73.9 114 33.3
MELO3C015829.2 Cucumis melo HOM05D002027 ORTHO05D004229 1.6e-11 73.6 113 36.3
MBI04_g29619_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D004229 1.6e-11 73.6 131 32.1
PGR044G2334 Punica granatum HOM05D002027 ORTHO05D004229 1.6e-11 73.6 131 32.8
Nitab4.5_0000759g0170 Nicotiana tabacum HOM05D002027 ORTHO05D004229 2.1e-11 73.2 131 34.4
Glyma.03G154600 Glycine max HOM05D002027 ORTHO05D004229 2.7e-11 72.8 123 32.5
Lj1C47T3 Lonicera japonica HOM05D002027 ORTHO05D004229 2.7e-11 72.8 131 33.6
SGA_v2.0_scaffold1G00486 Striga asiatica HOM05D002027 ORTHO05D004229 4.6e-11 72.0 131 30.5
CAN.G1549.5 Capsicum annuum HOM05D002027 ORTHO05D004229 6.0e-11 71.6 131 31.3
Atru.chr5.1449 Acer truncatum HOM05D002027 ORTHO05D004229 7.8e-11 71.2 130 30.8
PSO210G3475 Papaver somniferum HOM05D002027 ORTHO05D004229 7.8e-11 71.2 130 32.3
vmacro02577 Vaccinium macrocarpon HOM05D002027 ORTHO05D004229 7.8e-11 71.2 132 32.6
Ciclev10021543m.g Citrus clementina HOM05D002027 ORTHO05D004229 1.0e-10 70.9 130 32.3
PGSC0003DMG400020127 Solanum tuberosum HOM05D002027 ORTHO05D004229 1.3e-10 70.5 131 32.8
CSS0025689 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 1.7e-10 70.1 132 30.3
AUR62036022 Chenopodium quinoa HOM05D002027 ORTHO05D004229 1.7e-10 70.1 123 32.5
Eucgr.K03363 Eucalyptus grandis HOM05D002027 ORTHO05D004229 1.7e-10 70.1 131 31.3
PSO170G4994 Papaver somniferum HOM05D002027 ORTHO05D004229 1.7e-10 70.1 130 31.5
Peaxi162Scf00783g00216 Petunia axillaris HOM05D002027 ORTHO05D004229 1.7e-10 70.1 128 32.8
Potri.002G052200 Populus trichocarpa HOM05D002027 ORTHO05D004229 1.7e-10 70.1 131 31.3
Gorai.004G216800 Gossypium raimondii HOM05D002027 ORTHO05D004229 2.3e-10 69.7 113 31.9
Sabra02G0042300 Salix brachista HOM05D002027 ORTHO05D004229 2.3e-10 69.7 131 31.3
COL.COLO4_09084 Corchorus olitorius HOM05D002027 ORTHO05D004229 3.0e-10 69.3 128 31.2
CSS0033900 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 3.9e-10 68.9 115 32.2
AUR62004806 Chenopodium quinoa HOM05D002027 ORTHO05D004229 3.9e-10 68.9 123 31.7
Solyc06g084260.3 Solanum lycopersicum HOM05D002027 ORTHO05D004229 3.9e-10 68.9 131 31.3
Sopen06g035650 Solanum pennellii HOM05D002027 ORTHO05D004229 3.9e-10 68.9 131 31.3
THA.LOC104802230 Tarenaya hassleriana HOM05D002027 ORTHO05D004229 3.9e-10 68.9 114 33.3
Thecc.01G277600 Theobroma cacao HOM05D002027 ORTHO05D004229 3.9e-10 68.9 131 32.8
CSS0032324 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 5.1e-10 68.6 38 84.2
Duzib133G1246 Durio zibethinus HOM05D002027 ORTHO05D004229 6.6e-10 68.2 131 31.3
Cpa.g.sc52.42 Carica papaya HOM05D002027 ORTHO05D004229 8.6e-10 67.8 114 33.3
Gohir.D08G204766 Gossypium hirsutum HOM05D002027 ORTHO05D004229 8.6e-10 67.8 113 31.0
Ah.04g163040 Amaranthus hybridus HOM05D002027 ORTHO05D004229 1.1e-09 67.4 122 31.1
Aa31LG10G17000 Aethionema arabicum HOM05D002027 ORTHO05D004229 1.9e-09 66.6 112 32.1
SalBow4G0768 Salvia bowleyana HOM05D002027 ORTHO05D004229 1.9e-09 66.6 114 31.6
SMO352G0006 Selaginella moellendorffii HOM05D002027 ORTHO05D004229 1.9e-09 66.6 128 33.6
PSO832G3286 Papaver somniferum HOM05D002027 ORTHO05D004229 4.3e-09 65.5 44 72.7
Sp5g00360 Schrenkiella parvula HOM05D002027 ORTHO05D004229 4.3e-09 65.5 112 32.1
Actinidia00758 Actinidia chinensis HOM05D002027 ORTHO05D004229 5.6e-09 65.1 132 31.1
Thhalv10006140m.g Eutrema salsugineum HOM05D002027 ORTHO05D004229 7.3e-09 64.7 112 32.1
Os07g0571600 Oryza sativa ssp. japonica HOM05D002027 ORTHO05D004229 7.3e-09 64.7 123 32.5
A09p54970 Brassica napus HOM05D002027 ORTHO05D004229 1.2e-08 63.9 131 29.8
AT3G63170 Arabidopsis thaliana HOM05D002027 ORTHO05D004229 2.8e-08 62.8 131 28.2
CDE10G1045 Ceratophyllum demersum HOM05D002027 ORTHO05D004229 2.8e-08 62.8 116 30.2
Rhsim13G0025700 Rhododendron simsii HOM05D002027 ORTHO05D004229 2.8e-08 62.8 128 31.2
BcaC07g40795 Brassica carinata HOM05D002027 ORTHO05D004229 3.6e-08 62.4 112 31.2
C08p37880 Brassica napus HOM05D002027 ORTHO05D004229 3.6e-08 62.4 112 31.2
BolC8t51366H Brassica oleracea HOM05D002027 ORTHO05D004229 3.6e-08 62.4 112 31.2
BraA04t15743Z Brassica rapa HOM05D002027 ORTHO05D004229 3.6e-08 62.4 112 30.4
Mapoly0058s0114 Marchantia polymorpha HOM05D002027 ORTHO05D007928 8.1e-08 61.2 115 32.2
CARHR173490 Cardamine hirsuta HOM05D002027 ORTHO05D004229 1.1e-07 60.8 115 29.6
A04p00240 Brassica napus HOM05D002027 ORTHO05D004229 1.4e-07 60.5 112 29.5
C04p30060 Brassica napus HOM05D002027 ORTHO05D004229 1.8e-07 60.1 112 29.5
BolC4t24538H Brassica oleracea HOM05D002027 ORTHO05D004229 1.8e-07 60.1 112 29.5
BcaC02g10350 Brassica carinata HOM05D002027 ORTHO05D004229 2.3e-07 59.7 112 29.5
SalBow1G5926 Salvia bowleyana HOM05D002027 ORTHO05D004229 2.3e-07 59.7 52 59.6
AL5G46010 Arabidopsis lyrata HOM05D002027 ORTHO05D004229 6.8e-07 58.2 112 29.5
Carub.0005s2984 Capsella rubella HOM05D002027 ORTHO05D004229 1.5e-06 57.0 112 28.6
unitig_0.g1140 Utricularia gibba HOM05D002027 ORTHO05D004229 2.0e-06 56.6 94 29.8
HPP92_001617 Vanilla planifolia HOM05D002027 ORTHO05D004229 4.4e-06 55.5 123 32.5


User provided reference genes

Program Settings