Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3132 Trochodendron aralioides HOM05D001982 ORTHO05D008035 4.4e-49 197.6 96 100.0
TAR371G0897 Trochodendron aralioides HOM05D001982 ORTHO05D008035 1.4e-42 176.0 96 89.6
GSVIVG01029333001 Vitis vinifera HOM05D001982 ORTHO05D008035 4.9e-40 167.5 94 84.0
Cc04_g08460 Coffea canephora HOM05D001982 ORTHO05D008035 3.2e-39 164.9 94 79.8
Cfa021434 Carpinus fangiana HOM05D001982 ORTHO05D008035 4.1e-39 164.5 95 83.2
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 4.1e-39 164.5 95 83.2
PSO063G1521 Papaver somniferum HOM05D001982 ORTHO05D008035 1.6e-38 162.5 96 81.2
Dinv09728 Davidia involucrata HOM05D001982 ORTHO05D008035 2.0e-38 162.2 96 80.2
Gohir.D11G319900 Gossypium hirsutum HOM05D001982 ORTHO05D008035 2.0e-38 162.2 96 77.1
Gorai.007G350000 Gossypium raimondii HOM05D001982 ORTHO05D008035 2.0e-38 162.2 96 77.1
QL10p034062 Quercus lobata HOM05D001982 ORTHO05D008035 2.7e-38 161.8 95 81.1
Atru.chr9.94 Acer truncatum HOM05D001982 ORTHO05D008035 3.5e-38 161.4 96 78.1
PSO782G2505 Papaver somniferum HOM05D001982 ORTHO05D008035 4.5e-38 161.0 96 80.2
COL.COLO4_24905 Corchorus olitorius HOM05D001982 ORTHO05D008035 7.8e-38 160.2 96 74.0
Gohir.A11G304500 Gossypium hirsutum HOM05D001982 ORTHO05D008035 7.8e-38 160.2 96 75.0
ATR0618G229 Amborella trichopoda HOM05D001982 ORTHO05D008035 1.3e-37 159.5 96 75.0
Lj9A413T50 Lonicera japonica HOM05D001982 ORTHO05D008035 1.3e-37 159.5 96 77.1
Thecc.05G197300 Theobroma cacao HOM05D001982 ORTHO05D008035 1.3e-37 159.5 96 74.0
Ciclev10018888m.g Citrus clementina HOM05D001982 ORTHO05D008035 2.9e-37 158.3 96 75.0
arahy.Tifrunner.gnm1.ann1.60FNUJ Arachis hypogaea HOM05D001982 ORTHO05D008035 8.6e-37 156.8 94 75.5
CSS0020955 Camellia sinensis var. sinensis HOM05D001982 ORTHO05D008035 8.6e-37 156.8 93 80.6
PGR083G0482 Punica granatum HOM05D001982 ORTHO05D008035 8.6e-37 156.8 94 75.5
Eucgr.H00644 Eucalyptus grandis HOM05D001982 ORTHO05D008035 1.1e-36 156.4 96 74.0
Prupe.5G243600 Prunus persica HOM05D001982 ORTHO05D008035 1.1e-36 156.4 96 76.0
MD14G1245800 Malus domestica HOM05D001982 ORTHO05D008035 1.9e-36 155.6 96 72.9
Rhsim08G0124900 Rhododendron simsii HOM05D001982 ORTHO05D008035 1.9e-36 155.6 94 76.6
TPR.G19890 Trifolium pratense HOM05D001982 ORTHO05D008035 1.9e-36 155.6 93 77.4
HanXRQChr16g0503331 Helianthus annuus HOM05D001982 ORTHO05D008035 3.3e-36 154.8 93 77.4
Aqoxy3G04303 Aquilegia oxysepala HOM05D001982 ORTHO05D008035 4.3e-36 154.5 93 79.6
Potri.015G028101 Populus trichocarpa HOM05D001982 ORTHO05D008035 4.3e-36 154.5 96 77.1
Hma1.2p1_0493F.1_g164870 Hydrangea macrophylla HOM05D001982 ORTHO05D008035 7.3e-36 153.7 93 78.5
Ca_11834_v3 Cicer arietinum L. HOM05D001982 ORTHO05D008035 9.5e-36 153.3 93 74.2
Manes.02G218300 Manihot esculenta HOM05D001982 ORTHO05D008035 9.5e-36 153.3 96 75.0
Sc04g0004660 Simmondsia chinensis HOM05D001982 ORTHO05D008035 2.8e-35 151.8 95 71.6
RcHm_v2.0_Chr7g0177091 Rosa chinensis HOM05D001982 ORTHO05D008035 3.6e-35 151.4 96 76.0
MD06G1239700 Malus domestica HOM05D001982 ORTHO05D008035 4.7e-35 151.0 96 71.9
Nn3g16143 Nelumbo nucifera HOM05D001982 ORTHO05D008035 4.7e-35 151.0 96 71.9
Nn4g26692 Nelumbo nucifera HOM05D001982 ORTHO05D008035 4.7e-35 151.0 96 71.9
CiPaw.16G073000 Carya illinoinensis HOM05D001982 ORTHO05D008035 6.1e-35 150.6 96 75.0
FvH4_5g18390 Fragaria vesca HOM05D001982 ORTHO05D008035 6.1e-35 150.6 96 75.0
Psat1g121960 Pisum sativum HOM05D001982 ORTHO05D008035 6.1e-35 150.6 93 72.0
Lj2g0027511 Lotus japonicus HOM05D001982 ORTHO05D008035 8.0e-35 150.2 94 75.5
Medtr6g077830 Medicago truncatula HOM05D001982 ORTHO05D008035 8.0e-35 150.2 93 74.2
Peaxi162Scf00171g00246 Petunia axillaris HOM05D001982 ORTHO05D008035 1.0e-34 149.8 96 74.0
Ah.11g047950 Amaranthus hybridus HOM05D001982 ORTHO05D008035 1.4e-34 149.4 96 70.8
Nitab4.5_0003040g0110 Nicotiana tabacum HOM05D001982 ORTHO05D008035 1.4e-34 149.4 96 74.0
Sabra15G0023200 Salix brachista HOM05D001982 ORTHO05D008035 1.4e-34 149.4 93 75.3
AUR62021583 Chenopodium quinoa HOM05D001982 ORTHO05D008035 1.8e-34 149.1 96 69.8
Lalb_Chr22g0353981 Lupinus albus HOM05D001982 ORTHO05D008035 1.8e-34 149.1 94 71.3
Nitab4.5_0000782g0080 Nicotiana tabacum HOM05D001982 ORTHO05D008035 1.8e-34 149.1 96 74.0
Oeu038398.1 Olea europaea HOM05D001982 ORTHO05D008035 1.8e-34 149.1 96 70.8
EL10Ac5g11111 Beta vulgaris HOM05D001982 ORTHO05D008035 2.3e-34 148.7 96 69.8
AUR62008507 Chenopodium quinoa HOM05D001982 ORTHO05D008035 2.3e-34 148.7 96 69.8
Duzib128G1857 Durio zibethinus HOM05D001982 ORTHO05D008035 2.3e-34 148.7 96 71.9
FAN13G2897 Fragaria x ananassa HOM05D001982 ORTHO05D008035 2.3e-34 148.7 96 74.0
CDE04G2352 Ceratophyllum demersum HOM05D001982 ORTHO05D008035 3.1e-34 148.3 94 70.2
Lalb_Chr24g0398561 Lupinus albus HOM05D001982 ORTHO05D008035 3.1e-34 148.3 95 70.5
Potri.012G035900 Populus trichocarpa HOM05D001982 ORTHO05D008035 3.1e-34 148.3 93 76.3
Sabra12G0024600 Salix brachista HOM05D001982 ORTHO05D008035 3.1e-34 148.3 96 74.0
SEGI_09403 Sequoiadendron giganteum HOM05D001982 ORTHO05D008035 3.1e-34 148.3 96 69.8
SEGI_16116 Sequoiadendron giganteum HOM05D001982 ORTHO05D008035 3.1e-34 148.3 96 69.8
ECA232G1526 Erigeron canadensis HOM05D001982 ORTHO05D008035 4.0e-34 147.9 96 70.8
Lalb_Chr14g0370231 Lupinus albus HOM05D001982 ORTHO05D008035 4.0e-34 147.9 94 69.1
arahy.Tifrunner.gnm1.ann1.RQR8UB Arachis hypogaea HOM05D001982 ORTHO05D008035 5.2e-34 147.5 87 77.0
TWI15G0476 Tripterygium wilfordii HOM05D001982 ORTHO05D008035 5.2e-34 147.5 96 72.9
Hund02599 Selenicereus undatus HOM05D001982 ORTHO05D008035 6.8e-34 147.1 93 73.1
PGSC0003DMG400010151 Solanum tuberosum HOM05D001982 ORTHO05D008035 6.8e-34 147.1 96 72.9
CAN.G929.22 Capsicum annuum HOM05D001982 ORTHO05D008035 1.2e-33 146.4 96 72.9
Migut.O00266 Erythranthe guttata HOM05D001982 ORTHO05D008035 2.0e-33 145.6 94 69.1
Glyma.16G213100 Glycine max HOM05D001982 ORTHO05D008035 4.4e-33 144.4 95 68.4
Solyc03g098610.3 Solanum lycopersicum HOM05D001982 ORTHO05D008035 4.4e-33 144.4 96 71.9
Sopen03g029320 Solanum pennellii HOM05D001982 ORTHO05D008035 4.4e-33 144.4 96 71.9
Thhalv10020089m.g Eutrema salsugineum HOM05D001982 ORTHO05D008035 5.8e-33 144.1 92 72.8
FAN04G2680 Fragaria x ananassa HOM05D001982 ORTHO05D008035 7.5e-33 143.7 96 75.0
Glyma.09G164700 Glycine max HOM05D001982 ORTHO05D008035 9.8e-33 143.3 91 69.2
ClCG08G001990 Citrullus lanatus HOM05D001982 ORTHO05D008035 1.3e-32 142.9 96 67.7
Aa31LG8G5970 Aethionema arabicum HOM05D001982 ORTHO05D008035 1.7e-32 142.5 92 69.6
SGA_v2.0_scaffold90G27748 Striga asiatica HOM05D001982 ORTHO05D008035 1.7e-32 142.5 96 68.8
Carub.0003s1900 Capsella rubella HOM05D001982 ORTHO05D008035 2.9e-32 141.7 92 70.7
CARHR094580 Cardamine hirsuta HOM05D001982 ORTHO05D008035 2.9e-32 141.7 92 70.7
CsaV3_6G002460 Cucumis sativus L. HOM05D001982 ORTHO05D008035 2.9e-32 141.7 96 66.7
DCAR_023244 Daucus carota HOM05D001982 ORTHO05D008035 2.9e-32 141.7 93 71.0
Lsat_1_v5_gn_0_10501 Lactuca sativa HOM05D001982 ORTHO05D008035 2.9e-32 141.7 96 65.6
Phvul.004G139200 Phaseolus vulgaris HOM05D001982 ORTHO05D008035 3.7e-32 141.4 95 65.3
THA.LOC104818545 Tarenaya hassleriana HOM05D001982 ORTHO05D008035 3.7e-32 141.4 92 68.5
AL3G32550 Arabidopsis lyrata HOM05D001982 ORTHO05D008035 4.9e-32 141.0 92 70.7
Hund09878 Selenicereus undatus HOM05D001982 ORTHO05D008035 6.4e-32 140.6 87 74.7
MSTRG.23211 Avicennia marina HOM05D001982 ORTHO05D008035 8.3e-32 140.2 91 69.2
C05p46060 Brassica napus HOM05D001982 ORTHO05D008035 1.4e-31 139.4 93 72.0
BolC5t33333H Brassica oleracea HOM05D001982 ORTHO05D008035 1.4e-31 139.4 93 72.0
BraA05t21885Z Brassica rapa HOM05D001982 ORTHO05D008035 1.4e-31 139.4 93 72.0
VMungo0464G1225 Vigna mungo HOM05D001982 ORTHO05D008035 1.4e-31 139.4 95 64.2
AT3G19180 Arabidopsis thaliana HOM05D001982 ORTHO05D008035 2.4e-31 138.7 92 69.6
A05p30460 Brassica napus HOM05D001982 ORTHO05D008035 4.1e-31 137.9 93 71.0
Sp3g17250 Schrenkiella parvula HOM05D001982 ORTHO05D008035 5.4e-31 137.5 92 70.7
Sed0006637 Sechium edule HOM05D001982 ORTHO05D008035 5.4e-31 137.5 91 68.1
CANSAT64G0368 Cannabis sativa HOM05D001982 ORTHO05D008035 9.2e-31 136.7 93 72.0
BcaB06g25974 Brassica carinata HOM05D001982 ORTHO05D008035 1.2e-30 136.3 93 68.8
SalBow5G3030 Salvia bowleyana HOM05D001982 ORTHO05D008035 4.6e-30 134.4 101 62.4
unitig_26.g10113 Utricularia gibba HOM05D001982 ORTHO05D008035 1.5e-28 129.4 94 63.8
Zm00001eb066330 Zea mays HOM05D001982 ORTHO05D008035 1.2e-27 126.3 97 64.9
CSS0021616 Camellia sinensis var. sinensis HOM05D001982 ORTHO05D008035 6.4e-24 114.0 67 83.6
HPP92_022060 Vanilla planifolia HOM05D001982 ORTHO05D008035 1.4e-23 112.8 93 55.9
FAN18G1706 Fragaria x ananassa HOM05D001982 ORTHO05D008035 1.1e-20 103.2 67 77.6
Cpa.g.c41191 Carica papaya HOM05D001982 ORTHO05D008035 9.5e-20 100.1 67 71.6
Os04g0675800 Oryza sativa ssp. japonica HOM05D001982 ORTHO05D008035 1.2e-19 99.8 69 73.9
FAN08G1981 Fragaria x ananassa HOM05D001982 ORTHO05D008035 3.6e-19 98.2 65 76.9
MELO3C025039.2 Cucumis melo HOM05D001982 ORTHO05D008035 1.8e-18 95.9 64 68.8
vmacro17745 Vaccinium macrocarpon HOM05D001982 ORTHO05D008035 1.8e-18 95.9 59 74.6
CDE07G0075 Ceratophyllum demersum HOM05D001982 ORTHO05D008035 4.4e-17 91.3 63 61.9
Sc04g0004530 Simmondsia chinensis HOM05D001982 ORTHO05D008035 4.1e-15 84.7 58 72.4
CBR_g40437 Chara braunii HOM05D005397 ORTHO05D006493 8.4e-08 60.5 92 35.9
CBR_g40449 Chara braunii HOM05D005397 ORTHO05D006493 8.4e-08 60.5 92 35.9
Pp3c21_1260 Physcomitrium patens HOM05D005397 ORTHO05D006493 1.9e-07 59.3 92 39.1


User provided reference genes

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