Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.2e-138 496.5 258 100.0
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.3e-103 380.2 258 78.7
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 1.6e-77 293.5 251 66.1
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 1.5e-75 287.0 248 65.7
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 5.8e-72 275.0 248 62.9
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 2.2e-71 273.1 258 60.9
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 2.9e-71 272.7 252 62.3
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 6.4e-71 271.6 249 62.7
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 4.2e-70 268.9 248 60.1
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 3.3e-67 259.2 251 57.4
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 2.1e-66 256.5 251 60.6
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.8e-65 253.4 249 57.8
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 9.9e-64 247.7 248 59.7
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 4.9e-63 245.4 250 59.2
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.4e-62 243.8 247 56.7
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.4e-62 243.8 247 56.7
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 4.2e-62 242.3 248 58.1
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.7e-61 239.6 248 57.7
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.3e-60 236.5 254 56.7
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 6.7e-60 235.0 251 57.0
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 1.1e-59 234.2 251 55.8
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.5e-59 233.8 252 56.3
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 3.3e-59 232.6 248 56.5
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 4.3e-59 232.3 254 56.3
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 4.3e-59 232.3 251 56.2
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 8.1e-58 228.0 251 56.2
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 6.9e-57 224.9 250 55.2
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 1.3e-55 220.7 282 50.4
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 2.2e-55 219.9 253 52.6
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 2.9e-55 219.5 249 53.0
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.1e-54 217.6 248 55.2
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 5.5e-54 215.3 250 54.8
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 1.2e-53 214.2 251 51.8
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 1.0e-52 211.1 254 53.1
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 1.3e-52 210.7 253 49.4
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.8e-52 210.3 252 52.0
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 1.8e-52 210.3 258 51.9
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 2.3e-52 209.9 253 49.4
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 2.3e-52 209.9 258 51.9
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 3.0e-52 209.5 252 53.2
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.1e-52 208.8 252 52.0
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.1e-52 208.8 252 52.0
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 1.1e-51 207.6 252 52.0
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.5e-51 206.5 265 47.5
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 2.8e-50 203.0 248 51.6
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 1.8e-49 200.3 248 51.6
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.4e-49 199.9 252 51.2
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.3e-49 198.7 252 50.4
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 5.3e-49 198.7 250 49.2
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 2.6e-48 196.4 247 52.6
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 3.4e-48 196.1 192 59.4
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 3.4e-48 196.1 247 52.2
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 1.0e-47 194.5 247 51.8
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.2e-47 193.4 251 49.0
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 2.9e-47 193.0 249 50.2
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 8.4e-47 191.4 247 51.0
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 8.4e-47 191.4 247 52.6
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.4e-46 190.7 251 49.0
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 1.4e-46 190.7 247 52.6
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.9e-46 190.3 247 51.0
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 4.2e-46 189.1 254 49.2
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 4.2e-46 189.1 254 49.2
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 4.2e-46 189.1 256 48.8
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 5.5e-46 188.7 247 53.4
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 5.5e-46 188.7 250 49.2
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 1.6e-45 187.2 250 49.2
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 1.6e-45 187.2 248 49.6
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 2.1e-45 186.8 249 46.2
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 1.3e-44 184.1 248 48.8
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 1.3e-44 184.1 270 44.4
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 1.8e-44 183.7 248 48.8
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.0e-44 183.0 254 46.5
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 3.0e-44 183.0 255 48.6
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 8.7e-44 181.4 249 49.4
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 1.5e-43 180.6 248 46.8
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.5e-43 180.6 248 47.6
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 1.9e-43 180.3 251 47.0
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 9.7e-43 177.9 254 48.4
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 1.6e-42 177.2 251 47.4
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 4.8e-42 175.6 251 45.4
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 4.8e-42 175.6 206 53.4
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.4e-41 174.1 248 48.4
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.4e-41 174.1 248 48.4
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 2.4e-41 173.3 250 46.4
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 1.5e-40 170.6 252 44.4
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 2.0e-40 170.2 251 47.0
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 5.5e-38 162.2 249 43.8
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 7.2e-38 161.8 249 47.0
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 4.6e-37 159.1 247 42.1
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 3.0e-36 156.4 265 44.9
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.5e-35 154.1 171 55.6
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.7e-34 150.6 254 41.3
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 2.2e-34 150.2 254 40.9
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 5.3e-33 145.6 257 40.5
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 6.9e-33 145.2 252 41.7
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 6.9e-33 145.2 252 41.7
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 1.2e-32 144.4 250 41.2
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 1.5e-32 144.1 250 41.2
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 7.7e-32 141.7 249 39.8
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 1.6e-29 134.0 199 47.2
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 1.6e-29 134.0 249 40.2
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.8e-28 130.6 201 46.3
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 2.3e-28 130.2 256 36.3
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 3.0e-28 129.8 139 59.7
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 2.6e-27 126.7 253 36.4
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.6e-27 126.7 251 39.4
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 4.8e-26 122.5 212 38.2
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 5.3e-25 119.0 263 34.2
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 7.0e-25 118.6 258 34.5
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.2e-24 117.9 216 36.6
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 3.3e-19 99.8 247 33.6
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 4.4e-19 99.4 160 42.5
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 3.4e-11 73.2 136 43.4
BcaB08g35657 Brassica carinata HOM05D005720 ORTHO05D006984 1.7e-10 70.9 180 36.7
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.8e-10 69.3 58 60.3
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 5.4e-09 65.9 56 58.9
Actinidia34180 Actinidia chinensis HOM05D005720 ORTHO05D006984 8.5e-07 58.5 124 37.9


User provided reference genes

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