Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 1.3e-122 443.0 214 100.0
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 1.4e-82 310.1 188 81.4
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 6.1e-67 258.1 184 70.1
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 1.0e-66 257.3 185 68.1
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 1.8e-66 256.5 191 68.6
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 1.8e-66 256.5 180 69.4
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 2.3e-66 256.1 190 68.4
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 4.0e-66 255.4 185 68.1
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 5.2e-66 255.0 185 67.6
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 8.8e-66 254.2 196 67.9
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 7.5e-65 251.1 185 67.6
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 1.7e-64 250.0 185 67.0
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 6.3e-64 248.1 184 65.8
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 1.8e-63 246.5 185 67.6
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 2.4e-63 246.1 185 65.9
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 4.1e-63 245.4 193 64.2
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 3.5e-62 242.3 187 63.1
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.0e-61 240.7 187 63.6
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 2.2e-61 239.6 187 64.2
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 6.5e-61 238.0 188 64.4
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 1.1e-60 237.3 185 63.2
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 5.5e-60 235.0 187 62.6
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 5.5e-60 235.0 188 63.3
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 1.2e-59 233.8 187 62.6
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 2.1e-59 233.0 185 60.5
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 2.1e-59 233.0 193 61.7
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 2.1e-59 233.0 193 61.7
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 4.7e-59 231.9 187 61.0
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 6.1e-59 231.5 192 60.4
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 6.1e-59 231.5 192 61.5
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 2.3e-58 229.6 187 61.5
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 3.0e-58 229.2 187 62.0
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 4.0e-58 228.8 187 62.6
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 4.0e-58 228.8 187 62.6
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 2.0e-57 226.5 187 61.5
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 3.4e-57 225.7 194 57.7
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 3.4e-57 225.7 184 62.5
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 4.4e-57 225.3 186 62.4
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 4.4e-57 225.3 185 61.6
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 7.5e-57 224.6 187 58.8
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 9.8e-57 224.2 185 63.2
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 1.7e-56 223.4 187 61.0
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 1.7e-56 223.4 185 61.1
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 2.8e-56 222.6 187 59.9
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 2.8e-56 222.6 187 58.3
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 8.3e-56 221.1 190 58.4
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 1.8e-55 219.9 191 58.6
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 2.4e-55 219.5 191 58.6
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.4e-55 219.5 187 59.9
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 3.1e-55 219.2 186 57.5
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 4.1e-55 218.8 189 58.7
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 4.1e-55 218.8 189 58.7
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 4.1e-55 218.8 189 58.7
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 5.4e-55 218.4 188 55.9
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 7.0e-55 218.0 191 61.3
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 1.2e-54 217.2 186 57.5
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 3.5e-54 215.7 183 55.7
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 4.5e-54 215.3 187 55.6
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 5.9e-54 214.9 186 57.0
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 7.7e-54 214.5 183 56.3
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.0e-53 214.2 187 58.3
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 1.0e-53 214.2 186 58.6
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 1.7e-53 213.4 187 57.8
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 1.7e-53 213.4 188 59.6
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 3.8e-53 212.2 185 57.8
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 8.5e-53 211.1 192 56.8
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 1.5e-52 210.3 189 57.1
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 1.5e-52 210.3 193 55.4
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 9.4e-52 207.6 188 55.3
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 9.4e-52 207.6 249 45.4
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 9.4e-52 207.6 249 45.4
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 1.2e-51 207.2 195 53.3
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 1.2e-51 207.2 192 56.2
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 1.6e-51 206.8 191 53.4
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 3.6e-51 205.7 192 56.2
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 1.0e-50 204.1 187 56.1
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 1.2e-49 200.7 188 53.2
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 2.6e-49 199.5 187 55.1
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 2.6e-49 199.5 189 52.9
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 5.7e-49 198.4 185 54.6
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 9.8e-49 197.6 191 52.4
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.7e-48 196.8 187 55.6
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 2.2e-48 196.4 163 63.8
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.8e-47 193.4 188 52.7
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.4e-47 193.0 184 55.4
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.4e-47 193.0 184 55.4
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 7.0e-47 191.4 187 52.9
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 1.2e-46 190.7 186 49.5
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 2.0e-46 189.9 198 49.0
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 1.5e-44 183.7 196 53.1
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 3.4e-41 172.6 207 49.3
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 7.5e-41 171.4 205 46.3
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 2.2e-40 169.9 190 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 2.5e-36 156.4 241 39.4
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 4.9e-32 142.1 140 52.9
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 2.0e-30 136.7 190 42.6
CDE11G0272 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 5.8e-17 92.0 109 45.9
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 1.3e-16 90.9 200 33.0
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 6.4e-16 88.6 81 55.6
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 1.2e-14 84.3 203 34.0
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 1.8e-10 70.5 41 73.2
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 9.3e-07 58.2 51 54.9


User provided reference genes

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