Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3136 Trochodendron aralioides HOM05D009991 ORTHO05D011409 1.2e-71 273.1 142 100.0
Nn1g07681 Nelumbo nucifera HOM05D021029 ORTHO05D011409 3.7e-36 155.2 127 63.8
CiPaw.09G112400 Carya illinoinensis HOM05D009991 ORTHO05D011409 1.6e-23 113.2 153 50.3
MBI15_g35686_MAGBIO Magnolia biondii HOM05D020207 ORTHO05D022893 6.8e-22 107.8 146 47.3
Cfa000004 Carpinus fangiana HOM05D009991 ORTHO05D011409 5.7e-21 104.8 157 43.3
QL05p066356 Quercus lobata HOM05D009991 ORTHO05D011409 1.2e-18 97.1 155 45.2
CANSAT56G4091 Cannabis sativa HOM05D009991 ORTHO05D011409 4.5e-18 95.1 99 51.5
Cpa.g.sc27.192 Carica papaya HOM05D009991 ORTHO05D011409 4.5e-18 95.1 157 40.1
CiPaw.10G084400 Carya illinoinensis HOM05D009991 ORTHO05D011409 6.5e-17 91.3 160 40.6
MD10G1341800 Malus domestica HOM05D026675 ORTHO05D011409 1.5e-13 80.1 129 41.1
Prupe.4G001400 Prunus persica HOM05D026675 ORTHO05D011409 5.7e-13 78.2 130 39.2
TWI63G0729 Tripterygium wilfordii HOM05D009991 ORTHO05D011409 1.7e-12 76.6 140 37.1
VMungo0540G1391 Vigna mungo HOM05D009991 ORTHO05D011409 4.1e-11 72.0 161 36.6
Glyma.09G016900 Glycine max HOM05D009991 ORTHO05D011409 9.2e-11 70.9 126 42.1
HPP92_018913 Vanilla planifolia HOM05D020207 ORTHO05D022893 9.2e-11 70.9 142 40.8
ClCG01G021060 Citrullus lanatus HOM05D021029 ORTHO05D011409 2.7e-10 69.3 99 44.4
Sed0015901 Sechium edule HOM05D021029 ORTHO05D011409 4.5e-10 68.6 93 41.9
Lj4g0010151 Lotus japonicus HOM05D009991 ORTHO05D011409 5.9e-10 68.2 102 41.2
Glyma.17G004050 Glycine max HOM05D000015 ORTHO05D000984 1.0e-09 67.4 143 37.1
MELO3C007992.2 Cucumis melo HOM05D021029 ORTHO05D011409 2.9e-09 65.9 98 41.8
Phvul.006G135200 Phaseolus vulgaris HOM05D009991 ORTHO05D011409 3.8e-09 65.5 156 37.8
Glyma.15G122500 Glycine max HOM05D009991 ORTHO05D011409 6.6e-09 64.7 150 37.3
Manes.09G072700 Manihot esculenta HOM05D009991 ORTHO05D011409 6.6e-09 64.7 116 37.9
CsaV3_6G048060 Cucumis sativus L. HOM05D021029 ORTHO05D011409 1.1e-08 63.9 95 41.1
Thecc.06G243600 Theobroma cacao HOM05D009991 ORTHO05D011409 2.5e-08 62.8 137 35.0
Lj6g0001356 Lotus japonicus HOM05D009991 ORTHO05D011409 3.3e-08 62.4 118 37.3
Phvul.003G089000 Phaseolus vulgaris HOM05D009991 ORTHO05D011409 5.6e-08 61.6 145 38.6
CSS0025740 Camellia sinensis var. sinensis HOM05D026581 ORTHO05D015213 3.6e-07 58.9 155 34.2
Atru.chr1.2234 Acer truncatum HOM05D009991 ORTHO05D011409 1.0e-06 57.4 121 33.1
HPP92_022815 Vanilla planifolia HOM05D020207 ORTHO05D022893 3.0e-06 55.8 144 34.0
Migut.H01636 Erythranthe guttata HOM05D023490 ORTHO05D015213 6.8e-06 54.7 142 34.5
Eucgr.D00961 Eucalyptus grandis HOM05D021029 ORTHO05D015213 6.8e-06 54.7 102 39.2
arahy.Tifrunner.gnm1.ann1.LL1TW1 Arachis hypogaea HOM05D009991 ORTHO05D011409 8.9e-06 54.3 103 35.0


User provided reference genes

Program Settings