Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.7e-181 638.6 344 100.0
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.0e-140 503.8 344 79.7
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 1.0e-132 477.2 344 76.7
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.1e-129 467.2 348 71.0
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 5.8e-128 461.5 344 75.0
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.1e-126 457.2 345 69.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 1.2e-125 453.8 318 76.4
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 5.7e-123 444.9 344 67.4
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 8.2e-122 441.0 344 68.3
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 2.2e-119 433.0 351 64.4
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 6.5e-119 431.4 348 66.1
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.4e-118 430.3 360 64.7
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.7e-117 426.0 340 66.2
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 7.9e-117 424.5 350 64.3
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.9e-115 419.9 450 53.3
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 2.5e-115 419.5 346 64.5
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 1.4e-113 413.7 360 63.3
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 4.2e-110 402.1 301 68.4
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 4.2e-110 402.1 320 67.5
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 7.2e-110 401.4 347 62.8
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 9.4e-110 401.0 392 56.9
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 7.9e-109 397.9 482 50.4
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 8.8e-108 394.4 453 52.5
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 2.5e-107 392.9 344 69.2
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 4.3e-107 392.1 414 54.6
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 5.7e-107 391.7 392 57.4
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 9.7e-107 391.0 440 55.0
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 9.1e-105 384.4 355 60.8
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 4.5e-104 382.1 434 53.9
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 5.9e-104 381.7 346 60.4
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 5.9e-104 381.7 374 57.5
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 7.7e-104 381.3 351 60.7
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 1.3e-103 380.6 351 62.7
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 2.9e-103 379.4 330 62.7
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 3.8e-103 379.0 332 62.7
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 8.5e-103 377.9 276 77.9
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 8.5e-103 377.9 439 50.8
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 8.5e-103 377.9 483 48.2
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.4e-102 377.1 457 49.7
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 2.5e-102 376.3 476 48.5
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 7.2e-102 374.8 443 51.7
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 2.7e-101 372.9 345 58.8
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 2.7e-101 372.9 394 54.6
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 2.7e-101 372.9 472 47.9
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 3.6e-101 372.5 359 58.5
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 3.9e-100 369.0 460 49.6
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 6.7e-100 368.2 442 50.0
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 1.1e-99 367.5 358 62.6
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 4.4e-99 365.5 452 48.5
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 1.3e-98 364.0 337 59.6
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.7e-98 363.6 452 48.2
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 1.4e-97 360.5 517 45.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.8e-97 360.1 345 57.7
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 3.1e-97 359.4 365 55.6
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 5.3e-97 358.6 346 57.5
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 5.3e-97 358.6 432 49.8
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 1.6e-96 357.1 279 66.7
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 2.0e-96 356.7 374 55.1
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 7.7e-96 354.8 502 44.4
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.7e-95 353.6 479 48.9
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.9e-94 350.1 400 50.5
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 1.2e-93 347.4 281 65.1
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 2.7e-93 346.3 501 44.5
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 6.1e-93 345.1 509 44.0
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.0e-92 344.4 501 44.3
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 1.1e-91 340.9 434 48.6
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 7.5e-91 338.2 488 42.6
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 7.5e-91 338.2 488 42.6
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 9.7e-91 337.8 480 42.9
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.7e-90 335.9 498 42.0
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 4.8e-90 335.5 381 51.2
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 8.2e-90 334.7 427 49.4
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 1.1e-89 334.3 487 43.9
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 9.1e-89 331.3 471 45.0
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 1.6e-88 330.5 495 44.8
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.7e-88 329.7 489 41.9
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 3.8e-87 325.9 523 40.9
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.1e-86 324.3 346 53.8
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.2e-86 322.8 472 44.5
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 2.7e-85 319.7 438 44.1
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 8.0e-85 318.2 425 48.5
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 6.8e-84 315.1 415 45.8
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 3.4e-83 312.8 469 43.9
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 2.8e-82 309.7 387 47.8
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 2.8e-82 309.7 387 47.8
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 9.1e-81 304.7 357 51.3
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.1e-81 304.7 245 66.5
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 2.7e-80 303.1 319 52.7
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 8.5e-79 298.1 408 45.6
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 1.4e-76 290.8 409 45.2
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 3.0e-76 289.7 409 44.7
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 2.0e-75 287.0 417 44.1
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 2.6e-75 286.6 430 44.0
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.3e-74 284.3 359 47.6
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 1.7e-74 283.9 453 41.5
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.1e-73 281.2 577 35.9
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 1.4e-73 280.8 408 42.6
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 5.9e-72 275.4 376 46.3
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 7.7e-72 275.0 436 42.0
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 2.3e-71 273.5 582 35.4
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 1.1e-70 271.2 428 42.1
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 3.3e-70 269.6 452 40.9
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 7.3e-70 268.5 411 43.8
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 1.6e-69 267.3 494 37.2
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 1.6e-69 267.3 494 37.2
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.4e-68 264.2 374 43.6
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 3.0e-68 263.1 511 36.4
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 5.2e-68 262.3 439 41.5
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 6.8e-68 261.9 454 40.5
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 1.2e-67 261.2 311 49.5
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 1.5e-67 260.8 441 40.6
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.5e-67 260.8 401 42.4
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.4e-67 259.6 479 38.0
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 4.4e-67 259.2 447 41.6
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 9.2e-65 251.5 457 39.6
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 4.7e-61 239.2 376 42.6
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 3.4e-59 233.0 315 45.7
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 8.3e-58 228.4 149 79.9
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 1.6e-56 224.2 361 41.0
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.1e-52 211.5 314 45.2
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 4.0e-52 209.5 141 76.6
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 6.8e-52 208.8 143 72.7
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 9.2e-49 198.4 361 39.3
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 2.0e-43 180.6 215 51.2
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 2.5e-38 163.7 447 31.8
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 1.7e-31 141.0 114 64.0
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 9.6e-30 135.2 170 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 1.1e-28 131.7 348 30.2
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 7.6e-19 99.0 101 52.5
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 2.9e-18 97.1 74 63.5
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 3.9e-15 86.7 286 28.7
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 2.8e-13 80.5 87 48.3
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 1.4e-12 78.2 110 40.0


User provided reference genes

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