Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3239 Trochodendron aralioides HOM05D003962 ORTHO05D004714 8.8e-132 473.8 265 100.0
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 3.5e-88 328.9 250 76.8
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 3.4e-67 259.2 250 61.2
Nn3g19007 Nelumbo nucifera HOM05D003962 ORTHO05D004714 1.1e-65 254.2 250 62.0
TAR375G1118 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.6e-56 223.8 239 64.0
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 1.0e-55 221.1 241 62.2
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.3e-45 187.6 258 52.3
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 5.3e-44 182.2 258 53.9
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 1.7e-42 177.2 175 64.6
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 1.2e-40 171.0 254 52.4
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 4.0e-36 156.0 254 50.0
vmacro11360 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 4.9e-34 149.1 271 46.5
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 7.1e-33 145.2 251 47.4
vmacro11466 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.7e-32 143.3 265 46.8
PSO170G0250 Papaver somniferum HOM05D003962 ORTHO05D004714 9.6e-30 134.8 250 47.2
PSO063G5170 Papaver somniferum HOM05D003962 ORTHO05D004714 1.3e-29 134.4 250 46.8
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 1.2e-27 127.9 262 43.9
MBI06_g08468_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 2.6e-27 126.7 250 44.8
CiPaw.06G010000 Carya illinoinensis HOM05D003962 ORTHO05D004714 3.5e-24 116.3 217 44.2
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 4.6e-24 115.9 314 39.5
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 2.3e-23 113.6 248 41.1
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 2.3e-23 113.6 170 49.4
Lsat_1_v5_gn_3_10880 Lactuca sativa HOM05D003962 ORTHO05D004714 3.9e-23 112.8 264 40.5
Cpa.g.sc3.71 Carica papaya HOM05D003962 ORTHO05D004714 1.9e-22 110.5 99 62.6
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 2.5e-22 110.2 265 40.8
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 5.7e-22 109.0 170 47.1
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 5.7e-22 109.0 186 47.8
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.7e-21 106.3 140 52.1
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 3.7e-21 106.3 140 52.1
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.1e-20 104.8 273 41.0
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 2.4e-20 103.6 272 38.6
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 2.4e-20 103.6 283 37.5
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 9.0e-20 101.7 257 36.6
Duzib068G0757 Durio zibethinus HOM05D003962 ORTHO05D004714 2.0e-19 100.5 108 60.2
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 3.4e-19 99.8 277 41.5
MD01G1219900 Malus domestica HOM05D003962 ORTHO05D004714 1.3e-18 97.8 169 44.4
THA.LOC104800296 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 2.2e-18 97.1 101 54.5
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 3.8e-18 96.3 147 50.3
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 3.8e-18 96.3 132 49.2
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 5.0e-18 95.9 221 39.8
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 1.1e-17 94.7 279 33.7
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 1.9e-17 94.0 182 48.9
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.9e-17 94.0 277 38.6
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.9e-17 94.0 277 38.6
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 2.5e-17 93.6 104 53.8
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 3.2e-17 93.2 172 41.3
unitig_0.g2842 Utricularia gibba HOM05D003962 ORTHO05D004714 4.2e-17 92.8 247 40.9
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 1.6e-16 90.9 218 38.5
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.6e-16 89.7 268 35.4
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.0e-15 88.2 192 39.6
Duzib084G0525 Durio zibethinus HOM05D003962 ORTHO05D004714 1.4e-15 87.8 220 38.6
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 1.4e-15 87.8 102 55.9
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 1.4e-15 87.8 263 37.6
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 8.8e-15 85.1 100 49.0
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 2.0e-14 84.0 277 37.9
Sp6g15570 Schrenkiella parvula HOM05D003962 ORTHO05D004714 2.0e-14 84.0 131 42.7
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 2.0e-14 84.0 187 38.0
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 2.5e-14 83.6 169 43.2
Oeu058004.1 Olea europaea HOM05D003962 ORTHO05D004714 2.2e-13 80.5 272 40.1
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 3.7e-13 79.7 237 35.0
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 3.7e-13 79.7 171 42.1
MELO3C005882.2 Cucumis melo HOM05D003962 ORTHO05D004714 4.8e-13 79.3 175 40.6
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 4.8e-13 79.3 169 42.0
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 8.2e-13 78.6 234 33.3
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 3.1e-12 76.6 122 43.4
SHI02387 Sapria himalayana HOM05D003962 ORTHO05D004714 3.1e-12 76.6 184 39.1
CDE02G1812 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 5.3e-12 75.9 181 37.6
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 5.3e-12 75.9 262 35.9
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 9.1e-12 75.1 281 35.9
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 1.2e-11 74.7 205 37.1
AUR62019379 Chenopodium quinoa HOM05D003962 ORTHO05D004714 3.4e-11 73.2 259 36.7
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 7.7e-11 72.0 169 38.5
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 1.3e-10 71.2 215 35.8
Phvul.009G053600 Phaseolus vulgaris HOM05D003962 ORTHO05D004714 2.2e-10 70.5 196 36.2
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 2.9e-10 70.1 147 42.2
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 2.9e-10 70.1 263 33.8
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 5.0e-10 69.3 262 36.3
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 1.1e-09 68.2 76 61.8
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 1.1e-09 68.2 262 36.3
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.4e-09 67.8 55 69.1
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 2.5e-09 67.0 266 34.6
EL10Ac3g05299 Beta vulgaris HOM05D003962 ORTHO05D004714 4.2e-09 66.2 259 34.0
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 4.2e-09 66.2 183 38.8
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 4.2e-09 66.2 191 36.1
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 5.5e-09 65.9 259 35.9
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 5.5e-09 65.9 199 38.2
unitig_88.g27643 Utricularia gibba HOM05D003962 ORTHO05D004714 2.1e-08 63.9 145 40.0
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 2.7e-08 63.5 273 33.0
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 3.0e-07 60.1 183 36.1
Gorai.007G015100 Gossypium raimondii HOM05D003962 ORTHO05D004714 8.8e-07 58.5 144 38.2
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 1.1e-06 58.2 207 38.6
THA.LOC104825141 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 1.1e-06 58.2 222 30.2
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 1.5e-06 57.8 175 36.0
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 1.5e-06 57.8 173 35.8
Sc25g0000880 Simmondsia chinensis HOM05D003962 ORTHO05D004714 2.6e-06 57.0 273 29.7


User provided reference genes

Program Settings