Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.4e-243 845.9 434 100.0
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.8e-188 662.1 433 79.9
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 4.4e-181 638.3 414 80.9
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.6e-178 629.8 386 82.9
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.7e-177 626.3 438 75.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 5.6e-176 621.3 398 79.9
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 9.5e-176 620.5 396 80.3
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 5.2e-174 614.8 441 73.7
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 2.6e-173 612.5 411 77.9
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 4.9e-172 608.2 387 80.4
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 8.3e-172 607.4 383 80.4
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.4e-171 606.7 418 74.4
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.7e-169 599.7 417 73.1
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.0e-169 599.0 398 77.6
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.9e-168 596.3 444 71.2
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.9e-168 596.3 380 78.2
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.6e-168 594.7 393 76.8
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 7.3e-168 594.3 389 77.1
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.1e-166 590.5 398 76.4
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 4.4e-165 585.1 438 70.1
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 4.4e-165 585.1 402 74.6
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.9e-164 582.4 380 77.9
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 4.9e-164 581.6 385 76.1
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 4.9e-164 581.6 404 73.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 6.4e-164 581.3 384 77.1
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.1e-163 580.5 391 76.0
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.9e-163 579.7 391 76.0
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.9e-163 579.7 398 75.1
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 3.2e-163 578.9 377 78.2
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.2e-163 578.9 384 76.8
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.2e-163 577.4 444 69.4
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.1e-162 576.2 397 75.1
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.6e-162 575.1 380 76.8
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 8.6e-161 570.9 360 80.6
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.1e-160 570.5 402 72.6
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.5e-160 570.1 404 72.3
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.5e-160 569.3 425 69.6
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.5e-160 567.4 450 67.3
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.6e-159 566.6 391 74.4
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.6e-159 566.6 402 72.9
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 3.6e-159 565.5 402 73.4
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.8e-158 563.1 402 71.9
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.2e-158 561.6 447 67.3
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 6.8e-158 561.2 401 71.3
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.0e-157 559.7 423 69.7
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 5.8e-157 558.1 448 67.4
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.5e-157 557.8 437 68.2
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.5e-157 557.8 434 68.4
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.3e-156 557.0 403 72.2
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.7e-156 556.6 423 70.4
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.2e-156 556.2 437 68.4
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.9e-155 553.1 403 72.2
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 9.2e-155 550.8 402 70.9
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 1.2e-154 550.4 436 67.4
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.2e-154 550.4 436 68.1
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 2.1e-154 549.7 379 74.1
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 2.1e-154 549.7 401 70.8
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.7e-154 549.3 437 67.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 4.6e-154 548.5 401 69.8
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 4.6e-154 548.5 395 73.2
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.0e-154 548.1 390 71.8
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-153 547.4 396 70.7
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 5.1e-153 545.0 469 62.7
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 8.6e-153 544.3 401 70.3
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.9e-152 543.1 351 80.3
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 7.3e-152 541.2 371 74.1
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.1e-151 539.7 416 69.5
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 3.6e-151 538.9 418 68.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.2e-151 538.1 333 81.4
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.2e-151 538.1 497 61.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.4e-150 537.0 446 66.6
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.2e-149 533.9 359 75.8
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.5e-149 533.5 418 68.7
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.6e-149 532.7 333 80.8
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 5.8e-149 531.6 371 73.6
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 2.2e-148 529.6 408 68.4
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 5.4e-147 525.0 408 67.2
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.6e-146 523.5 412 67.5
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 4.6e-138 495.4 440 60.5
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.5e-136 489.6 404 64.6
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 3.4e-133 479.2 438 60.5
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 3.4e-133 479.2 445 59.1
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.2e-131 472.2 442 58.6
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 4.2e-131 472.2 367 65.7
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 1.3e-129 467.2 375 64.5
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 4.5e-125 452.2 463 56.8
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.7e-124 450.3 325 72.0
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 3.8e-124 449.1 374 63.6
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.1e-123 447.6 483 55.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 4.6e-122 442.2 462 56.1
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 3.3e-120 436.0 439 57.2
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 4.3e-120 435.6 442 58.1
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 9.6e-120 434.5 447 56.8
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 9.6e-120 434.5 408 59.8
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 4.8e-119 432.2 448 56.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.1e-118 431.0 455 56.3
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 3.1e-118 429.5 324 68.8
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 6.5e-116 421.8 324 67.9
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 6.5e-108 395.2 406 55.7
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 6.5e-108 395.2 406 55.7
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.4e-105 387.5 444 51.6
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.0e-105 386.3 441 52.6
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.0e-105 386.3 441 52.6
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 3.9e-105 386.0 447 49.9
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 9.1e-94 348.2 223 78.9
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 2.9e-92 343.2 375 53.6
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.0e-86 322.0 284 62.7
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 6.1e-82 308.9 215 70.2
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 5.4e-70 269.2 360 41.9
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 6.8e-65 252.3 160 82.5
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 6.8e-57 225.7 382 38.2
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.6e-53 214.5 389 35.7
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.0e-53 214.2 139 78.4
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 6.2e-50 202.6 407 37.3
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 4.3e-43 179.9 116 79.3
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 9.5e-43 178.7 124 75.8
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 2.8e-42 177.2 141 63.8
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.6e-42 176.8 117 76.9
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.1e-41 173.7 384 36.2
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 4.0e-41 173.3 235 48.5
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.1e-35 155.2 122 64.8
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.8e-26 124.0 194 39.7
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.8e-26 124.0 329 32.2
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 2.2e-23 114.4 126 53.2
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 1.9e-22 111.3 78 74.4
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 3.5e-21 107.1 79 68.4
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 1.2e-13 82.0 235 29.4
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.6e-11 72.4 48 70.8
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 2.1e-10 71.2 423 25.5
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 2.8e-10 70.9 401 23.9
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 4.5e-08 63.5 408 23.0
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.3e-07 62.0 420 23.6
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.2e-07 61.2 382 23.8
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 6.5e-07 59.7 268 25.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.4e-06 58.5 268 24.3
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 2.5e-06 57.8 277 23.5
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.2e-06 57.0 64 45.3
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 4.2e-06 57.0 392 21.4
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 5.5e-06 56.6 429 22.4
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 7.1e-06 56.2 378 21.2
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 7.1e-06 56.2 330 24.5
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 9.3e-06 55.8 277 23.5
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 9.3e-06 55.8 276 25.0
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 9.3e-06 55.8 353 24.6


User provided reference genes

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