Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 0.0e+00 1485.3 810 100.0
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 2.0e-296 1022.3 812 71.8
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 1.0e-271 940.3 816 67.6
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 3.0e-260 902.1 814 63.9
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 3.4e-251 872.1 814 63.5
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 9.8e-251 870.5 812 63.5
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 5.4e-249 864.8 810 64.2
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.6e-248 863.2 811 64.4
PSO170G3080 Papaver somniferum HOM05D003721 ORTHO05D004303 3.5e-248 862.1 811 64.1
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 3.3e-246 855.5 810 63.1
MBI07_g11740_MAGBIO Magnolia biondii HOM05D003721 ORTHO05D004303 4.0e-244 848.6 822 63.6
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 7.5e-243 844.3 810 62.5
TWI59G1183 Tripterygium wilfordii HOM05D003721 ORTHO05D004303 1.4e-241 840.1 812 62.2
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 3.2e-241 839.0 817 62.2
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 1.2e-237 827.0 808 62.1
PSO063G0643 Papaver somniferum HOM05D003721 ORTHO05D004303 1.2e-237 827.0 811 62.0
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 1.6e-237 826.6 820 61.8
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 2.1e-237 826.2 810 61.1
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 2.6e-235 819.3 812 60.3
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 2.2e-234 816.2 727 65.3
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 3.5e-232 808.9 811 60.3
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 2.4e-228 796.2 824 60.8
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 2.4e-228 796.2 949 53.6
CiPaw.01G068800 Carya illinoinensis HOM05D003721 ORTHO05D004303 1.4e-225 786.9 813 59.9
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 5.1e-223 778.5 854 57.4
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 6.6e-223 778.1 843 58.0
Actinidia20169 Actinidia chinensis HOM05D003721 ORTHO05D004303 6.6e-215 751.5 812 57.6
Aqoxy5G04062 Aquilegia oxysepala HOM05D003721 ORTHO05D004303 2.8e-213 746.1 828 56.4
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.1e-212 744.2 817 56.4
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 1.3e-210 737.3 816 57.0
Gohir.A11G093000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.0e-207 727.6 790 57.0
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 3.9e-207 725.7 848 54.4
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 2.5e-206 723.0 817 55.4
FAN03G0785 Fragaria x ananassa HOM05D003721 ORTHO05D004303 3.3e-206 722.6 818 56.1
Gohir.D12G110000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.3e-205 720.7 810 56.3
RcHm_v2.0_Chr1g0357861 Rosa chinensis HOM05D003721 ORTHO05D004303 3.1e-204 716.1 819 55.3
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 5.3e-204 715.3 817 55.8
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 1.2e-203 714.1 819 55.8
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 3.4e-203 712.6 814 56.9
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 5.8e-203 711.8 818 55.5
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 1.7e-202 710.3 838 54.3
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 1.6e-200 703.7 815 55.8
FAN10G1794 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.3e-199 700.7 816 55.3
FvH4_7g15532 Fragaria vesca HOM05D003721 ORTHO05D004303 3.0e-199 699.5 818 54.9
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 8.7e-199 698.0 815 55.8
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.5e-198 697.2 816 55.0
FAN06G3247 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.9e-198 696.8 818 54.8
DCAR_008641 Daucus carota HOM05D003721 ORTHO05D004303 2.5e-198 696.4 826 55.1
FAN10G1929 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.3e-198 695.7 818 54.6
Cc02_g38690 Coffea canephora HOM05D003721 ORTHO05D004303 7.4e-198 694.9 810 53.3
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 9.6e-198 694.5 818 54.4
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 8.2e-197 691.4 816 52.5
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 1.1e-196 691.0 812 53.6
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 1.0e-194 684.5 828 53.7
AUR62004419 Chenopodium quinoa HOM05D003721 ORTHO05D004303 6.5e-194 681.8 793 54.5
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 6.5e-194 681.8 814 54.7
Gohir.A12G106100 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.2e-193 679.5 810 54.1
FAN06G4946 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.2e-193 679.1 842 52.9
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 1.2e-192 677.6 816 53.7
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 6.1e-192 675.2 814 54.5
PGR031G3178 Punica granatum HOM05D003721 ORTHO05D004303 3.0e-191 672.9 813 54.5
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 1.5e-190 670.6 822 53.4
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 1.1e-188 664.5 810 53.2
Hund16678 Selenicereus undatus HOM05D003721 ORTHO05D004303 9.0e-188 661.4 794 54.2
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 4.5e-187 659.1 720 56.0
Eucgr.D02329 Eucalyptus grandis HOM05D003721 ORTHO05D004303 7.7e-187 658.3 802 53.0
Sed0001790 Sechium edule HOM05D003721 ORTHO05D004303 7.7e-187 658.3 822 53.6
AUR62022625 Chenopodium quinoa HOM05D003721 ORTHO05D004303 8.5e-186 654.8 793 52.7
CAN.G78.136 Capsicum annuum HOM05D003721 ORTHO05D004303 2.5e-185 653.3 818 53.3
EL10Ac1g00346 Beta vulgaris HOM05D003721 ORTHO05D004303 1.6e-184 650.6 799 53.1
ATR1093G009 Amborella trichopoda HOM05D003721 ORTHO05D004303 1.4e-183 647.5 824 50.7
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 1.8e-183 647.1 817 52.3
Sc23g0002500 Simmondsia chinensis HOM05D003721 ORTHO05D004303 3.9e-183 646.0 812 53.3
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 4.3e-182 642.5 818 53.3
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 1.2e-179 634.4 813 51.0
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 1.3e-178 630.9 619 62.0
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.3e-178 630.9 815 52.6
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 2.9e-178 629.8 619 62.0
Gorai.008G119300 Gossypium raimondii HOM05D003721 ORTHO05D004303 2.9e-178 629.8 811 51.9
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 1.4e-175 620.9 814 51.0
ClCG06G003380 Citrullus lanatus HOM05D003721 ORTHO05D004303 7.4e-174 615.1 882 48.6
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.3e-173 614.4 814 51.0
Ah.05g180090 Amaranthus hybridus HOM05D003721 ORTHO05D004303 1.7e-173 614.0 794 51.3
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 2.2e-173 613.6 815 51.2
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 6.3e-173 612.1 816 50.7
Cpa.g.sc11.59 Carica papaya HOM05D003721 ORTHO05D004303 3.8e-170 602.8 532 66.4
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 3.2e-169 599.7 819 49.5
Migut.B01806 Erythranthe guttata HOM05D003721 ORTHO05D004303 8.0e-168 595.1 819 49.1
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 1.8e-167 594.0 643 57.2
CDE02G2110 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 2.6e-166 590.1 807 47.8
TPR.G18168 Trifolium pratense HOM05D003721 ORTHO05D004303 6.3e-165 585.5 838 49.5
Medtr8g028445 Medicago truncatula HOM05D003721 ORTHO05D004303 6.5e-162 575.5 818 48.5
HanXRQChr06g0166991 Helianthus annuus HOM05D003721 ORTHO05D004303 5.5e-161 572.4 720 52.6
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.6e-160 569.7 630 57.1
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 4.0e-159 566.2 812 47.7
CDE08G1001 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 7.0e-156 555.4 807 46.6
HPP92_023080 Vanilla planifolia HOM05D003721 ORTHO05D004303 7.7e-155 552.0 815 48.1
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 3.2e-153 546.6 835 47.1
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 4.2e-153 546.2 812 47.0
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 7.2e-153 545.4 811 45.5
SalBow3G1665 Salvia bowleyana HOM05D003721 ORTHO05D004303 1.0e-151 541.6 813 47.4
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 6.8e-151 538.9 815 46.3
MSTRG.20868 Avicennia marina HOM05D003721 ORTHO05D004303 2.6e-150 537.0 816 47.1
MELO3C021177.2 Cucumis melo HOM05D003721 ORTHO05D004303 2.6e-150 537.0 721 51.9
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 9.8e-150 535.0 763 47.2
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 4.5e-147 526.2 876 43.9
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 2.9e-146 523.5 782 47.8
Lalb_Chr04g0259321 Lupinus albus HOM05D003721 ORTHO05D004303 5.6e-145 519.2 511 61.4
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 1.4e-143 514.6 813 44.8
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 1.4e-143 514.6 813 44.8
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 4.0e-143 513.1 753 47.7
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 5.2e-143 512.7 813 44.6
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 3.4e-142 510.0 811 44.6
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 1.1e-140 505.0 811 44.4
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 5.4e-140 502.7 752 45.1
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 3.5e-139 500.0 711 46.3
Zm00001eb042060 Zea mays HOM05D003721 ORTHO05D004303 3.5e-139 500.0 770 45.6
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 1.7e-138 497.7 764 45.3
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 2.5e-137 493.8 822 44.5
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 7.3e-137 492.3 718 45.7
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 1.2e-136 491.5 760 44.6
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 4.0e-135 486.5 809 44.1
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 8.9e-135 485.3 715 45.3
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 8.9e-135 485.3 766 45.3
unitig_52.g17061 Utricularia gibba HOM05D003721 ORTHO05D004303 6.4e-133 479.2 756 45.9
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 1.1e-132 478.4 762 44.5
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 1.6e-131 474.6 683 46.4
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 2.0e-131 474.2 710 44.4
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 5.0e-130 469.5 616 49.4
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 1.7e-125 454.5 722 44.5
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 2.2e-125 454.1 815 41.3
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 4.4e-118 429.9 815 41.2
Mapoly0053s0042 Marchantia polymorpha HOM05D003721 ORTHO05D004303 2.7e-115 420.6 827 40.3
SEGI_16602 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 8.7e-106 389.0 378 60.1
Os08g0386900 Oryza sativa ssp. japonica HOM05D003721 ORTHO05D004303 1.3e-104 385.2 386 60.1
PGSC0003DMG400000197 Solanum tuberosum HOM05D003721 ORTHO05D004303 1.6e-104 384.8 388 61.1
CARHR141460 Cardamine hirsuta HOM05D003721 ORTHO05D004303 9.0e-103 379.0 507 49.1
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 7.9e-99 365.9 379 58.3
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 1.6e-96 358.2 727 39.2
TPR.G35781 Trifolium pratense HOM05D003721 ORTHO05D004303 3.2e-84 317.4 345 55.9
Pp3c3_18730 Physcomitrium patens HOM05D003721 ORTHO05D004303 4.4e-65 253.8 797 32.0
Pp3c12_14500 Physcomitrium patens HOM05D003721 ORTHO05D004303 7.4e-65 253.1 376 45.5
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 9.1e-63 246.1 416 44.0
Actinidia10078 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.6e-62 244.6 435 42.5
QL01p002178 Quercus lobata HOM05D003721 ORTHO05D004303 5.0e-61 240.4 341 50.1
BcaC07g40657 Brassica carinata HOM05D003721 ORTHO05D004303 7.9e-59 233.0 264 54.9
Haze_15579 Corylus avellana HOM05D003721 ORTHO05D004303 1.4e-55 222.2 201 65.2
AagrBONN_evm.TU.Sc2ySwM_369.3 Anthoceros agrestis HOM05D003721 ORTHO05D004303 1.3e-48 199.1 324 40.4
Haze_15574 Corylus avellana HOM05D003721 ORTHO05D004303 2.5e-44 184.9 181 60.8
arahy.Tifrunner.gnm1.ann1.LL4IHI Arachis hypogaea HOM05D003721 ORTHO05D004303 2.9e-37 161.4 142 60.6
SEGI_39264 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 1.9e-36 158.7 410 32.9
BcaC08g45231 Brassica carinata HOM05D003721 ORTHO05D004303 4.1e-31 141.0 138 58.0
SGA_v2.0_scaffold4G02274 Striga asiatica HOM05D003721 ORTHO05D004303 1.9e-28 132.1 183 50.3
Cpa.g.sc11.56 Carica papaya HOM05D003721 ORTHO05D004303 2.5e-28 131.7 104 72.1
Actinidia37723 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.4e-26 125.9 202 43.6
Lalb_Chr04g0259331 Lupinus albus HOM05D003721 ORTHO05D004303 4.4e-25 120.9 287 35.9
SHI13345 Sapria himalayana HOM05D003721 ORTHO05D004303 5.4e-23 114.0 118 55.1
Actinidia10079 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.3e-18 98.6 84 64.3
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 6.8e-18 97.1 106 53.8
MCO16G164 Micromonas commoda HOM05D003721 ORTHO05D004303 1.5e-17 95.9 315 30.2
BcaC08g45137 Brassica carinata HOM05D003721 ORTHO05D004303 1.7e-16 92.4 340 30.3
Actinidia21288 Actinidia chinensis HOM05D003721 ORTHO05D004303 3.7e-16 91.3 62 74.2
Actinidia10077 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.4e-15 88.6 164 44.5
CBR_g40304 Chara braunii HOM05D001539 ORTHO05D000937 2.0e-14 85.5 172 40.7
Cre12.g495800 Chlamydomonas reinhardtii HOM05D003721 ORTHO05D004303 4.6e-14 84.3 203 32.5
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.9e-13 81.3 74 59.5
BcaC07g40658 Brassica carinata HOM05D003721 ORTHO05D004303 1.4e-10 72.8 262 32.1
Rhsim05G0209700 Rhododendron simsii HOM05D003721 ORTHO05D004303 2.6e-09 68.6 74 51.4
Rhsim11G0030600 Rhododendron simsii HOM05D003721 ORTHO05D004303 5.8e-09 67.4 74 51.4
Carub.0005s2826 Capsella rubella HOM05D003721 ORTHO05D004303 2.4e-07 62.0 262 27.5
CBR_g40298 Chara braunii HOM05D003721 ORTHO05D004303 3.2e-07 61.6 382 22.3
SHI13346 Sapria himalayana HOM05D003721 ORTHO05D004303 3.5e-06 58.2 124 37.1


User provided reference genes

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