Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 7.6e-155 550.4 272 100.0
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 2.9e-138 495.4 272 88.6
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 4.6e-120 434.9 268 79.5
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 5.1e-119 431.4 272 75.0
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 1.9e-118 429.5 240 86.2
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 3.3e-118 428.7 269 77.7
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 5.7e-118 427.9 277 76.2
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 1.6e-117 426.4 272 73.5
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 3.7e-117 425.2 274 75.5
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 1.1e-116 423.7 272 76.1
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 4.1e-116 421.8 279 74.6
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 5.3e-116 421.4 272 75.7
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 9.0e-116 420.6 272 72.8
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 3.4e-115 418.7 276 73.2
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 5.9e-115 417.9 274 73.0
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 1.0e-114 417.2 278 73.4
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 1.3e-114 416.8 272 74.3
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.9e-113 412.9 274 74.1
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 2.5e-113 412.5 275 72.7
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 3.2e-113 412.1 274 72.6
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 4.2e-113 411.8 274 73.4
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 4.2e-113 411.8 272 74.6
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 5.5e-113 411.4 270 74.4
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 5.5e-113 411.4 272 73.2
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 7.2e-113 411.0 271 73.4
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 9.3e-113 410.6 274 71.2
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 2.7e-112 409.1 274 73.7
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 6.1e-112 407.9 272 71.3
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 2.3e-111 406.0 277 72.2
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 2.3e-111 406.0 274 71.2
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 3.9e-111 405.2 276 70.7
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 3.9e-111 405.2 278 70.9
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 5.1e-111 404.8 272 72.4
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 5.1e-111 404.8 274 70.1
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 1.1e-110 403.7 272 71.7
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 1.5e-110 403.3 273 71.1
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 4.3e-110 401.7 272 71.7
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 7.4e-110 401.0 272 72.1
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 9.7e-110 400.6 277 71.1
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 1.3e-109 400.2 276 71.7
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 1.3e-109 400.2 276 69.6
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 1.6e-109 399.8 272 72.4
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 1.6e-109 399.8 275 70.5
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 6.3e-109 397.9 272 68.8
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 8.2e-109 397.5 272 71.7
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 1.1e-108 397.1 270 72.2
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-108 396.7 276 71.0
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.8e-108 396.4 276 71.0
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 1.8e-108 396.4 272 69.5
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 1.8e-108 396.4 276 69.2
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 1.8e-108 396.4 276 68.8
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 2.4e-108 396.0 272 72.1
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 4.1e-108 395.2 272 68.4
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 9.0e-108 394.0 272 69.1
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 1.2e-107 393.7 270 71.1
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 2.6e-107 392.5 274 68.6
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 5.9e-107 391.3 279 71.0
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 1.7e-106 389.8 270 71.5
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 1.4e-105 386.7 276 66.7
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 1.9e-105 386.3 272 68.0
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.5e-105 386.0 272 68.4
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 3.2e-105 385.6 274 68.6
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 4.2e-105 385.2 273 69.6
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 7.2e-105 384.4 273 68.9
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 9.4e-105 384.0 277 68.6
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 9.4e-105 384.0 273 68.9
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 1.2e-104 383.6 281 65.8
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.6e-104 383.3 277 68.6
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 2.1e-104 382.9 275 69.5
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 3.6e-104 382.1 273 68.5
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 3.6e-104 382.1 279 69.5
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 4.6e-104 381.7 277 68.6
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 1.0e-103 380.6 272 67.6
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 1.4e-103 380.2 276 66.3
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.8e-103 379.8 273 69.2
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 3.0e-103 379.0 277 67.9
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 3.9e-103 378.6 276 65.9
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 6.7e-103 377.9 278 65.8
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 6.7e-103 377.9 286 65.4
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 8.8e-103 377.5 234 75.2
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 1.1e-102 377.1 272 68.0
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 3.3e-102 375.6 272 69.5
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 4.3e-102 375.2 237 78.5
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 7.4e-102 374.4 275 66.5
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 1.3e-101 373.6 275 66.2
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.7e-101 373.2 272 64.0
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 6.3e-101 371.3 282 63.8
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 6.3e-101 371.3 273 68.9
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 6.3e-101 371.3 282 63.8
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 6.3e-101 371.3 275 64.7
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.4e-100 370.2 282 63.5
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 2.4e-100 369.4 282 63.8
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 2.4e-100 369.4 278 64.4
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 4.1e-100 368.6 273 65.2
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 5.3e-100 368.2 304 62.5
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 5.3e-100 368.2 282 63.8
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 6.9e-100 367.9 281 62.6
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 6.9e-100 367.9 273 64.5
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 6.9e-100 367.9 272 64.3
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 9.1e-100 367.5 282 63.1
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 9.1e-100 367.5 282 63.1
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.5e-99 366.7 283 64.3
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 2.0e-99 366.3 282 63.1
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 2.0e-99 366.3 282 62.8
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 2.0e-99 366.3 282 62.8
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 2.6e-99 365.9 268 67.5
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 2.6e-99 365.9 274 65.3
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 2.6e-99 365.9 233 75.5
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 3.4e-99 365.5 284 62.7
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 4.5e-99 365.2 268 66.0
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 7.7e-99 364.4 282 62.8
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.0e-98 364.0 280 61.4
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 1.3e-98 363.6 284 62.7
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.7e-98 363.2 291 60.8
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 3.8e-98 362.1 284 60.6
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 3.8e-98 362.1 284 60.6
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 6.5e-98 361.3 281 59.8
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 1.4e-97 360.1 282 60.6
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 1.4e-97 360.1 283 60.8
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 1.4e-97 360.1 282 60.6
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 1.4e-97 360.1 283 60.8
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 4.2e-97 358.6 275 63.6
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 5.5e-97 358.2 283 60.4
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 7.2e-97 357.8 281 61.2
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 7.2e-97 357.8 277 64.3
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 9.4e-97 357.5 281 60.9
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 9.4e-97 357.5 282 59.9
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 1.2e-96 357.1 275 66.9
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 2.1e-96 356.3 274 62.4
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 2.1e-96 356.3 274 62.4
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 4.7e-96 355.1 281 60.1
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 6.1e-96 354.8 281 60.9
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 6.1e-96 354.8 235 71.1
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 3.0e-95 352.4 275 62.2
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 6.7e-95 351.3 273 64.5
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 2.0e-94 349.7 272 64.0
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 1.4e-92 343.6 270 60.4
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 3.8e-90 335.5 277 59.9
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 1.2e-88 330.5 274 59.1
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 5.7e-86 321.6 243 65.0
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 8.2e-85 317.8 253 60.5
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 8.2e-85 317.8 272 61.0
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-84 317.0 272 60.3
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 4.1e-84 315.5 246 64.6
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 9.4e-81 304.3 282 54.3
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.6e-80 303.5 222 61.3
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 3.0e-79 299.3 273 55.3
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 2.2e-77 293.1 185 74.1
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 1.9e-73 280.0 179 77.1
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 2.3e-71 273.1 198 65.7
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 2.2e-69 266.5 240 52.9
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 4.1e-68 262.3 195 63.1
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 3.8e-66 255.8 156 82.7
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 1.4e-63 247.3 154 78.6
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 4.1e-60 235.7 235 47.2
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 9.2e-60 234.6 186 60.8
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 1.0e-58 231.1 281 42.7
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 8.0e-56 221.5 155 65.8
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 4.9e-53 212.2 241 48.1
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 6.2e-48 195.3 172 59.3
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 3.4e-46 189.5 216 46.3
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 4.6e-43 179.1 235 40.0
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 7.3e-41 171.8 137 64.2
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 1.6e-40 170.6 137 63.5
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 1.6e-40 170.6 137 63.5
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.1e-27 127.1 179 40.8
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 4.6e-27 125.9 113 54.0
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-23 113.2 117 45.3
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 4.3e-17 92.8 74 55.4


User provided reference genes

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